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The map label for this gene is ylbK [H]

Identifier: 148654045

GI number: 148654045

Start: 2792270

End: 2793310

Strand: Direct

Name: ylbK [H]

Synonym: PsycPRwf_2248

Alternate gene names: 148654045

Gene position: 2792270-2793310 (Clockwise)

Preceding gene: 148654044

Following gene: 148654047

Centisome position: 93.73

GC content: 49.86

Gene sequence:

>1041_bases
ATGAGGACTAGAGCTGGCTTGCCTTTTAATGGCCAAAAGACCGGCTTAGCCTGTGTAGCGGTCATGGCCTCTACGCTGCT
GGTGAGCGCTTGTCACACCTCATCTGTCGCTTCTGGCAAATCTGGCCAACATGTAGCGACGTCTACTGCCTCTGCCCCAA
CCATCGCTTTGGTATTAGGTGGCGGGGGCGCTAAGGGATTTGCTCATGTGGGTGTGATTAAAGCTTTGGAGGCCAATAGC
ATTCACCCAAACTTGGTGGTAGGCACCAGCGTCGGTAGCTTTGTGGGCAGTCTTTATGCCAGTGGTAAATCTGCTGCCGA
GCTTGAGCGCATTGCCCGCACTACTGCAGACAGCGAGCTGACCGACTTTACCTTAGCTTATCAAGGTATCATTGAGGGCA
ACAAGCTGCGTGATTTTGTCAATCTACAGGTCAATAATCAGCCCATTGAAGCCTTTCCCATTCGCTTTGGCGCAGTGGCG
GCTGAAAAGCACAGCTTAGCTAAGACCGTATTTACCCAAGGTGAAGCTGGACTTGCGGTACAGGCCTCAAGTAGCGTCCC
TAATGTATTTATTGCTCCCCGTATTCCTGATCCTAAGACGTCAGGTATCGTGGGTAAAAAATATATCGACGGCGGGGTGG
TCAGTATCGTACCCGTGGATAGCGCCAAAGCACTGGGTGCAGATATTGTAATTGCGGTGGATTTACAAATAAATAAAAAT
AAAAACACCTCTCCATCGGGTATCAAAGATGCCAACCGCAGTCTGTGGTCATTAATTGAACAAGGCTATAATAGCTATCT
TAATAGCAGTGCTAAAGACTCAGCCACTCAAGCTTACCGTCAACACTATGCGGCGATTAATGAGGCAGAAATAGGCCGTG
CTGATGTGGTCATTCGCCCTGATGTGGCGAATATCAGTGCCATTACCACCTTAGATCGCGAAAAAGCCATTGCTGCTGGC
GCTGCTGCCACCGAGCAAAACTTGCCAGCCATCCGCGCAGCGATTGCTAAGGCTCACGTGCAATATCGGCTCAATAATTG
A

Upstream 100 bases:

>100_bases
GAAAGCGTGACTACTCAAGGCTGGCACATCTCCATCATTGATGTGGAAGGACGCTTTATCAAACTGCTTGAATTAACCCC
CGTGGCTGAAGACTTATACA

Downstream 100 bases:

>100_bases
CACGCAATCTTTGCCATTGAATAAGCCCAAATTGAAAAACCCACTATCAATATGATAGTGGGCTTTTTTTATACAATAAA
CTGTGTTTATTTTACGATGG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRTRAGLPFNGQKTGLACVAVMASTLLVSACHTSSVASGKSGQHVATSTASAPTIALVLGGGGAKGFAHVGVIKALEANS
IHPNLVVGTSVGSFVGSLYASGKSAAELERIARTTADSELTDFTLAYQGIIEGNKLRDFVNLQVNNQPIEAFPIRFGAVA
AEKHSLAKTVFTQGEAGLAVQASSSVPNVFIAPRIPDPKTSGIVGKKYIDGGVVSIVPVDSAKALGADIVIAVDLQINKN
KNTSPSGIKDANRSLWSLIEQGYNSYLNSSAKDSATQAYRQHYAAINEAEIGRADVVIRPDVANISAITTLDREKAIAAG
AAATEQNLPAIRAAIAKAHVQYRLNN

Sequences:

>Translated_346_residues
MRTRAGLPFNGQKTGLACVAVMASTLLVSACHTSSVASGKSGQHVATSTASAPTIALVLGGGGAKGFAHVGVIKALEANS
IHPNLVVGTSVGSFVGSLYASGKSAAELERIARTTADSELTDFTLAYQGIIEGNKLRDFVNLQVNNQPIEAFPIRFGAVA
AEKHSLAKTVFTQGEAGLAVQASSSVPNVFIAPRIPDPKTSGIVGKKYIDGGVVSIVPVDSAKALGADIVIAVDLQINKN
KNTSPSGIKDANRSLWSLIEQGYNSYLNSSAKDSATQAYRQHYAAINEAEIGRADVVIRPDVANISAITTLDREKAIAAG
AAATEQNLPAIRAAIAKAHVQYRLNN
>Mature_346_residues
MRTRAGLPFNGQKTGLACVAVMASTLLVSACHTSSVASGKSGQHVATSTASAPTIALVLGGGGAKGFAHVGVIKALEANS
IHPNLVVGTSVGSFVGSLYASGKSAAELERIARTTADSELTDFTLAYQGIIEGNKLRDFVNLQVNNQPIEAFPIRFGAVA
AEKHSLAKTVFTQGEAGLAVQASSSVPNVFIAPRIPDPKTSGIVGKKYIDGGVVSIVPVDSAKALGADIVIAVDLQINKN
KNTSPSGIKDANRSLWSLIEQGYNSYLNSSAKDSATQAYRQHYAAINEAEIGRADVVIRPDVANISAITTLDREKAIAAG
AAATEQNLPAIRAAIAKAHVQYRLNN

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=211, Percent_Identity=33.6492890995261, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI260656041, Length=211, Percent_Identity=33.6492890995261, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI116256487, Length=211, Percent_Identity=33.6492890995261, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI260656043, Length=211, Percent_Identity=33.6492890995261, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI260656037, Length=211, Percent_Identity=33.6492890995261, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI148727335, Length=210, Percent_Identity=32.8571428571429, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI148727290, Length=210, Percent_Identity=32.8571428571429, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI226510936, Length=304, Percent_Identity=30.2631578947368, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193204778, Length=198, Percent_Identity=25.7575757575758, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=280, Percent_Identity=27.8571428571429, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35874; Mature: 35874

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRAGLPFNGQKTGLACVAVMASTLLVSACHTSSVASGKSGQHVATSTASAPTIALVLG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCEEEEEEE
GGGAKGFAHVGVIKALEANSIHPNLVVGTSVGSFVGSLYASGKSAAELERIARTTADSEL
CCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
TDFTLAYQGIIEGNKLRDFVNLQVNNQPIEAFPIRFGAVAAEKHSLAKTVFTQGEAGLAV
HHEEEEEHHHCCCCCEEEEEEEEECCCCCEEECEEHHHHHHHHHHHHHHHHCCCCCCEEE
QASSSVPNVFIAPRIPDPKTSGIVGKKYIDGGVVSIVPVDSAKALGADIVIAVDLQINKN
EECCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEEECCCCHHCCCEEEEEEEEEECCC
KNTSPSGIKDANRSLWSLIEQGYNSYLNSSAKDSATQAYRQHYAAINEAEIGRADVVIRP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC
DVANISAITTLDREKAIAAGAAATEQNLPAIRAAIAKAHVQYRLNN
CCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MRTRAGLPFNGQKTGLACVAVMASTLLVSACHTSSVASGKSGQHVATSTASAPTIALVLG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCEEEEEEE
GGGAKGFAHVGVIKALEANSIHPNLVVGTSVGSFVGSLYASGKSAAELERIARTTADSEL
CCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
TDFTLAYQGIIEGNKLRDFVNLQVNNQPIEAFPIRFGAVAAEKHSLAKTVFTQGEAGLAV
HHEEEEEHHHCCCCCEEEEEEEEECCCCCEEECEEHHHHHHHHHHHHHHHHCCCCCCEEE
QASSSVPNVFIAPRIPDPKTSGIVGKKYIDGGVVSIVPVDSAKALGADIVIAVDLQINKN
EECCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEEECCCCHHCCCEEEEEEEEEECCC
KNTSPSGIKDANRSLWSLIEQGYNSYLNSSAKDSATQAYRQHYAAINEAEIGRADVVIRP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC
DVANISAITTLDREKAIAAGAAATEQNLPAIRAAIAKAHVQYRLNN
CCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]