Click here to switch to the map view.

The map label for this gene is yrbE4B [C]

Identifier: 148663364

GI number: 148663364

Start: 3927897

End: 3928739

Strand: Reverse

Name: yrbE4B [C]

Synonym: MRA_3540

Alternate gene names: 148663364

Gene position: 3928739-3927897 (Counterclockwise)

Preceding gene: 148663365

Following gene: 148663363

Centisome position: 88.89

GC content: 62.99

Gene sequence:

>843_bases
ATGAGCTACGACGTCACTATCCGGTTTCGCCGTTTCTTTTCGCGGCTGCAGCGGCCGGTCGACAACTTCGGTGAGCAGGC
GCTGTTCTACGGCGAAACCATGCGCTATGTGCCCAACGCCATCACCCGCTACCGGAAGGAGACGGTCCGGCTGGTCGCCG
AGATGACGCTGGGCGCCGGAGCGCTGGTCATGATCGGCGGCACGGTCGGGGTGGCGGCCTTTTTGACCCTGGCGTCCGGT
GGCGTGATCGCCGTGCAGGGGTATTCGTCGCTGGGCGACATCGGTATCGAGGCGTTGACCGGGTTCCTGTCGGCGTTTTT
GAACGTCCGCGTTGTCGCGCCGGTGATCGCGGGTATCGCGCTGGCGGCCACCATCGGGGCCGGAGCCACCGCGCAGCTGG
GTGCCATGCGGGTCTCTGAGGAGATCGACGCCGTCGAATGCATGGCGGTGCACTCGGTGTCCTATTTGGTGTCAACCCGG
CTGATCGCCGGCCTGGTGGCGATCATTCCGTTGTATTCGTTGTCGGTGCTGGCCGCGTTCTTCGCCGCTCGTTTCACCAC
GGTGTTCGTCAATGGGCAGTCCGCGGGCCTTTATGACCATTACTTCAACACCTTCCTCATCCCCTCCGACCTGTTGTGGT
CGTTTATGCAAGCCATCGCTATGTCGATCGCGGTAATGCTGGTGCATACCTACTACGGCTACAACGCCAGCGGCGGGTCG
GTTGGGGTCGGGGTCGCGGTCGGGCAGGCCGTACGGACCTCGCTGATCGTGGTTGTTGTCATCACCTTGTTCATCTCGCT
CGCCGTCTACGGCGCGTCCGGTAACTTCAACCTCTCGGGGTAA

Upstream 100 bases:

>100_bases
TTCATCTGCCTTTTCGTGATCAACGTAGTCATGACCGCTATAGGTGTGCGAATCTCGGCGCAGTAACAAACGACGGTGAG
CGAGCGATGGTGATGAAGCG

Downstream 100 bases:

>100_bases
AAACCTTCAGAAAGGAAACATGTCCGGCGGCGGATCTCGACGCACCAGTGTCAGGGTGGCAGCGGCGCTGCTGGCCGGGC
TGATGGTGGGATCCGCAGTG

Product: integral membrane protein YrbE4b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASG
GVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTR
LIAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG

Sequences:

>Translated_280_residues
MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASG
GVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTR
LIAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
>Mature_279_residues
SYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGG
VIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRL
IAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSV
GVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=193, Percent_Identity=25.9067357512953, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 29564; Mature: 29433

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA
EEEEECCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
HHHHHHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA