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The map label for this gene is lolB [H]

Identifier: 148653900

GI number: 148653900

Start: 2625415

End: 2626137

Strand: Direct

Name: lolB [H]

Synonym: PsycPRwf_2103

Alternate gene names: 148653900

Gene position: 2625415-2626137 (Clockwise)

Preceding gene: 148653899

Following gene: 148653901

Centisome position: 88.13

GC content: 52.14

Gene sequence:

>723_bases
ATGACCCTACTGTTTTCAAGCCGTGCGGCTACTGTTACTCAGCGCCCTAGTGACGCTATGATTGACACTAGTATTACCGC
TACTAAGCCTACCAATATCCCTCGCATGACCAAAGCTTGGGCAGGTTTAGCCCTAGCCGCTTGTGCTGTGGCAATCACGG
GCTGCCAGACCACTCAGACGTTAGGGGGCGCTAATACCACACAGGTCGTCACCGCAGGCGATGCTCAGTATCCTGACTTG
CTAAAAAGCTTTAGCATTCGCGGTAAAATTGGGGTTACCACTCCTAAGACACAAACTGCCGCTGCACAATCTGGCAGTGC
CTTTTATGTGTGGGCACAAGAAGATGAGCGCTTTGCCATTGATATCACTGGCGCACTGGGCATCGGTCACACTGTGATTG
AATATGATGGTAATACCGCAACCTTAGTCAGCGACCGTACTGGTGAGATTAGTGCCGCCTCACCAGAGGAGTTATTGCAG
CAAGCCACAGGCTGGCAAGCCCCGATCTCTCAGCTGCGCCACTGGATTTCTGGTCGCCCTGCGCCTACTGATAGCAACAG
TGAGCTCGACGCACAAGGGCGCCTACAGACCTCACAAAATGGCGACTGGATAGCCCGCTTCGATTATAAAGACAGCGCAG
CACAAACCCGTCGCCCCAATAAAATCACTGTGATGCGTAATGATGGTCACCGAGTTATCTTGACCATAGCGCACGATAAA
TAA

Upstream 100 bases:

>100_bases
TTGGCTGTTTTTAGCGCCCAGTTTTATGTTTTTATTATCATTGTTATACACTTGCTTCAATTTTGGATTTATTTTTAAGA
CTTATTTATTAAGGACAATT

Downstream 100 bases:

>100_bases
CCAATAAATTTGCGTCCAATTCACTGTTGAAGCAGATACGTTAATAGCCTTTTGTAAGAAGACTGTATTATGACCTCGTA
TGCCAAGCTTAGTTTATTTT

Product: outer membrane lipoprotein LolB

Products: 5-aminolevulinate; CoA; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTLLFSSRAATVTQRPSDAMIDTSITATKPTNIPRMTKAWAGLALAACAVAITGCQTTQTLGGANTTQVVTAGDAQYPDL
LKSFSIRGKIGVTTPKTQTAAAQSGSAFYVWAQEDERFAIDITGALGIGHTVIEYDGNTATLVSDRTGEISAASPEELLQ
QATGWQAPISQLRHWISGRPAPTDSNSELDAQGRLQTSQNGDWIARFDYKDSAAQTRRPNKITVMRNDGHRVILTIAHDK

Sequences:

>Translated_240_residues
MTLLFSSRAATVTQRPSDAMIDTSITATKPTNIPRMTKAWAGLALAACAVAITGCQTTQTLGGANTTQVVTAGDAQYPDL
LKSFSIRGKIGVTTPKTQTAAAQSGSAFYVWAQEDERFAIDITGALGIGHTVIEYDGNTATLVSDRTGEISAASPEELLQ
QATGWQAPISQLRHWISGRPAPTDSNSELDAQGRLQTSQNGDWIARFDYKDSAAQTRRPNKITVMRNDGHRVILTIAHDK
>Mature_239_residues
TLLFSSRAATVTQRPSDAMIDTSITATKPTNIPRMTKAWAGLALAACAVAITGCQTTQTLGGANTTQVVTAGDAQYPDLL
KSFSIRGKIGVTTPKTQTAAAQSGSAFYVWAQEDERFAIDITGALGIGHTVIEYDGNTATLVSDRTGEISAASPEELLQQ
ATGWQAPISQLRHWISGRPAPTDSNSELDAQGRLQTSQNGDWIARFDYKDSAAQTRRPNKITVMRNDGHRVILTIAHDK

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 25707; Mature: 25576

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLFSSRAATVTQRPSDAMIDTSITATKPTNIPRMTKAWAGLALAACAVAITGCQTTQT
CEEEECCCCEEEEECCCCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
LGGANTTQVVTAGDAQYPDLLKSFSIRGKIGVTTPKTQTAAAQSGSAFYVWAQEDERFAI
CCCCCCEEEEEECCCCCHHHHHHCCCCCEEECCCCCCHHHHCCCCCEEEEEECCCCEEEE
DITGALGIGHTVIEYDGNTATLVSDRTGEISAASPEELLQQATGWQAPISQLRHWISGRP
EEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
APTDSNSELDAQGRLQTSQNGDWIARFDYKDSAAQTRRPNKITVMRNDGHRVILTIAHDK
CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHCCCCCEEEEEECCCCEEEEEEECCC
>Mature Secondary Structure 
TLLFSSRAATVTQRPSDAMIDTSITATKPTNIPRMTKAWAGLALAACAVAITGCQTTQT
EEEECCCCEEEEECCCCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
LGGANTTQVVTAGDAQYPDLLKSFSIRGKIGVTTPKTQTAAAQSGSAFYVWAQEDERFAI
CCCCCCEEEEEECCCCCHHHHHHCCCCCEEECCCCCCHHHHCCCCCEEEEEECCCCEEEE
DITGALGIGHTVIEYDGNTATLVSDRTGEISAASPEELLQQATGWQAPISQLRHWISGRP
EEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
APTDSNSELDAQGRLQTSQNGDWIARFDYKDSAAQTRRPNKITVMRNDGHRVILTIAHDK
CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHCCCCCEEEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; glycine [C]

Specific reaction: Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [C]

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA