| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is 148661327
Identifier: 148661327
GI number: 148661327
Start: 1733990
End: 1734556
Strand: Direct
Name: 148661327
Synonym: MRA_1543
Alternate gene names: NA
Gene position: 1733990-1734556 (Clockwise)
Preceding gene: 148661326
Following gene: 148661329
Centisome position: 39.23
GC content: 62.26
Gene sequence:
>567_bases ATGACAACATCCCGCGTGCCCCTGTTGCCGGTCGACGAGGCCAAAGCTGCTGCCGACGAAGCGGGCGTGCCCGACTACAT GGCTGAGCTCAGCATCTTCCAAGTGTTGCTGAATCATCCGCGACTAGCGCGGACCTTCAACGACCTGCTCGCCACCATGC TGTGGCACGGGACCCTGGACTCACGGTTGCGTGAGTTGGTGATCATGCGGATTGGTTGGCTCACCGACTGTGACTACGAA TGGACCCAACACTGGCGGGTTGCTTCAGGGCTTGGCGTGTCGGCCGACGATCTGCTCGGTGTACGGGATTGGCAAGGGTA CAACGGGTTCGGGCCCGCTGAGCAGGCCGTCCTGGCGGCCACCGATGACGTGGTGCGCGAGGGCGCGGTGAGTGCGCAGA GCTGGTCGGCTTGCGAGCGGGAATTACATTGCGACAAAGTGGTTCTCATCGAACTCGTTACGGTGATAAGCGCATGGCGA ATGGTCGCTTCGATCCTGCACAGCCTCGAGGTCCCACTGGAAGACGGCGTTTCCAGCTGGCCGCCCGACGGCCTTTCGCC AAGGTGA
Upstream 100 bases:
>100_bases TGCCTCGCCGCTGCGTGCGGCTCGAAGGCGCCGAGGATCTGCTGGCTACCATGGCCGGTGAACGCGACGGTGTCCCGCCT ATCCACGGAGTGCTCACACC
Downstream 100 bases:
>100_bases CTGCGCCGAGCGTGTAACCATGGCGAGATTCCGCCGGCGATTTTTCCGCCCTGAGTGCACGTTCGGCGCAGAAGCACTAG ACGATCCGGTAGGTCTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Family
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYE WTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWR MVASILHSLEVPLEDGVSSWPPDGLSPR
Sequences:
>Translated_188_residues MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYE WTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWR MVASILHSLEVPLEDGVSSWPPDGLSPR >Mature_187_residues TTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEW TQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRM VASILHSLEVPLEDGVSSWPPDGLSPR
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20796; Mature: 20665
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC PPDGLSPR CCCCCCCC >Mature Secondary Structure TTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC PPDGLSPR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA