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The map label for this gene is dcd [H]

Identifier: 148660087

GI number: 148660087

Start: 389944

End: 390516

Strand: Direct

Name: dcd [H]

Synonym: MRA_0330

Alternate gene names: 148660087

Gene position: 389944-390516 (Clockwise)

Preceding gene: 148660086

Following gene: 148660088

Centisome position: 8.82

GC content: 63.18

Gene sequence:

>573_bases
GTGCTGCTCTCCGATCGTGATCTTCGGGCCGAGATCTCCTCCGGGCGGTTGGGGATCGACCCGTTCGACGACACCCTGGT
CCAGCCGTCCAGCATCGACGTCCGGCTCGATTGCTTGTTTCGGGTGTTCAACAACACTCGCTACACCCACATCGACCCGG
CCAAGCAGCAGGACGAGCTGACCAGCCTGGTGCAACCGGTCGACGGGGAACCCTTCGTGTTGCACCCGGGCGAATTCGTG
CTCGGCTCGACGCTGGAGCTTTTCACTCTGCCCGACAACCTCGCCGGACGGCTGGAAGGCAAGTCTTCGTTGGGCCGGCT
GGGCCTGCTGACGCATTCCACCGCGGGCTTCATCGATCCTGGCTTCAGCGGTCACATCACCCTGGAGCTATCCAACGTCG
CCAACCTGCCGATCACTTTGTGGCCCGGCATGAAAATCGGTCAGCTGTGCATGTTGCGCCTGACCAGCCCGTCCGAGCAT
CCCTACGGCAGTTCCCGGGCGGGGTCGAAATACCAGGGTCAGCGCGGGCCCACGCCGTCGCGCTCCTACCAGAACTTCAT
CAGGTCTACTTAG

Upstream 100 bases:

>100_bases
TACGACCACATCCACATCACGACCGTGGGCGGCGGGTATCCCACCGGCGAGGAACTCTACATCCGCTGAGCCAGCGTGCG
GCGACAGATACGCTCGTCGG

Downstream 100 bases:

>100_bases
CATCCGGCGCGGCTAGGCCTGTCGCGGGTAGCTGTCACCTGCCGTTTGCCTGGTGCTCAGCGCCGCGATGCGGTTCGCTC
ATCGCAGCCACCTACACACA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFV
LGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEH
PYGSSRAGSKYQGQRGPTPSRSYQNFIRST

Sequences:

>Translated_190_residues
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFV
LGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEH
PYGSSRAGSKYQGQRGPTPSRSYQNFIRST
>Mature_190_residues
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFV
LGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEH
PYGSSRAGSKYQGQRGPTPSRSYQNFIRST

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=43.1578947368421, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20870; Mature: 20870

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDEL
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHH
TSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHHCCCCCCCEEECCCCEEECCEEEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCCCC
GFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYQNFIRST
HHHHHHHHCC
>Mature Secondary Structure
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDEL
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHH
TSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHHCCCCCCCEEECCCCEEECCEEEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCCCC
GFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYQNFIRST
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA