Click here to switch to the map view.

The map label for this gene is yafJ [C]

Identifier: 148654087

GI number: 148654087

Start: 2856611

End: 2857525

Strand: Direct

Name: yafJ [C]

Synonym: PsycPRwf_2290

Alternate gene names: 148654087

Gene position: 2856611-2857525 (Clockwise)

Preceding gene: 148654086

Following gene: 148654089

Centisome position: 95.89

GC content: 47.32

Gene sequence:

>915_bases
ATGTGTCAATTATTAGGTATGAACGCCAATACCCCAACGGACATCGGGTTTAGCTTCACAGGATTTCACAACCGAGGCGG
AAACACCGACCACCATAGCGATGGTTTTGGTATCGCTTTTTTTGAACCGAGCAAATGTGATGCACCCAACCAGTCTGAGG
CACAAGGTCGTGGCCGCGGACTGCGCCTGTTTCATGATGATAAGCCAAGCTATGAATCCCCAGTGGCCGACTTAGTAAAA
AACTATCCCATCAAAGCACTTAACGTAGTGGCTCACATCCGTAAAGCCACACAAGGTAGCAACTGCTTGGCCAACACCCA
CCCTTTCGTGCGTGAAGTGTGGGGCGAGCAATGGGTATTCGCTCATAATGGTCAAATGAGTGAAGGCTTTATTAAGCGCT
GCCATCGCCTACAAGACAATGGCAATAGCGAGTACTGCCGGCCAGTTGGCACAACCGATTCTGAAGTGGCGTTTTGTTAT
TTAATTAATCGTCTAAAATCCACCTATAAAAAACGCCCCTCTGATGAGGAGCTGTTTCGATTTTTGACCGCCCAGTGCCG
TTATTTGGCAGCCAATGGATTGTTTAACTGTCTGCTGTCTAATGGAGATTGGCAATTGGCGTATGCCAACTCCTTACTGT
TTTATCTGACCCGTAAGGCGCCCTTTGGTGAAGCCAAGCTGGCTGATGATGAGTTATCTATTAACTTTGGGGATGTCACT
ACCGATAAAGACAAGGTGAGCATTTTGGTCACTGTGCCGTTGACCGAAAATGAAGAGTGGCAGCAACTGGCGGTCAATGA
ATGTTTGGTCTTTCAAGACGGCGATATTATATTTCGTGACACCCCAAGCCTACGCAAATACTTAACCATTGAAGAGGGTA
TTGCCATTGCCCGTCAAGTGGGCGCCAGTTTATAA

Upstream 100 bases:

>100_bases
TTTTACAAAATATCGATGTCACGCCGGCGGCTGATGACTAAGATAGTTGCAACTGTTAATAGATAGATAAATAGACAATC
AACAAGGTGGTAAGTTATAA

Downstream 100 bases:

>100_bases
ATACGCCCCGCAGCAACGTTTGAACTTCTCACCGGAGCCGCAGAGACAAGGCTGCTTTTGGCTAAGTCCCATCACCACTG
TGGGGTCTAAAAAATACCAG

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MCQLLGMNANTPTDIGFSFTGFHNRGGNTDHHSDGFGIAFFEPSKCDAPNQSEAQGRGRGLRLFHDDKPSYESPVADLVK
NYPIKALNVVAHIRKATQGSNCLANTHPFVREVWGEQWVFAHNGQMSEGFIKRCHRLQDNGNSEYCRPVGTTDSEVAFCY
LINRLKSTYKKRPSDEELFRFLTAQCRYLAANGLFNCLLSNGDWQLAYANSLLFYLTRKAPFGEAKLADDELSINFGDVT
TDKDKVSILVTVPLTENEEWQQLAVNECLVFQDGDIIFRDTPSLRKYLTIEEGIAIARQVGASL

Sequences:

>Translated_304_residues
MCQLLGMNANTPTDIGFSFTGFHNRGGNTDHHSDGFGIAFFEPSKCDAPNQSEAQGRGRGLRLFHDDKPSYESPVADLVK
NYPIKALNVVAHIRKATQGSNCLANTHPFVREVWGEQWVFAHNGQMSEGFIKRCHRLQDNGNSEYCRPVGTTDSEVAFCY
LINRLKSTYKKRPSDEELFRFLTAQCRYLAANGLFNCLLSNGDWQLAYANSLLFYLTRKAPFGEAKLADDELSINFGDVT
TDKDKVSILVTVPLTENEEWQQLAVNECLVFQDGDIIFRDTPSLRKYLTIEEGIAIARQVGASL
>Mature_304_residues
MCQLLGMNANTPTDIGFSFTGFHNRGGNTDHHSDGFGIAFFEPSKCDAPNQSEAQGRGRGLRLFHDDKPSYESPVADLVK
NYPIKALNVVAHIRKATQGSNCLANTHPFVREVWGEQWVFAHNGQMSEGFIKRCHRLQDNGNSEYCRPVGTTDSEVAFCY
LINRLKSTYKKRPSDEELFRFLTAQCRYLAANGLFNCLLSNGDWQLAYANSLLFYLTRKAPFGEAKLADDELSINFGDVT
TDKDKVSILVTVPLTENEEWQQLAVNECLVFQDGDIIFRDTPSLRKYLTIEEGIAIARQVGASL

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=278, Percent_Identity=44.2446043165468, Blast_Score=244, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 34093; Mature: 34093

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLLGMNANTPTDIGFSFTGFHNRGGNTDHHSDGFGIAFFEPSKCDAPNQSEAQGRGRG
CCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCC
LRLFHDDKPSYESPVADLVKNYPIKALNVVAHIRKATQGSNCLANTHPFVREVWGEQWVF
EEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEE
AHNGQMSEGFIKRCHRLQDNGNSEYCRPVGTTDSEVAFCYLINRLKSTYKKRPSDEELFR
EECCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
FLTAQCRYLAANGLFNCLLSNGDWQLAYANSLLFYLTRKAPFGEAKLADDELSINFGDVT
HHHHHHHHHHHHHHHEEEECCCCEEEEECCCEEEEEECCCCCCCCEECCCCEEEEECCCC
TDKDKVSILVTVPLTENEEWQQLAVNECLVFQDGDIIFRDTPSLRKYLTIEEGIAIARQV
CCCCEEEEEEEEECCCCCHHHHHHHHHEEEEECCCEEEECCCHHHHHEEHHHHHHHHHHH
GASL
CCCC
>Mature Secondary Structure
MCQLLGMNANTPTDIGFSFTGFHNRGGNTDHHSDGFGIAFFEPSKCDAPNQSEAQGRGRG
CCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCC
LRLFHDDKPSYESPVADLVKNYPIKALNVVAHIRKATQGSNCLANTHPFVREVWGEQWVF
EEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEE
AHNGQMSEGFIKRCHRLQDNGNSEYCRPVGTTDSEVAFCYLINRLKSTYKKRPSDEELFR
EECCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
FLTAQCRYLAANGLFNCLLSNGDWQLAYANSLLFYLTRKAPFGEAKLADDELSINFGDVT
HHHHHHHHHHHHHHHEEEECCCCEEEEECCCEEEEEECCCCCCCCEECCCCEEEEECCCC
TDKDKVSILVTVPLTENEEWQQLAVNECLVFQDGDIIFRDTPSLRKYLTIEEGIAIARQV
CCCCEEEEEEEEECCCCCHHHHHHHHHEEEEECCCEEEECCCHHHHHEEHHHHHHHHHHH
GASL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]