| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is lpxP [H]
Identifier: 148653748
GI number: 148653748
Start: 2432315
End: 2433436
Strand: Direct
Name: lpxP [H]
Synonym: PsycPRwf_1951
Alternate gene names: 148653748
Gene position: 2432315-2433436 (Clockwise)
Preceding gene: 148653747
Following gene: 148653750
Centisome position: 81.65
GC content: 47.15
Gene sequence:
>1122_bases GTGCAGCAGTTTGACCCCAAACAAAGCGCGCACGCCTCGCCTGCTGAGACCTCTGTGGCTCAATCTGTTAACAGCTCGGT TAACCAGACCAGTGACAAGGCAGCAGGATCAAAGGCGCTGCCTATCCCTGCTGGGATGCCAAGCATTACTGATAACCATA AGCAGGCACATATAGCAGATAAGAAGCCTTTTAAGTGGCAGTTTTTATTGCCTCAGTACTGGCTGATCTGGCTCATGCTG GCTTTATTTTTGTTGCTGATGTATCTGCCTCTACGCTATCAATTTTGGATAGGTCGTAAGCTGGGTATCATCCTCTATCA TCTGCTACAAGGTCGACGTAGGGATACCTTGGTGAACTTAAGATTGGCCTTTCCTGAAAAAATGGAGGCTGAGCGTGAAC GTATGGCAAAGCAGGTCTTCGTCAATCAAGGCATTGGTATCTTCGAAACCTTGTGTGCTTGGCTGCGCCCGAATGTGTTT ATGCGTACCTTTTCTATTTCAGGGCTTCAGCACTTAGTGCAAGCTCAGCAGCAAGGTAGAGCGGTGTTGTTATTAGGCGC TCACTATACCATGTTGGATTTGGGTGGCCGTTTGTTTACGCAGTTTGCTGCCACTGACTGTGTGTATCGTCCACAAAACA ATCCACTGCTTGACTGGTTCATTTATAATGGTCGCCGCAATATTTTTGATGAGCAGATTGATCACAGCGATATGCGCAAA CTGGTAAACCGTATTAAGCTTGGTAAAATTATCTGGTACTCCCCTGATCAAGATTACGGCTTAAAGCATGGGGTTATGGC ACCCTTTTTTGGCGTACCTGCTGCCACCGTTACTGCTCCTAGACGACTGGCAAAACTGGGCAAGAAGTCTACTCCCCCAG CCGTCATGGCTTTACATACTTACCGTCAGACGCCAGATAATATGCCAAAAGGTAAGCGTCCGCATTACCACCTTACTATT ACACCGATAATAGACGGCTATCCCTCAGCTGATGAAGTCGCTGATGCTACTCGTATCAATGAGGTATTAGAGAGTCTTAT TCGTATTGACCCCACCCAGTGGATGTGGTTTCACAAGCGTTATAAAAACACGCCTAATGGCCGCAGTGACTACTATCGTT GA
Upstream 100 bases:
>100_bases CCGCAAAGCAAGTCCTTAATGAGTTAATATGACTGATTCCAATACCCCCACTCCCAATCCAAAAAAACAGGAATCTAATA AAATTCCTGTTGTTACTTCT
Downstream 100 bases:
>100_bases TTGACACCGATTACCGATTCATTCAGTCAGACATCTAAGTAAAAAGACGCCCCTTTGAAAGAGGCGTCTTTTTTGGTCAA GAAGCTATTGATTAAATAAT
Product: lipid A biosynthesis acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MQQFDPKQSAHASPAETSVAQSVNSSVNQTSDKAAGSKALPIPAGMPSITDNHKQAHIADKKPFKWQFLLPQYWLIWLML ALFLLLMYLPLRYQFWIGRKLGIILYHLLQGRRRDTLVNLRLAFPEKMEAERERMAKQVFVNQGIGIFETLCAWLRPNVF MRTFSISGLQHLVQAQQQGRAVLLLGAHYTMLDLGGRLFTQFAATDCVYRPQNNPLLDWFIYNGRRNIFDEQIDHSDMRK LVNRIKLGKIIWYSPDQDYGLKHGVMAPFFGVPAATVTAPRRLAKLGKKSTPPAVMALHTYRQTPDNMPKGKRPHYHLTI TPIIDGYPSADEVADATRINEVLESLIRIDPTQWMWFHKRYKNTPNGRSDYYR
Sequences:
>Translated_373_residues MQQFDPKQSAHASPAETSVAQSVNSSVNQTSDKAAGSKALPIPAGMPSITDNHKQAHIADKKPFKWQFLLPQYWLIWLML ALFLLLMYLPLRYQFWIGRKLGIILYHLLQGRRRDTLVNLRLAFPEKMEAERERMAKQVFVNQGIGIFETLCAWLRPNVF MRTFSISGLQHLVQAQQQGRAVLLLGAHYTMLDLGGRLFTQFAATDCVYRPQNNPLLDWFIYNGRRNIFDEQIDHSDMRK LVNRIKLGKIIWYSPDQDYGLKHGVMAPFFGVPAATVTAPRRLAKLGKKSTPPAVMALHTYRQTPDNMPKGKRPHYHLTI TPIIDGYPSADEVADATRINEVLESLIRIDPTQWMWFHKRYKNTPNGRSDYYR >Mature_373_residues MQQFDPKQSAHASPAETSVAQSVNSSVNQTSDKAAGSKALPIPAGMPSITDNHKQAHIADKKPFKWQFLLPQYWLIWLML ALFLLLMYLPLRYQFWIGRKLGIILYHLLQGRRRDTLVNLRLAFPEKMEAERERMAKQVFVNQGIGIFETLCAWLRPNVF MRTFSISGLQHLVQAQQQGRAVLLLGAHYTMLDLGGRLFTQFAATDCVYRPQNNPLLDWFIYNGRRNIFDEQIDHSDMRK LVNRIKLGKIIWYSPDQDYGLKHGVMAPFFGVPAATVTAPRRLAKLGKKSTPPAVMALHTYRQTPDNMPKGKRPHYHLTI TPIIDGYPSADEVADATRINEVLESLIRIDPTQWMWFHKRYKNTPNGRSDYYR
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=311, Percent_Identity=34.0836012861736, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1787292, Length=311, Percent_Identity=34.0836012861736, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI1788161, Length=315, Percent_Identity=26.031746031746, Blast_Score=101, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 42951; Mature: 42951
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQFDPKQSAHASPAETSVAQSVNSSVNQTSDKAAGSKALPIPAGMPSITDNHKQAHIAD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC KKPFKWQFLLPQYWLIWLMLALFLLLMYLPLRYQFWIGRKLGIILYHLLQGRRRDTLVNL CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE RLAFPEKMEAERERMAKQVFVNQGIGIFETLCAWLRPNVFMRTFSISGLQHLVQAQQQGR EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC AVLLLGAHYTMLDLGGRLFTQFAATDCVYRPQNNPLLDWFIYNGRRNIFDEQIDHSDMRK EEEEEECCHHHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEECCCCHHHHHHCCHHHHHH LVNRIKLGKIIWYSPDQDYGLKHGVMAPFFGVPAATVTAPRRLAKLGKKSTPPAVMALHT HHHHHHHCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH YRQTPDNMPKGKRPHYHLTITPIIDGYPSADEVADATRINEVLESLIRIDPTQWMWFHKR HHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YKNTPNGRSDYYR HCCCCCCCCCCCC >Mature Secondary Structure MQQFDPKQSAHASPAETSVAQSVNSSVNQTSDKAAGSKALPIPAGMPSITDNHKQAHIAD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC KKPFKWQFLLPQYWLIWLMLALFLLLMYLPLRYQFWIGRKLGIILYHLLQGRRRDTLVNL CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE RLAFPEKMEAERERMAKQVFVNQGIGIFETLCAWLRPNVFMRTFSISGLQHLVQAQQQGR EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC AVLLLGAHYTMLDLGGRLFTQFAATDCVYRPQNNPLLDWFIYNGRRNIFDEQIDHSDMRK EEEEEECCHHHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEECCCCHHHHHHCCHHHHHH LVNRIKLGKIIWYSPDQDYGLKHGVMAPFFGVPAATVTAPRRLAKLGKKSTPPAVMALHT HHHHHHHCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH YRQTPDNMPKGKRPHYHLTITPIIDGYPSADEVADATRINEVLESLIRIDPTQWMWFHKR HHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YKNTPNGRSDYYR HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]