| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148663519
Identifier: 148663519
GI number: 148663519
Start: 4103986
End: 4104666
Strand: Reverse
Name: 148663519
Synonym: MRA_3691
Alternate gene names: NA
Gene position: 4104666-4103986 (Counterclockwise)
Preceding gene: 148663520
Following gene: 148663518
Centisome position: 92.87
GC content: 72.39
Gene sequence:
>681_bases ATGGCTGCTGGTGGTCGGGCTGACACTGGCCTGCGCCGGGCTGCTGTGGTCGGACCGGATCACCGATCGGCCAGTGTTGT GAGTGCGGCGGCGGTGTTGCTGGCCATGGCGTTGTGGCTCGGTGCCGGCCCGTCGGTGGTACGGGCGCGAGCCGGGAGGC CGCCCCGCGCGCATCGGCCACACCAGGGGCTGCTGCTAGGGCGGACGGATGTCGCGGACCCGCTAGCCGTCGCAGCCAGC CTTGACGTGCTGGCCGTGTGTCTGGCTGCGGGGATGGCGGTGTCGACGGCCGCGGCCGCCACCGCTGCGGTCGCGCCGCC GCGGCTGGCGCGCGTGTTGCGCCGGGCCGCCGACCTGCTGGCATTGGGTGCCGACCCCAACATCGCCTGGTCGAGGCCGC CGGATTTGCCGCCGGGCACCCACGATGCGCAGACCGATGCGGTACTGCGGTTGGCACGGCGTTCGGCGGCTTCGGGCGCG GCGCTCGCCGATGGCATTGTCGAACTGGCCGTCCAGGTTCGGCACGACGCCGCACAGGCGGCCGCGGCGGCCGCCGAGCG GGCCGGTGTGCTGATCGCCGGCCCGCTGGGACTGTGCTTCTTACCGGCGTTTCTGTGTGTGGGCATTGTCCCGCTAGTAG TCGGGCTGGCCGGTGATGTCTTGCAGTTTGGCCTGGTATGA
Upstream 100 bases:
>100_bases GTGCGGCCATATTGGCAATCCTGCCGCTGCTCGGGGTGCTGCTTGGTCAACTGATCGGCGCCCGGCCGCTGAGCTTTCTG CTGACGGGACGCGTGGGCGG
Downstream 100 bases:
>100_bases GAAAGGAATATGTTGGTGATCACCATGTTTCGTGTACTCGTGGCGCGGATGACGGCGCTGGCGGTCGACGAGTCGGGCAT GTCCACCGTGGAATACGCCA
Product: putative alanine rich membrane protein
Products: NA
Alternate protein names: Type II Secretion System Protein; Alanine Rich Membrane Protein; Type II Secretion System Protein F
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MAAGGRADTGLRRAAVVGPDHRSASVVSAAAVLLAMALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAAS LDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRAADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGA ALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV
Sequences:
>Translated_226_residues MAAGGRADTGLRRAAVVGPDHRSASVVSAAAVLLAMALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAAS LDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRAADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGA ALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV >Mature_225_residues AAGGRADTGLRRAAVVGPDHRSASVVSAAAVLLAMALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASL DVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRAADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAA LADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22486; Mature: 22355
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGGRADTGLRRAAVVGPDHRSASVVSAAAVLLAMALWLGAGPSVVRARAGRPPRAHRP CCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC HQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRAADLL CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAALADGIVELAVQVRHDAAQA HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAGGRADTGLRRAAVVGPDHRSASVVSAAAVLLAMALWLGAGPSVVRARAGRPPRAHRP CCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC HQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRAADLL CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAALADGIVELAVQVRHDAAQA HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV HHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA