Click here to switch to the map view.

The map label for this gene is fadE28

Identifier: 148663407

GI number: 148663407

Start: 3991791

End: 3992810

Strand: Reverse

Name: fadE28

Synonym: MRA_3583

Alternate gene names: NA

Gene position: 3992810-3991791 (Counterclockwise)

Preceding gene: 148663408

Following gene: 148663406

Centisome position: 90.34

GC content: 66.67

Gene sequence:

>1020_bases
ATGGATTTCGATCCCACTGCGGAACAGCAAGCCGTCGCCGACGTGGTCACGTCGGTGTTGGAGCGGGACATCTCGTGGGA
GGCGCTGGTCTGCGGTGGTGTGACGGCGCTGCCGGTGCCGGAACGTCTCGGCGGCGACGGCGTGGGCCTATTCGAAGTCG
GCGCGCTGCTCACCGAGGTGGGTCGCCACGGCGCCGTCACGCCGGCGCTGGCAACGCTGGGTCTTGGGGTGGTGCCGCTG
CTCGAGCTGGCATCCGCCGAGCAACAGGACCGCTTCCTGGCCGGGGTGGCCAAGGGAGGAGTACTGACCGCCGCGCTCAA
CGAGCCCGGGGCGGCGCTGCCGGATCGGCCTGCCACTAGCTTTGTGGGTGGGCGGTTGTCGGGCACCAAAGTCGGTGTTG
GCTACGCCGAACAGGCGGACTGGATGTTGGTGACCGCCGACAACGCCGTCGTGGTGGTGTCGCCGACGGCCGACGGTGTG
CGCATGGTTCGTACGCCCACATCGAATGGTTCAGACGAGTATGTGATGACGATGGACGGCGTGGCGGTTGCCGACTGTGA
CATCCTGGCGGATGTAGCCGCGCACCGGGTCAATCAGCTAGCGCTGGCCGTCATGGGTGCATACGCCGACGGGCTGGTCG
CCGGGGCGCTGCGGCTGACCGCCGACTACGTGGCGAACCGGAAGCAGTTCGGTAAGCCGCTGTCAACCTTCCAGACCGTG
GCCGCGCAGCTCGCCGAGGTTTACATCGCCTCGCGCACCATTGACCTGGTGGCCAAGTCGGTGATCTGGAGACTGGCCGA
GGATCTGGATGCGGGAGATGATCTGGGCGTCCTCGGGTACTGGGTGACATCGCAGGCGCCGCCGGCGATGCAAATCTGCC
ATCACCTGCACGGCGGCATGGGGATGGACGTCACGTATCCGATGCACCGCTACTACTCCACGATCAAGGACCTCACCCGG
CTGCTGGGCGGGCCCTCGCATCGCCTTGAGCTCCTGGGAGCGCGATGTTCATTGACCTGA

Upstream 100 bases:

>100_bases
TCAAGCCGATCTCGGCGCCCGAGCGGCTGCGGTCCGGCTGGCTCAACGGCATTAAGCACTGGCAGGTCGACTACACCGGT
AGATGCCCGGTTGCTCACTA

Downstream 100 bases:

>100_bases
CGCCGGAGCAGCGCCAGCTGCAAGCCGAGATACGGCAATACTTTTCGAATCTCATCTCGCCCGACGAGCGCACGGAGATG
GAGAAAGACCGGCACGGCCC

Product: acyl-CoA dehydrogenase FadE28

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase FadE; Pimeloyl-CoA Dehydrogenase Small Subunit; Acyl-CoA Dehydrogenase Family Protein; Acyl-CoA Dehydrogenase-Like Protein; Isovaleryl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein; Acyl-CoA Dehydrogenase Protein; Cyclohexanecarboxyl-CoA Dehydrogenase; Acyl CoA Dehydrogenase; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-Coa Dehydrogenase Oxidoreductase; Oxidoreductase; Pimeloyl-CoA Dehydrogenase; Butyryl-CoA Dehydrogenase; Short-Chain Specific Acyl-CoA Dehydrogenase; Pimeloyl-CoA Dehydrogenase PimD-Like; Acyl-CoA Dehydrogenase Oxidoreductase Protein; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase Long-Chain Specific

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPL
LELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGV
RMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV
AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTR
LLGGPSHRLELLGARCSLT

Sequences:

>Translated_339_residues
MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPL
LELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGV
RMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV
AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTR
LLGGPSHRLELLGARCSLT
>Mature_339_residues
MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPL
LELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGV
RMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV
AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTR
LLGGPSHRLELLGARCSLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35469; Mature: 35469

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHCCCCCCHHHHHHHHHHHH
GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG
HHCCCCCCCEECCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCEEEEECC
VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCC
GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHCCCCCCHHHHHHHHHHHH
GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG
HHCCCCCCCEECCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCEEEEECC
VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCC
GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA