| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is yisK [H]
Identifier: 148660718
GI number: 148660718
Start: 1049720
End: 1051654
Strand: Direct
Name: yisK [H]
Synonym: MRA_0947
Alternate gene names: 148660718
Gene position: 1049720-1051654 (Clockwise)
Preceding gene: 148660717
Following gene: 148660721
Centisome position: 23.75
GC content: 67.18
Gene sequence:
>1935_bases ATGAAGTGGGTGACGTATCGAAGTGACCACGGCGAACGAACGGGAGTGCTTTCCGGTGACGCCATCTACGCGATGCCGCC GGACGTGTCGTTGCTGGATCTGGTCGGGCGCGGCGCCGACGGTCTGCGCACGGCGGGCGAACGGGCAGTGCGCTCACCGG CCGCGGTGGTAGCGCTCGACGAGGTTACGCTGGCGGCGCCGATTCCGCGCCCGCCGTCGATCCGGGACTCGTTGTGCTTT CTGGACCACATGCGTAACTGCCAGGAAGCGATGGGGGGCGGCCGGGTGCTCATGGATACTTGGTACCGCATCCCGGCGTT CTACTTCGCGTGCCCGTCAACGGTTTTGGGACCGTACGACGACGCACCCACCGCACCCGGAAGTGCGTGGCAGGACTTCG AATTGGAGATCGCGGCGGTTATCGGAACCAGCGGCAAAGACTTGACCGTCGAGCAGGCCGAACGGTCGATCATCGGCTAT ACCATTTTCAACGACTGGTCCGCACGGGACCTGCAGATGCTGGAGGGCCAGCTGCGCATCGGACAGGCCAAGGGCAAAGA CAGCGGTATCACCCTGGGCCCCTATCTGGTCACACCGGATGAGCTGGAGCCCTATTGCCGGGGCGGGAAGCTAAGCTTGC GGGTGATCGCCTTGGTCAACGGCACCGTGATCGGATCGGGGTCGACCGCACAGATGGACTGGAGCTTCGGCGAAGTCATC GCCTATGCCTCGCGGGGGGTGACGCTGACCCCGGGTGACGTGTTCGGCTCGGGCACGGTGCCCACCTGCACGCTCGTCGA GCACCTCAGGCCACCGGAATCATTCCCGGGCTGGCTGCACGACGGCGACGTGGTCACCCTCCAGGTCGAAGGGCTGGGCG AGACGAGGCAGACCGTCCGGACGAGCGGCACTCCTTTTCCGTTGGCTCTTCGGCCGAATCCGGACGCCGAACCCGACCGG CGCGGGGTCAACCCGGCACCGACGCGGGTGCCGTTTACCCGCGGGCTGCACGAAGTCGCCGACCGGGTATGGGCGTGGAC GCTGCCCGACGGGGGATACGGCTTCAGCAACGCCGGGCTGGTCGCCGGGGACGGCGCGTCGCTGCTCGTGGATACCCTGT TCGACCTGGCACTGACACGCGAGATGTTGGCCGCGATGAAGCCGGTCACCGAGCGGGCGCCCATCACCGACGCCCTGATC ACGCACTCCAACGGCGACCACACGCACGGCACTCAACTGTTGGACCGCTCAGTGCGCATCATCGCCGCCAAGGGCACCTC CGAGGAGATCGAGCATGGCCCGGCACCGGAGATGCTAGCCCGGATCCAAACCGCCGACCTGGGCCCCGTTGCGACGCGGT ATCTGCGTGATCGCTTCGGTCACTTTGACTTCAGCGGCATCAAGCTGCGCAACGCCGACCTGACGTTCGACCGCGACCTG GCCATCGAGCTCGGCGGCCGGCGAGTCGACCTGCTCAACCTCGGTCCCGCGCACACCACCGCCGACTCGGTCGTGCACGT GGCCGACGCCGGTGTGCTGTTCGCCGGGGATCTGCTGTTCATCGGTTGCACCCCGATTGTGTGGGCGGGCCCGATCGCCA ACTGGGTGGCGGCCTGCGACGCGATGATCGCGCTGGACGCGCCCACGGTGGTGCCTGGGCATGGTCCGGTCACCGGCCCG GACGGGATCCGTGCCGTCCGTGGCTATCTGGCGCACATCGCCGAACAGGCCGAGGCGGCCTACCGCAAGGGGCTATCGTT GCCCGAGGCCGTCGAGACCATCGACCTGGGCGAGTACGCGAGCTGGCTGGACTCCGAACGGGTAGTGGTCAACGTCTACC AGCGTTACCGCGAATTGGATCCCGACACCCCGCGCCAGGACTTGCTGGCGTTGCTGGTGATGCAGGCCGAATGGGCGGCG CGCCACTGTACGTAG
Upstream 100 bases:
>100_bases CAGAGGTGCGCTACAGCGAGTGGACTCCGGAGGGCCGGCTGCGTCAATCAAGCTGGCGTGGGCTGCGGCCGGACAAGAAA CCCAGTGAGGTGGTGCGCGA
Downstream 100 bases:
>100_bases CCACTCGGGCGCGTTTGTCACGGGAATCTGCGGACCGGCGGGCGCATGGTTTGCCTGTCCACGAGCGACAAAGCCAGCGC GCCAAGGATTCCCGATGGCA
Product: fumarylacetoacetate hydrolase family/metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MKWVTYRSDHGERTGVLSGDAIYAMPPDVSLLDLVGRGADGLRTAGERAVRSPAAVVALDEVTLAAPIPRPPSIRDSLCF LDHMRNCQEAMGGGRVLMDTWYRIPAFYFACPSTVLGPYDDAPTAPGSAWQDFELEIAAVIGTSGKDLTVEQAERSIIGY TIFNDWSARDLQMLEGQLRIGQAKGKDSGITLGPYLVTPDELEPYCRGGKLSLRVIALVNGTVIGSGSTAQMDWSFGEVI AYASRGVTLTPGDVFGSGTVPTCTLVEHLRPPESFPGWLHDGDVVTLQVEGLGETRQTVRTSGTPFPLALRPNPDAEPDR RGVNPAPTRVPFTRGLHEVADRVWAWTLPDGGYGFSNAGLVAGDGASLLVDTLFDLALTREMLAAMKPVTERAPITDALI THSNGDHTHGTQLLDRSVRIIAAKGTSEEIEHGPAPEMLARIQTADLGPVATRYLRDRFGHFDFSGIKLRNADLTFDRDL AIELGGRRVDLLNLGPAHTTADSVVHVADAGVLFAGDLLFIGCTPIVWAGPIANWVAACDAMIALDAPTVVPGHGPVTGP DGIRAVRGYLAHIAEQAEAAYRKGLSLPEAVETIDLGEYASWLDSERVVVNVYQRYRELDPDTPRQDLLALLVMQAEWAA RHCT
Sequences:
>Translated_644_residues MKWVTYRSDHGERTGVLSGDAIYAMPPDVSLLDLVGRGADGLRTAGERAVRSPAAVVALDEVTLAAPIPRPPSIRDSLCF LDHMRNCQEAMGGGRVLMDTWYRIPAFYFACPSTVLGPYDDAPTAPGSAWQDFELEIAAVIGTSGKDLTVEQAERSIIGY TIFNDWSARDLQMLEGQLRIGQAKGKDSGITLGPYLVTPDELEPYCRGGKLSLRVIALVNGTVIGSGSTAQMDWSFGEVI AYASRGVTLTPGDVFGSGTVPTCTLVEHLRPPESFPGWLHDGDVVTLQVEGLGETRQTVRTSGTPFPLALRPNPDAEPDR RGVNPAPTRVPFTRGLHEVADRVWAWTLPDGGYGFSNAGLVAGDGASLLVDTLFDLALTREMLAAMKPVTERAPITDALI THSNGDHTHGTQLLDRSVRIIAAKGTSEEIEHGPAPEMLARIQTADLGPVATRYLRDRFGHFDFSGIKLRNADLTFDRDL AIELGGRRVDLLNLGPAHTTADSVVHVADAGVLFAGDLLFIGCTPIVWAGPIANWVAACDAMIALDAPTVVPGHGPVTGP DGIRAVRGYLAHIAEQAEAAYRKGLSLPEAVETIDLGEYASWLDSERVVVNVYQRYRELDPDTPRQDLLALLVMQAEWAA RHCT >Mature_644_residues MKWVTYRSDHGERTGVLSGDAIYAMPPDVSLLDLVGRGADGLRTAGERAVRSPAAVVALDEVTLAAPIPRPPSIRDSLCF LDHMRNCQEAMGGGRVLMDTWYRIPAFYFACPSTVLGPYDDAPTAPGSAWQDFELEIAAVIGTSGKDLTVEQAERSIIGY TIFNDWSARDLQMLEGQLRIGQAKGKDSGITLGPYLVTPDELEPYCRGGKLSLRVIALVNGTVIGSGSTAQMDWSFGEVI AYASRGVTLTPGDVFGSGTVPTCTLVEHLRPPESFPGWLHDGDVVTLQVEGLGETRQTVRTSGTPFPLALRPNPDAEPDR RGVNPAPTRVPFTRGLHEVADRVWAWTLPDGGYGFSNAGLVAGDGASLLVDTLFDLALTREMLAAMKPVTERAPITDALI THSNGDHTHGTQLLDRSVRIIAAKGTSEEIEHGPAPEMLARIQTADLGPVATRYLRDRFGHFDFSGIKLRNADLTFDRDL AIELGGRRVDLLNLGPAHTTADSVVHVADAGVLFAGDLLFIGCTPIVWAGPIANWVAACDAMIALDAPTVVPGHGPVTGP DGIRAVRGYLAHIAEQAEAAYRKGLSLPEAVETIDLGEYASWLDSERVVVNVYQRYRELDPDTPRQDLLALLVMQAEWAA RHCT
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=304, Percent_Identity=31.25, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI40786394, Length=304, Percent_Identity=30.2631578947368, Blast_Score=106, Evalue=9e-23, Organism=Drosophila melanogaster, GI28572127, Length=307, Percent_Identity=28.6644951140065, Blast_Score=93, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: NA
Molecular weight: Translated: 69354; Mature: 69354
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWVTYRSDHGERTGVLSGDAIYAMPPDVSLLDLVGRGADGLRTAGERAVRSPAAVVALD CCEEEEECCCCCCCCEECCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEE EVTLAAPIPRPPSIRDSLCFLDHMRNCQEAMGGGRVLMDTWYRIPAFYFACPSTVLGPYD CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHCCCCC DAPTAPGSAWQDFELEIAAVIGTSGKDLTVEQAERSIIGYTIFNDWSARDLQMLEGQLRI CCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHCCCEEEEEEECCCCCHHHHHHHCHHEE GQAKGKDSGITLGPYLVTPDELEPYCRGGKLSLRVIALVNGTVIGSGSTAQMDWSFGEVI CCCCCCCCCEEECCEEECCCCCCHHHCCCCEEEEEEEEECCEEEECCCCEEECCCHHHHH AYASRGVTLTPGDVFGSGTVPTCTLVEHLRPPESFPGWLHDGDVVTLQVEGLGETRQTVR HHHCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH TSGTPFPLALRPNPDAEPDRRGVNPAPTRVPFTRGLHEVADRVWAWTLPDGGYGFSNAGL CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCE VAGDGASLLVDTLFDLALTREMLAAMKPVTERAPITDALITHSNGDHTHGTQLLDRSVRI EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCHHHHHHCCCEEE IAAKGTSEEIEHGPAPEMLARIQTADLGPVATRYLRDRFGHFDFSGIKLRNADLTFDRDL EEECCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE AIELGGRRVDLLNLGPAHTTADSVVHVADAGVLFAGDLLFIGCTPIVWAGPIANWVAACD EEEECCCEEEEEECCCCCCCHHCEEEEECCCEEEECCEEEEECCCCEECCHHHHHHHHHH AMIALDAPTVVPGHGPVTGPDGIRAVRGYLAHIAEQAEAAYRKGLSLPEAVETIDLGEYA HHEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH SWLDSERVVVNVYQRYRELDPDTPRQDLLALLVMQAEWAARHCT HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKWVTYRSDHGERTGVLSGDAIYAMPPDVSLLDLVGRGADGLRTAGERAVRSPAAVVALD CCEEEEECCCCCCCCEECCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEE EVTLAAPIPRPPSIRDSLCFLDHMRNCQEAMGGGRVLMDTWYRIPAFYFACPSTVLGPYD CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHCCCCC DAPTAPGSAWQDFELEIAAVIGTSGKDLTVEQAERSIIGYTIFNDWSARDLQMLEGQLRI CCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHCCCEEEEEEECCCCCHHHHHHHCHHEE GQAKGKDSGITLGPYLVTPDELEPYCRGGKLSLRVIALVNGTVIGSGSTAQMDWSFGEVI CCCCCCCCCEEECCEEECCCCCCHHHCCCCEEEEEEEEECCEEEECCCCEEECCCHHHHH AYASRGVTLTPGDVFGSGTVPTCTLVEHLRPPESFPGWLHDGDVVTLQVEGLGETRQTVR HHHCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH TSGTPFPLALRPNPDAEPDRRGVNPAPTRVPFTRGLHEVADRVWAWTLPDGGYGFSNAGL CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCE VAGDGASLLVDTLFDLALTREMLAAMKPVTERAPITDALITHSNGDHTHGTQLLDRSVRI EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCHHHHHHCCCEEE IAAKGTSEEIEHGPAPEMLARIQTADLGPVATRYLRDRFGHFDFSGIKLRNADLTFDRDL EEECCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE AIELGGRRVDLLNLGPAHTTADSVVHVADAGVLFAGDLLFIGCTPIVWAGPIANWVAACD EEEECCCEEEEEECCCCCCCHHCEEEEECCCEEEECCEEEEECCCCEECCHHHHHHHHHH AMIALDAPTVVPGHGPVTGPDGIRAVRGYLAHIAEQAEAAYRKGLSLPEAVETIDLGEYA HHEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH SWLDSERVVVNVYQRYRELDPDTPRQDLLALLVMQAEWAARHCT HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377 [H]