| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148654072
Identifier: 148654072
GI number: 148654072
Start: 2839576
End: 2840094
Strand: Direct
Name: 148654072
Synonym: PsycPRwf_2275
Alternate gene names: NA
Gene position: 2839576-2840094 (Clockwise)
Preceding gene: 148654069
Following gene: 148654073
Centisome position: 95.32
GC content: 42.97
Gene sequence:
>519_bases ATGAAAGCTTTGACCACTTTAATGATGACTGCCACCCTTACTATAGGGGCTCTTGCTACAGGTTGTCAAACCACCACCAA TGTAACACCTGCGACCTCACATGCGCACCCACAAATTACCACCCATCCTTTGACCAATGCTGCACTACAAGCCAATGATT GGCAGTTAATCGATGCCATGGACAACAATGGTAACAAGGTTACTGACCTATTTATCGATCCTGCCAAGCCACTAACACTA AGCTTCAATAAAATTGACAATCATGACATGGTGTCATTTATCAATACTTGTAATAACATCTCATCGGCTTATACCATCAG TGATAATAAGCTAAAGCTTGGCAATATTATGAGCACCATGATGGCCTGTCCAGATGCTGAAGCTAAGTTCGATGCCGCTA CAGTGGCCACAGCCATGGGTAATTACACGCTAAGTGAAGATACCAACAAACATCCCATGCTGGTTATCAGCAGCGAAAAG CAAGTAGCGCATTTTAAAGCAGTTCCTAAGAGCAAATAA
Upstream 100 bases:
>100_bases AATGGCAGGCTTAAGCTGCGCGCTCATAGCCACAATTAAACTAAACAACCATAGCTTTGCGCAGATTTACTCTATTTTAT TTTTATTTGAAGGATATTCC
Downstream 100 bases:
>100_bases TCAGTCTGTAACACGTATTGATGACTGACTGATAACGTATTAATAAAAAGAGCACCTGTCTTATGTCAGGTGTTTTTTTT GGCGGCAAGTTTTGAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKALTTLMMTATLTIGALATGCQTTTNVTPATSHAHPQITTHPLTNAALQANDWQLIDAMDNNGNKVTDLFIDPAKPLTL SFNKIDNHDMVSFINTCNNISSAYTISDNKLKLGNIMSTMMACPDAEAKFDAATVATAMGNYTLSEDTNKHPMLVISSEK QVAHFKAVPKSK
Sequences:
>Translated_172_residues MKALTTLMMTATLTIGALATGCQTTTNVTPATSHAHPQITTHPLTNAALQANDWQLIDAMDNNGNKVTDLFIDPAKPLTL SFNKIDNHDMVSFINTCNNISSAYTISDNKLKLGNIMSTMMACPDAEAKFDAATVATAMGNYTLSEDTNKHPMLVISSEK QVAHFKAVPKSK >Mature_172_residues MKALTTLMMTATLTIGALATGCQTTTNVTPATSHAHPQITTHPLTNAALQANDWQLIDAMDNNGNKVTDLFIDPAKPLTL SFNKIDNHDMVSFINTCNNISSAYTISDNKLKLGNIMSTMMACPDAEAKFDAATVATAMGNYTLSEDTNKHPMLVISSEK QVAHFKAVPKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18502
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALTTLMMTATLTIGALATGCQTTTNVTPATSHAHPQITTHPLTNAALQANDWQLIDAM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEEE DNNGNKVTDLFIDPAKPLTLSFNKIDNHDMVSFINTCNNISSAYTISDNKLKLGNIMSTM CCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHH MACPDAEAKFDAATVATAMGNYTLSEDTNKHPMLVISSEKQVAHFKAVPKSK HHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCCCEEEEECCCCCC >Mature Secondary Structure MKALTTLMMTATLTIGALATGCQTTTNVTPATSHAHPQITTHPLTNAALQANDWQLIDAM CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCEEEEEEE DNNGNKVTDLFIDPAKPLTLSFNKIDNHDMVSFINTCNNISSAYTISDNKLKLGNIMSTM CCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHH MACPDAEAKFDAATVATAMGNYTLSEDTNKHPMLVISSEKQVAHFKAVPKSK HHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA