| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148663520
Identifier: 148663520
GI number: 148663520
Start: 4104585
End: 4105385
Strand: Reverse
Name: 148663520
Synonym: MRA_3692
Alternate gene names: NA
Gene position: 4105385-4104585 (Counterclockwise)
Preceding gene: 148663521
Following gene: 148663519
Centisome position: 92.88
GC content: 70.54
Gene sequence:
>801_bases ATGAGCGGTATAGCGTCCGCTGCCCTGATTTTGTCGCTTGCGCTCGTGGTGTTGCCCGGGTCGCCGCGGTGCCGCCTTAC TCCAGACGACACCGGCCGGCGGGTGCTTCTGGTCGGCGCCCGGCGGGTTGCCTGGGGTGTTGGCTGTGTCGCGGTTGGTG TGGCAGCCTTGCTACCGTTACCGACCGTTGTGGCTGTCGCGGTGCTGGGCGCAACACTCGGCCTGCGCTACCGCCGGCGT CGCCGCTACCTGCGCCGCAGCCGCGAGGGGCAGGCGCTGGAGGCCGCGCTTGAGCTGGTGGTGGGTGAACTGCGCGCGGG CGCCCATCCAGTCCGCGCATTCAGCATCGCGGCCGACGAGACCGGCGGCCCGGTTGCCGTTGCCTTGCGCGCGGTCGCGG CGCGGGCACGATTGGGTGCCGACGTCACGGCTGGCCTGCTCGCTGCGGCCCGATCCTCGGCGCTGCCCGCGTACTGGGAG CGGCTCGCGGTCTGCTGGCAACTGGGCAGTGATCACGGCTTGGCGATAGCCAGTTTGATGCGTGCCGCCCAACGTGATGT CGCTGAGCGGCAACGGTTCTCCGCGCGGGTGTCAGCGGGGATGGCCGGTGCCCGGGCCAGTGCGGCCATATTGGCAATCC TGCCGCTGCTCGGGGTGCTGCTTGGTCAACTGATCGGCGCCCGGCCGCTGAGCTTTCTGCTGACGGGACGCGTGGGCGGA TGGCTGCTGGTGGTCGGGCTGACACTGGCCTGCGCCGGGCTGCTGTGGTCGGACCGGATCACCGATCGGCCAGTGTTGTG A
Upstream 100 bases:
>100_bases CTGAAGGGCGGGTCCAGGCGGTGACGGTGTGGCACGCGGACCGTGGGATGAGTGACGACGCGGCCGCCCTGCACGATTTG CTGAGAAGCCGGGCATCGGC
Downstream 100 bases:
>100_bases GTGCGGCGGCGGTGTTGCTGGCCATGGCGTTGTGGCTCGGTGCCGGCCCGTCGGTGGTACGGGCGCGAGCCGGGAGGCCG CCCCGCGCGCATCGGCCACA
Product: putative transmembrane protein
Products: NA
Alternate protein names: Conserved Membrane Protein; Type II Secretion System Protein F; Conserved Transmembrane Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSGIASAALILSLALVVLPGSPRCRLTPDDTGRRVLLVGARRVAWGVGCVAVGVAALLPLPTVVAVAVLGATLGLRYRRR RRYLRRSREGQALEAALELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALPAYWE RLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGG WLLVVGLTLACAGLLWSDRITDRPVL
Sequences:
>Translated_266_residues MSGIASAALILSLALVVLPGSPRCRLTPDDTGRRVLLVGARRVAWGVGCVAVGVAALLPLPTVVAVAVLGATLGLRYRRR RRYLRRSREGQALEAALELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALPAYWE RLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGG WLLVVGLTLACAGLLWSDRITDRPVL >Mature_265_residues SGIASAALILSLALVVLPGSPRCRLTPDDTGRRVLLVGARRVAWGVGCVAVGVAALLPLPTVVAVAVLGATLGLRYRRRR RYLRRSREGQALEAALELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALPAYWER LAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGGW LLVVGLTLACAGLLWSDRITDRPVL
Specific function: Unknown
COG id: COG4965
COG function: function code U; Flp pilus assembly protein TadB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27633; Mature: 27502
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIASAALILSLALVVLPGSPRCRLTPDDTGRRVLLVGARRVAWGVGCVAVGVAALLPL CCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH PTVVAVAVLGATLGLRYRRRRRYLRRSREGQALEAALELVVGELRAGAHPVRAFSIAADE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCC TGGPVAVALRAVAARARLGADVTAGLLAAARSSALPAYWERLAVCWQLGSDHGLAIASLM CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH RAAQRDVAERQRFSARVSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH WLLVVGLTLACAGLLWSDRITDRPVL HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGIASAALILSLALVVLPGSPRCRLTPDDTGRRVLLVGARRVAWGVGCVAVGVAALLPL CHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH PTVVAVAVLGATLGLRYRRRRRYLRRSREGQALEAALELVVGELRAGAHPVRAFSIAADE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCC TGGPVAVALRAVAARARLGADVTAGLLAAARSSALPAYWERLAVCWQLGSDHGLAIASLM CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH RAAQRDVAERQRFSARVSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH WLLVVGLTLACAGLLWSDRITDRPVL HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA