| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is mltB [H]
Identifier: 148653769
GI number: 148653769
Start: 2456988
End: 2458448
Strand: Direct
Name: mltB [H]
Synonym: PsycPRwf_1972
Alternate gene names: 148653769
Gene position: 2456988-2458448 (Clockwise)
Preceding gene: 148653768
Following gene: 148653773
Centisome position: 82.48
GC content: 48.67
Gene sequence:
>1461_bases ATGTCATCCACTAAGTTATCTGCTGTGTTTCCTGTATTATCCACACTAGGGCTTGCCAGCCTAGTTTTTATTGCACCTAC CAGTTATGCTGAGCAAAAGCCGTTACCCACTCTGGATAACAACCAGTTTAATGTGTGTTTAGATAATCTGAGCCAGTCCT CAGCTTTTGCCAGTGTTAAAGACACTTTGGCTCAGTATCGCCCGGCACAAGGCGACCCTAGCGTGTTAGAGTCGCTCGAT TATCAACCTGAATTTCAAAAAGAGCCTTGGGATTATCTGGCAAGCTTGGTAGACGAAGAGCGGGTTATCGATGGCATTGC GGCCAGTGAGCGTTATGCCGATGTCTTAGCACGTATTGAAGCGCAATACGGTGTCAACCGTTACGATGTGCTTGGCGTGT GGGGCGTTGAATCTGACTTTGGAACTACCCTTGGCAAAAAAGAGGTGGTGCAGTCCTTGGCTACCTTATCTTGCTTTGGT CGCCGCCAAAGCTATTTTCGCAGTGAATATGTCAGCGCCCTAAAAATCTTAAAGCAAGGCGACATTGCCCCCAATGACTT TAAAGGCTCTTGGGCGGGTGCATTTGGGCAGACCCAATTTATGCCCTCAACCTTCTTGCAACTGGCACAAGACTTCGATG GTGATGGCCGAAAAGACTTGGTCAATAGCCAAGCCGATGCCCTAGCCTCCACCGCCAACTTCTTAAAAAACAGTGGCTAT CAGTCTGGACAACCTTGGGGCTATGAGGTGCGCTTACCGGCCAATATTAATGCCAGCAATGATCGCAAAAACAAACAGCC CATTTCGCATTGGCGCAACTTAGGCATTACCTTGGTCGATGGCAGTGAGCTGTCTGATTCACTCAGCAATGCAGGCTTGT TGTTACCCGCCGGCAAAAATGGCCCCGCTTTCTTAGTCGGTCGTAATTTCGATGCGTTTTATGCCTACAATGCTTCTGAG AACTATGCATTAGCCATTGCTCATTTGTCTGATCGTATTGAGCAGCAAAACACCGATGTGGACTTTGCTACGCCTTGGCC AACTGATGATCCAGGCTTAAGCCGTAAACAGTCTCGAGAGCTGCAGCAGGCGCTTAATTTATTGGGTTATGATATTGGCG AAGTTGATGGCATCATCGGTGATGGTACCCGCCGCGCCATTCAGCAATATCAGACCGATAATGGCTTAACCCCCGATGGC AGAGCCGGTAAAAAAATCCATCAGCATTTGATGCACGTTACCGCCAATATGCCGCAGCATGAGAGTGAGCCCGCTGATGA GGCGCAGCATACAGCCGATGATGATCAATTGGCTACCGGCAATGCCCACAGTGCCAGCAAAAAAATCAGCGAAACCAAGT CGGGTCTGAGTAAGTTGCTGCAAATTAAAAGCCTAACGGCCATCTTGATAGGCCTGTTTATTGTGCTGGTCATTGCACTG GTGAGTAGACGCAAACGCTAA
Upstream 100 bases:
>100_bases GCTGACAGATAAGCGTTACAAAGCTGAAACTCTTTGTTTCAAATCGTAGCTTATCTGCTAATATATAGGTTTAGATTTTA TTACTACTGAGCCTGTTGCC
Downstream 100 bases:
>100_bases TGGCGACACGTTTTTGAGTTTCGTTGGTTGTTAATGAAATAGGTTGATTGATGTTGAAATATGAATAGCAAAATGCCAGG CGAGTTTAAGCCTGGCATTT
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSSTKLSAVFPVLSTLGLASLVFIAPTSYAEQKPLPTLDNNQFNVCLDNLSQSSAFASVKDTLAQYRPAQGDPSVLESLD YQPEFQKEPWDYLASLVDEERVIDGIAASERYADVLARIEAQYGVNRYDVLGVWGVESDFGTTLGKKEVVQSLATLSCFG RRQSYFRSEYVSALKILKQGDIAPNDFKGSWAGAFGQTQFMPSTFLQLAQDFDGDGRKDLVNSQADALASTANFLKNSGY QSGQPWGYEVRLPANINASNDRKNKQPISHWRNLGITLVDGSELSDSLSNAGLLLPAGKNGPAFLVGRNFDAFYAYNASE NYALAIAHLSDRIEQQNTDVDFATPWPTDDPGLSRKQSRELQQALNLLGYDIGEVDGIIGDGTRRAIQQYQTDNGLTPDG RAGKKIHQHLMHVTANMPQHESEPADEAQHTADDDQLATGNAHSASKKISETKSGLSKLLQIKSLTAILIGLFIVLVIAL VSRRKR
Sequences:
>Translated_486_residues MSSTKLSAVFPVLSTLGLASLVFIAPTSYAEQKPLPTLDNNQFNVCLDNLSQSSAFASVKDTLAQYRPAQGDPSVLESLD YQPEFQKEPWDYLASLVDEERVIDGIAASERYADVLARIEAQYGVNRYDVLGVWGVESDFGTTLGKKEVVQSLATLSCFG RRQSYFRSEYVSALKILKQGDIAPNDFKGSWAGAFGQTQFMPSTFLQLAQDFDGDGRKDLVNSQADALASTANFLKNSGY QSGQPWGYEVRLPANINASNDRKNKQPISHWRNLGITLVDGSELSDSLSNAGLLLPAGKNGPAFLVGRNFDAFYAYNASE NYALAIAHLSDRIEQQNTDVDFATPWPTDDPGLSRKQSRELQQALNLLGYDIGEVDGIIGDGTRRAIQQYQTDNGLTPDG RAGKKIHQHLMHVTANMPQHESEPADEAQHTADDDQLATGNAHSASKKISETKSGLSKLLQIKSLTAILIGLFIVLVIAL VSRRKR >Mature_485_residues SSTKLSAVFPVLSTLGLASLVFIAPTSYAEQKPLPTLDNNQFNVCLDNLSQSSAFASVKDTLAQYRPAQGDPSVLESLDY QPEFQKEPWDYLASLVDEERVIDGIAASERYADVLARIEAQYGVNRYDVLGVWGVESDFGTTLGKKEVVQSLATLSCFGR RQSYFRSEYVSALKILKQGDIAPNDFKGSWAGAFGQTQFMPSTFLQLAQDFDGDGRKDLVNSQADALASTANFLKNSGYQ SGQPWGYEVRLPANINASNDRKNKQPISHWRNLGITLVDGSELSDSLSNAGLLLPAGKNGPAFLVGRNFDAFYAYNASEN YALAIAHLSDRIEQQNTDVDFATPWPTDDPGLSRKQSRELQQALNLLGYDIGEVDGIIGDGTRRAIQQYQTDNGLTPDGR AGKKIHQHLMHVTANMPQHESEPADEAQHTADDDQLATGNAHSASKKISETKSGLSKLLQIKSLTAILIGLFIVLVIALV SRRKR
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=246, Percent_Identity=32.9268292682927, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 53175; Mature: 53044
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTKLSAVFPVLSTLGLASLVFIAPTSYAEQKPLPTLDNNQFNVCLDNLSQSSAFASVK CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH DTLAQYRPAQGDPSVLESLDYQPEFQKEPWDYLASLVDEERVIDGIAASERYADVLARIE HHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQYGVNRYDVLGVWGVESDFGTTLGKKEVVQSLATLSCFGRRQSYFRSEYVSALKILKQG HHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIAPNDFKGSWAGAFGQTQFMPSTFLQLAQDFDGDGRKDLVNSQADALASTANFLKNSGY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSGQPWGYEVRLPANINASNDRKNKQPISHWRNLGITLVDGSELSDSLSNAGLLLPAGKN CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHCCCCEEEECCCC GPAFLVGRNFDAFYAYNASENYALAIAHLSDRIEQQNTDVDFATPWPTDDPGLSRKQSRE CCEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LQQALNLLGYDIGEVDGIIGDGTRRAIQQYQTDNGLTPDGRAGKKIHQHLMHVTANMPQH HHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC ESEPADEAQHTADDDQLATGNAHSASKKISETKSGLSKLLQIKSLTAILIGLFIVLVIAL CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRRKR HHHCCC >Mature Secondary Structure SSTKLSAVFPVLSTLGLASLVFIAPTSYAEQKPLPTLDNNQFNVCLDNLSQSSAFASVK CCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH DTLAQYRPAQGDPSVLESLDYQPEFQKEPWDYLASLVDEERVIDGIAASERYADVLARIE HHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQYGVNRYDVLGVWGVESDFGTTLGKKEVVQSLATLSCFGRRQSYFRSEYVSALKILKQG HHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIAPNDFKGSWAGAFGQTQFMPSTFLQLAQDFDGDGRKDLVNSQADALASTANFLKNSGY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSGQPWGYEVRLPANINASNDRKNKQPISHWRNLGITLVDGSELSDSLSNAGLLLPAGKN CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHCCCCEEEECCCC GPAFLVGRNFDAFYAYNASENYALAIAHLSDRIEQQNTDVDFATPWPTDDPGLSRKQSRE CCEEEEECCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LQQALNLLGYDIGEVDGIIGDGTRRAIQQYQTDNGLTPDGRAGKKIHQHLMHVTANMPQH HHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC ESEPADEAQHTADDDQLATGNAHSASKKISETKSGLSKLLQIKSLTAILIGLFIVLVIAL CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRRKR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]