| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is ychM [C]
Identifier: 148661538
GI number: 148661538
Start: 1967473
End: 1969155
Strand: Reverse
Name: ychM [C]
Synonym: MRA_1750
Alternate gene names: 148661538
Gene position: 1969155-1967473 (Counterclockwise)
Preceding gene: 148661543
Following gene: 148661536
Centisome position: 44.55
GC content: 62.86
Gene sequence:
>1683_bases ATGATTCCCACGATGACATCGGCCGGCTGGGCACCAGGGGTGGTGCAGTTCCGCGAATACCAACGGCGTTGGCTGCGCGG CGATGTCCTCGCCGGCCTGACCGTGGCCGCCTATCTGATCCCGCAAGCGATGGCGTATGCGACCGTGGCGGGCCTACCGC CGGCAGCCGGGCTGTGGGCGTCGATCGCGCCGCTTGCCATTTACGCACTGCTCGGATCGTCCCGGCAGCTTTCAATCGGC CCGGAATCCGCCACCGCCTTGATGACGGCGGCCGTGCTCGCTCCGATGGCCGCCGGGGATCTTCGACGCTATGCCGTTCT GGCGGCAACCCTCGGATTGCTAGTCGGCCTTATCTGCCTACTCGCTGGCACGGCGCGACTAGGTTTCCTCGCCAGCCTGC GATCGCGGCCGGTGCTCGTCGGATACATGGCCGGCATCGCGCTTGTCATGATCTCCAGCCAACTCGGCACTATCACCGGC ACCTCGGTCGAAGGCAACGAATTCTTCAGCGAAGTACACTCTTTCGCGACTAGCGTCACGCGAGTTCACTGGCCGACTTT TGTGTTAGCCATGTCTGTCCTAGCGCTGCTAACTATGCTCACGCGGTGGGCGCCGCGCGCCCCCGGACCGATCATCGCGG TTCTTGCGGCCACGATGCTAGTGGCCGTTATGTCCTTGGATGCCAAAGGTATTGCGATTGTGGGTCGGATACCTTCCGGT CTGCCGACGCCGGGTGTGCCGCCCGTTTCGGTGGAAGACTTGCGGGCACTGATCATTCCGGCTGCCGGGATCGCGATTGT TACCTTCACCGACGGTGTGTTGACCGCACGCGCCTTCGCCGCTCGTCGAGGTCAGGAAGTCAATGCCAACGCCGAGCTGC GCGCGGTCGGGGCCTGCAACATCGCCGCCGGGCTGACACACGGTTTTCCGGTGAGTTCCAGCAGCAGCCGTACCGCCCTC GCCGACGTCGTCGGTGGCCGCACCCAGCTGTACTCGCTGATCGCGTTGGGGCTTGTTGTCATCGTGATGGTTTTCGCGAG TGGGCTGCTGGCCATGTTTCCGATCGCCGCTCTGGGCGCTTTGGTGGTATATGCCGCGCTACGCTTGATCGACTTGTCAG AATTCCGGCGACTGGCGCGGTTTCGGCGCAGCGAACTCATGCTGGCACTAGCCACCACAGCAGCCGTGTTAGGCCTAGGA GTGTTCTATGGAGTCCTCGCCGCGGTTGCCCTGTCCATCCTCGAACTGCTTCGTCGGGTCGCACATCCGCATGACAGCGT TCTCGGGTTCGTGCCGGGCATTGCCGGCATGCACGACATCGATGACTATCCGCAGGCCAAGCGCGTGCCCGGGCTGGTGG TGTATCGCTATGACGCGCCGTTGTGCTTCGCCAATGCCGAAGACTTCCGCAGGCGAGCACTGACCGTGGTCGATCAGGAT CCGGGGCAAGTCGAGTGGTTCGTACTCAACGCCGAATCCAATGTGGAGGTCGACCTGACTGCGCTGGATGCGCTCGACCA ACTCCGCACCGAGCTGCTGCGTCGGGGAATAGTGTTCGCCATGGCCCGGGTCAAACAAGACTTGCGTGAATCACTCAGGG CCGCCAGTCTTCTCGATAAGATTGGCGAAGACCATATCTTTATGACATTGCCTACCGCAGTGCAGGCGTTCCGTCGGCGC TAA
Upstream 100 bases:
>100_bases CAAAGTCTCGCCCATTCGAGCCGCCAATTCCATGGTCAGGATTCTATAAAGATTGGGCGGGTTCTAGACCGACTCTAGCT AAGCGGCCAGCCGTCGGACA
Downstream 100 bases:
>100_bases CGCGCCGGCACCCTCAATACAACAATCGCGCCGGCTGATGGGTAACAGCTTCGATGTCGTGGGTCGACACCTTCAACATT CGCTTCCCCAAGTCGGACAA
Product: sulfate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIG PESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITG TSVEGNEFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSG LPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTAL ADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLG VFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD PGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR
Sequences:
>Translated_560_residues MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIG PESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITG TSVEGNEFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSG LPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTAL ADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLG VFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD PGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR >Mature_560_residues MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIG PESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITG TSVEGNEFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSG LPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTAL ADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLG VFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD PGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR
Specific function: Expression in E.coli induces sulfate uptake during early-to mid-log phase growth. Uptake is maximal at pH 6.0, is sulfate-specific, requires E.coli CysA and the transmembrane segment but not the STAS domain of the protein
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain
Homologues:
Organism=Homo sapiens, GI45827800, Length=492, Percent_Identity=29.8780487804878, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI39752683, Length=492, Percent_Identity=29.8780487804878, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI94721253, Length=477, Percent_Identity=33.5429769392034, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI94721259, Length=477, Percent_Identity=33.5429769392034, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI94721255, Length=477, Percent_Identity=33.5429769392034, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI94721257, Length=479, Percent_Identity=33.4029227557411, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI269784651, Length=487, Percent_Identity=28.3367556468172, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI45827802, Length=449, Percent_Identity=29.3986636971047, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI4557535, Length=513, Percent_Identity=26.7056530214425, Blast_Score=157, Evalue=4e-38, Organism=Homo sapiens, GI262206105, Length=586, Percent_Identity=27.8156996587031, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI262206075, Length=586, Percent_Identity=27.8156996587031, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI262206069, Length=586, Percent_Identity=27.8156996587031, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI262206063, Length=586, Percent_Identity=27.8156996587031, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI4505697, Length=500, Percent_Identity=25.6, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI47131207, Length=517, Percent_Identity=28.8201160541586, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI20336272, Length=517, Percent_Identity=28.8201160541586, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI100913030, Length=620, Percent_Identity=23.3870967741935, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI16418413, Length=545, Percent_Identity=25.1376146788991, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI217272867, Length=545, Percent_Identity=25.3211009174312, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI16418457, Length=493, Percent_Identity=22.3123732251521, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI301601599, Length=493, Percent_Identity=22.3123732251521, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI20336282, Length=510, Percent_Identity=22.156862745098, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI16306483, Length=510, Percent_Identity=22.156862745098, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI65506789, Length=378, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI45827804, Length=263, Percent_Identity=27.3764258555133, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI301601602, Length=291, Percent_Identity=22.680412371134, Blast_Score=80, Evalue=8e-15, Organism=Escherichia coli, GI87081859, Length=512, Percent_Identity=23.6328125, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17551690, Length=582, Percent_Identity=25.2577319587629, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17566848, Length=556, Percent_Identity=25.5395683453237, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17562578, Length=633, Percent_Identity=23.5387045813586, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI86564196, Length=631, Percent_Identity=23.9302694136292, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI193203292, Length=486, Percent_Identity=26.9547325102881, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI86565215, Length=557, Percent_Identity=24.5960502692998, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI86564876, Length=648, Percent_Identity=22.2222222222222, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI86565213, Length=246, Percent_Identity=25.2032520325203, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI86565209, Length=240, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI86565211, Length=240, Percent_Identity=23.3333333333333, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6325260, Length=584, Percent_Identity=22.6027397260274, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6319771, Length=470, Percent_Identity=26.1702127659574, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323121, Length=479, Percent_Identity=27.1398747390397, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI24649801, Length=457, Percent_Identity=27.3522975929978, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24666186, Length=529, Percent_Identity=25.8979206049149, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24651449, Length=461, Percent_Identity=27.5488069414317, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI19922482, Length=567, Percent_Identity=24.5149911816578, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI21358229, Length=457, Percent_Identity=26.6958424507659, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI85815873, Length=440, Percent_Identity=27.2727272727273, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI21355087, Length=440, Percent_Identity=25.9090909090909, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24647160, Length=440, Percent_Identity=25.9090909090909, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24663084, Length=544, Percent_Identity=25.9191176470588, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI21357695, Length=544, Percent_Identity=25.9191176470588, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI21358633, Length=531, Percent_Identity=22.7871939736347, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1739_MYCTU (P71997)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: F70688 - RefSeq: NP_216255.1 - RefSeq: NP_336240.1 - ProteinModelPortal: P71997 - EnsemblBacteria: EBMYCT00000002700 - EnsemblBacteria: EBMYCT00000071445 - GeneID: 887208 - GeneID: 923915 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1781 - KEGG: mtu:Rv1739c - TIGR: MT1781 - TubercuList: Rv1739c - GeneTree: EBGT00050000016006 - HOGENOM: HBG554309 - OMA: YACILPM - ProtClustDB: CLSK871961 - InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 - Gene3D: G3DSA:3.30.750.24 - TIGRFAMs: TIGR00815
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp; SSF52091 STAS
EC number: NA
Molecular weight: Translated: 59368; Mature: 59368
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1e61af00)-; HASH(0x1b245dbc)-; HASH(0x1e91f630)-; HASH(0x1ec12d0c)-; HASH(0x1edead08)-; HASH(0x1e997d28)-; HASH(0x1def4dc4)-; HASH(0x1ebcf1c8)-; HASH(0x1f139058)-; HASH(0x1e6753f4)-; HASH(0x1e2e3af4)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SIAPLAIYALLGSSRQLSIGPESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITGTSVEGNEFFSEVHSFATSVT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHH RVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC LPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACN CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCH IAAGLTHGFPVSSSSSRTALADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGA HHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD CCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCEEECCHHHHHHHHHEEEECC PGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDK CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGEDHIFMTLPTAVQAFRRR HCCCCEEEECHHHHHHHHCH >Mature Secondary Structure MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SIAPLAIYALLGSSRQLSIGPESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITGTSVEGNEFFSEVHSFATSVT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHH RVHWPTFVLAMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDAKGIAIVGRIPSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC LPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAELRAVGACN CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCH IAAGLTHGFPVSSSSSRTALADVVGGRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGA HHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD CCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCEEECCHHHHHHHHHEEEECC PGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDK CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGEDHIFMTLPTAVQAFRRR HCCCCEEEECHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036