| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ydhL [H]
Identifier: 148654054
GI number: 148654054
Start: 2803248
End: 2803523
Strand: Direct
Name: ydhL [H]
Synonym: PsycPRwf_2257
Alternate gene names: 148654054
Gene position: 2803248-2803523 (Clockwise)
Preceding gene: 148654050
Following gene: 148654056
Centisome position: 94.1
GC content: 43.48
Gene sequence:
>276_bases GTGATACTCATGTTCGACCAAATAGAGCTCTTTGCTATTGAAAATCCCTGTATTGGCGTCTGTCAAAGCAATAAAAAAGG TTATTGCTTTGGGTGTCTGCGCAGCCGCACAGAGCGTCAATTGTGGCTCCAGATGACGGATGAACAAAAGCGTGAGGTGC TAAGGCTTATTATAGGCCGCAAAAAAAGAATAGAGCAAATGCGCCTACGCCAGCGTGAACAAATGGAACTAGACTTTGGT TCAGCAGAGGAGCTGCATTATTTATTTGATAATTAG
Upstream 100 bases:
>100_bases AAAAGGTTATTCTATATTGGCTCCGCTTATAGCTCATGGTCTCTTCAACCTCAAAGTTACGTCTTAAGCTTCACAATATC ATATCTTCGGCAGGGGCGAG
Downstream 100 bases:
>100_bases CTACGGCAAACTATTACAATAAATGGCTTATAGTTATAAAACGCCCTGCAAAGGAAAAAGCCCCCATTCGGATGAATGGG GGCTTTTAGGTATAGGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MILMFDQIELFAIENPCIGVCQSNKKGYCFGCLRSRTERQLWLQMTDEQKREVLRLIIGRKKRIEQMRLRQREQMELDFG SAEELHYLFDN
Sequences:
>Translated_91_residues MILMFDQIELFAIENPCIGVCQSNKKGYCFGCLRSRTERQLWLQMTDEQKREVLRLIIGRKKRIEQMRLRQREQMELDFG SAEELHYLFDN >Mature_91_residues MILMFDQIELFAIENPCIGVCQSNKKGYCFGCLRSRTERQLWLQMTDEQKREVLRLIIGRKKRIEQMRLRQREQMELDFG SAEELHYLFDN
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081952, Length=53, Percent_Identity=52.8301886792453, Blast_Score=68, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010710 [H]
Pfam domain/function: PF06945 DUF1289 [H]
EC number: NA
Molecular weight: Translated: 11017; Mature: 11017
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMFDQIELFAIENPCIGVCQSNKKGYCFGCLRSRTERQLWLQMTDEQKREVLRLIIGR CEEEECCEEEEEECCCCEEEEECCCCCEEEHHHHCCCHHHHHEEECCHHHHHHHHHHHCC KKRIEQMRLRQREQMELDFGSAEELHYLFDN HHHHHHHHHHHHHHHCCCCCCCCCEEEECCC >Mature Secondary Structure MILMFDQIELFAIENPCIGVCQSNKKGYCFGCLRSRTERQLWLQMTDEQKREVLRLIIGR CEEEECCEEEEEECCCCEEEEECCCCCEEEHHHHCCCHHHHHEEECCHHHHHHHHHHHCC KKRIEQMRLRQREQMELDFGSAEELHYLFDN HHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]