| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148654170
Identifier: 148654170
GI number: 148654170
Start: 2957983
End: 2959368
Strand: Direct
Name: 148654170
Synonym: PsycPRwf_2373
Alternate gene names: NA
Gene position: 2957983-2959368 (Clockwise)
Preceding gene: 148654167
Following gene: 148654171
Centisome position: 99.3
GC content: 49.71
Gene sequence:
>1386_bases ATGCCATCGCCGCTATTTGCCGCCTCATCCACTCACCCCCAAGTTGCCCACGCTGATGGACATCAAAGGGGCCGTGGCCG TTATGCCAAAGTGCTTGCCATGGCGATAGTGGCTGCGTCGCTCGCAGTGGTCGGCTGTGATGGAGCGACTCAGGGTGAAC AGCAGCAGGCTGAGGTTCAGATTTTGGACAATAAAATCGTGGTCAGTCACGACCTGATTCATACCAGTATTCCAGAGCGC TATCAGCCCAGCTACAACCTTGTCGGCGACTTAGTGCCGGTTAACAGTGTTGACTTGACTGCCCCTTATCACATCGTGTC AAGCACGCTTGAGGTGGCAAAAGGTGATAGCGTGCAACCAGGGCAAGTGGTGGCCAGACTTGAAGCAAAAGTTGCTGAAA ATGAGCTGCCTTTTATTGGTAATGACTTTCTGGAGGTGTATCAGGGCGATAAAAAAATAGACGCACAACCCACTCAAAGC AGTGTCACCAAGCGCACCGTAAAATCAAGCGGTACTGGTAGTATCAGCGGCGTAGGCGTGGCCGTCAGTGCCACCAGTGA TACGGCCGATGATGCTCAGCGCTCATCCGCTGTAGATAAGCCCATACAAGACAGTAAGACTCAAAGCACTGAGATAAATA CACCTCAGCAGGCAAATAAATCCCAACGCTTGGTGGAGGTGACCTTGGTGCTCAAGTCACCCATTGCTGGTAAAGTGACT AATATACAAAACACAGCTATACAAAACACAGCTGCCACACAAAATACAGCGGCGCCCAAAGATACCACTGAGAGCGCCGA TAATGCCAAAGGCGCAACTGATGAAGTCAACACCTCTTCTGCGCTACCCTCGCCTATTATTACTGTGGCCAATACTCGGG TGCTACAATTAATCGCACAATTGCCACTGGAAACTCAGTCACAGTTGTCCGTTGGTAAGCCGGTGAACTTTACTGTGTTT GATTTGCATAAAGAGTTTACCGGTCAAATCAGCCACATTACCCCCGATGCCAATAATCACACTTTGACGGTACATGCGCC TTTGATTGCTGGTGAAAACACAGCGTCACTACTCAAACCTGGCATGCGCGCCTCGATGAGCATTGAATATGGTCAAATTG AGCTTGGTGTGCGCTTGCCGCGCGAGGCCATTCATGAAGCCAACTTACAGCCGCTGACTAAGAAAAACCCTCGCCCTACC ACACCCATTCATGGCTATGTGTGGATTGTGGGACAGGACCAAAGCTTATCATACACGCCCGTTCAAGTGGTGGAGTACTT TGCCGATTCAGATCAATTCTTAGTCAGTGGCATCAGTAATGAAAGCTTGGTCTGTCTGGCAGATTTACCCAAAGATTCCG ATGGCAAAATACTTTCGGTTCAATAA
Upstream 100 bases:
>100_bases TAGCCGCTGTGTTATTGGTCACTTTATTATCAGCCACTGTGTTATTGAGAGTTTGATGACTTGCCCTTTTTTATTATCCA ACCGATAGGATTTCACTGTT
Downstream 100 bases:
>100_bases AATACTTTTGGTTCAATAATGATAAAAACTGCACATAAAATGACAAATCATTGGTTATTTTGGGGCTTTTGGGTCATGGC CAATGCTCTTGCCAGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MPSPLFAASSTHPQVAHADGHQRGRGRYAKVLAMAIVAASLAVVGCDGATQGEQQQAEVQILDNKIVVSHDLIHTSIPER YQPSYNLVGDLVPVNSVDLTAPYHIVSSTLEVAKGDSVQPGQVVARLEAKVAENELPFIGNDFLEVYQGDKKIDAQPTQS SVTKRTVKSSGTGSISGVGVAVSATSDTADDAQRSSAVDKPIQDSKTQSTEINTPQQANKSQRLVEVTLVLKSPIAGKVT NIQNTAIQNTAATQNTAAPKDTTESADNAKGATDEVNTSSALPSPIITVANTRVLQLIAQLPLETQSQLSVGKPVNFTVF DLHKEFTGQISHITPDANNHTLTVHAPLIAGENTASLLKPGMRASMSIEYGQIELGVRLPREAIHEANLQPLTKKNPRPT TPIHGYVWIVGQDQSLSYTPVQVVEYFADSDQFLVSGISNESLVCLADLPKDSDGKILSVQ
Sequences:
>Translated_461_residues MPSPLFAASSTHPQVAHADGHQRGRGRYAKVLAMAIVAASLAVVGCDGATQGEQQQAEVQILDNKIVVSHDLIHTSIPER YQPSYNLVGDLVPVNSVDLTAPYHIVSSTLEVAKGDSVQPGQVVARLEAKVAENELPFIGNDFLEVYQGDKKIDAQPTQS SVTKRTVKSSGTGSISGVGVAVSATSDTADDAQRSSAVDKPIQDSKTQSTEINTPQQANKSQRLVEVTLVLKSPIAGKVT NIQNTAIQNTAATQNTAAPKDTTESADNAKGATDEVNTSSALPSPIITVANTRVLQLIAQLPLETQSQLSVGKPVNFTVF DLHKEFTGQISHITPDANNHTLTVHAPLIAGENTASLLKPGMRASMSIEYGQIELGVRLPREAIHEANLQPLTKKNPRPT TPIHGYVWIVGQDQSLSYTPVQVVEYFADSDQFLVSGISNESLVCLADLPKDSDGKILSVQ >Mature_460_residues PSPLFAASSTHPQVAHADGHQRGRGRYAKVLAMAIVAASLAVVGCDGATQGEQQQAEVQILDNKIVVSHDLIHTSIPERY QPSYNLVGDLVPVNSVDLTAPYHIVSSTLEVAKGDSVQPGQVVARLEAKVAENELPFIGNDFLEVYQGDKKIDAQPTQSS VTKRTVKSSGTGSISGVGVAVSATSDTADDAQRSSAVDKPIQDSKTQSTEINTPQQANKSQRLVEVTLVLKSPIAGKVTN IQNTAIQNTAATQNTAAPKDTTESADNAKGATDEVNTSSALPSPIITVANTRVLQLIAQLPLETQSQLSVGKPVNFTVFD LHKEFTGQISHITPDANNHTLTVHAPLIAGENTASLLKPGMRASMSIEYGQIELGVRLPREAIHEANLQPLTKKNPRPTT PIHGYVWIVGQDQSLSYTPVQVVEYFADSDQFLVSGISNESLVCLADLPKDSDGKILSVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49067; Mature: 48936
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPLFAASSTHPQVAHADGHQRGRGRYAKVLAMAIVAASLAVVGCDGATQGEQQQAEVQ CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEE ILDNKIVVSHDLIHTSIPERYQPSYNLVGDLVPVNSVDLTAPYHIVSSTLEVAKGDSVQP EECCEEEEEECHHHCCCCHHHCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCH GQVVARLEAKVAENELPFIGNDFLEVYQGDKKIDAQPTQSSVTKRTVKSSGTGSISGVGV HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE AVSATSDTADDAQRSSAVDKPIQDSKTQSTEINTPQQANKSQRLVEVTLVLKSPIAGKVT EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCC NIQNTAIQNTAATQNTAAPKDTTESADNAKGATDEVNTSSALPSPIITVANTRVLQLIAQ CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH LPLETQSQLSVGKPVNFTVFDLHKEFTGQISHITPDANNHTLTVHAPLIAGENTASLLKP CCCCCCHHCCCCCCCCEEEEECCHHHCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHCC GMRASMSIEYGQIELGVRLPREAIHEANLQPLTKKNPRPTTPIHGYVWIVGQDQSLSYTP CCCCEEEEEECEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCH VQVVEYFADSDQFLVSGISNESLVCLADLPKDSDGKILSVQ HHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEC >Mature Secondary Structure PSPLFAASSTHPQVAHADGHQRGRGRYAKVLAMAIVAASLAVVGCDGATQGEQQQAEVQ CCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEE ILDNKIVVSHDLIHTSIPERYQPSYNLVGDLVPVNSVDLTAPYHIVSSTLEVAKGDSVQP EECCEEEEEECHHHCCCCHHHCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCH GQVVARLEAKVAENELPFIGNDFLEVYQGDKKIDAQPTQSSVTKRTVKSSGTGSISGVGV HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE AVSATSDTADDAQRSSAVDKPIQDSKTQSTEINTPQQANKSQRLVEVTLVLKSPIAGKVT EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCC NIQNTAIQNTAATQNTAAPKDTTESADNAKGATDEVNTSSALPSPIITVANTRVLQLIAQ CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH LPLETQSQLSVGKPVNFTVFDLHKEFTGQISHITPDANNHTLTVHAPLIAGENTASLLKP CCCCCCHHCCCCCCCCEEEEECCHHHCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHCC GMRASMSIEYGQIELGVRLPREAIHEANLQPLTKKNPRPTTPIHGYVWIVGQDQSLSYTP CCCCEEEEEECEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCH VQVVEYFADSDQFLVSGISNESLVCLADLPKDSDGKILSVQ HHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA