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The map label for this gene is yrbE4A [C]

Identifier: 148663365

GI number: 148663365

Start: 3928774

End: 3929538

Strand: Reverse

Name: yrbE4A [C]

Synonym: MRA_3541

Alternate gene names: 148663365

Gene position: 3929538-3928774 (Counterclockwise)

Preceding gene: 148663366

Following gene: 148663364

Centisome position: 88.9

GC content: 62.88

Gene sequence:

>765_bases
TTGATCCAACAACTTGCGGTTCCGGCCCGGGCCGTCGGCGGGTTCTTCGAAATGTCGATGGACACCGCGCGTGCCGCTTT
CCGGCGGCCGTTCCAGTTCCGCGAGTTTTTGGACCAGACCTGGATGGTGGCCCGCGTTTCGCTAGTCCCGACGTTGCTGG
TGTCCATTCCGTTCACGGTCCTGGTGGCGTTCACCCTCAACATTCTGTTGCGTGAAATTGGGGCCGCCGACTTGTCCGGC
GCCGGAACGGCGTTCGGCACCATCACCCAGCTGGGCCCGGTCGTGACTGTGCTGGTGGTGGCAGGTGCTGGCGCCACGGC
GATCTGCGCCGACCTGGGCGCTCGCACCATCCGTGAGGAAATCGACGCGATGCGGGTGCTGGGCATCGACCCAATTCAAC
GGCTCGTGGTCCCCAGGGTGTTGGCGTCCACATTGGTTGCGCTGCTGCTCAACGGCTTGGTGTGCGCCATTGGCCTGTCC
GGCGGCTACGCGTTCTCGGTCTTTCTTCAGGGCGTCAACCCGGGTGCGTTTATCAACGGTCTGACCGTGCTCACCGGACT
GCGCGAATTGATACTGGCGGAGATCAAGGCGCTACTGTTCGGGGTCATGGCCGGGCTGGTCGGGTGTTACCGCGGTCTGA
CGGTCAAGGGTGGGCCCAAGGGGGTGGGCAATGCGGTCAACGAGACCGTCGTCTACGCGTTCATCTGCCTTTTCGTGATC
AACGTAGTCATGACCGCTATAGGTGTGCGAATCTCGGCGCAGTAA

Upstream 100 bases:

>100_bases
GGGTTAGGATGGGCCGGCTCACACCGTGCAACGTGCGGGCCCTAAGCGCGTTCAGGAGACTCACAGACTTCGCCGCGAGC
AGTAGACGGGGGGACCCCAG

Downstream 100 bases:

>100_bases
CAAACGACGGTGAGCGAGCGATGGTGATGAAGCGATGAGCTACGACGTCACTATCCGGTTTCGCCGTTTCTTTTCGCGGC
TGCAGCGGCCGGTCGACAAC

Product: integral membrane protein YrbE4a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLS
GGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAQ

Sequences:

>Translated_254_residues
MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLS
GGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAQ
>Mature_254_residues
MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLS
GGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
NVVMTAIGVRISAQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=165, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26640; Mature: 26640

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHH
LTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NVVMTAIGVRISAQ
HHHHHHHCCCEECC
>Mature Secondary Structure
MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHH
LTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NVVMTAIGVRISAQ
HHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]