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The map label for this gene is ytsP [H]

Identifier: 148653722

GI number: 148653722

Start: 2392409

End: 2392891

Strand: Direct

Name: ytsP [H]

Synonym: PsycPRwf_1925

Alternate gene names: 148653722

Gene position: 2392409-2392891 (Clockwise)

Preceding gene: 148653721

Following gene: 148653726

Centisome position: 80.31

GC content: 44.31

Gene sequence:

>483_bases
ATGCAAGCAATAAATCCCATTGATCCAAACGCTAACAAAGCTGAAAAGTACCAATTATTATTAAAACAAGCTGAAGCCAT
TATCAGTAGCGAAAGTGATTTAATCGCTAATATGGCCAACCTAACGGCGTTGTTAAAAGATACCTTTAACTGGTTTTGGA
TTGGATTTTATCGGGTCGATAGCAGTGCCAATCAGCTCATTCTTGGTCCGTTTCAAGGTCCGCTGGCTTGCACCCGTATC
CCGCATGGTAAGGGCGTATGTGGCGAGGTCTGGGCGACGGGTACCACTCAAATTGTTGATGATGTCAATGCGCATCCCAA
TCACATCGCCTGCTCCTCCCTATCACAGTCAGAGATTGTGGTACCGATAACAGATGAGGCGGGTGAGATTATCGCAGTAT
TAGATATTGATTCAGATACGTTAGCCACCTTTGATGAGGTCGATGGAGAGTATCTTCAGCAATTGGTTGACCTACTAAAA
TAG

Upstream 100 bases:

>100_bases
CCTCAGACGATTTAGAATGATCACCAGCCGCCATATCATCTGGTTATGCGTAAGTTTAGTTAATAATAAGCATCAATAAT
AAAATAGATAAGAGAATACT

Downstream 100 bases:

>100_bases
TATGTGGGTCGGCAATAGTATAGGGTCGGCACCGATAGTGCTGACCCTATTTTTTTATGTCATATAAAGCCGACTTGTCA
TTTCTTTTTTTTGCCTTGAA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MQAINPIDPNANKAEKYQLLLKQAEAIISSESDLIANMANLTALLKDTFNWFWIGFYRVDSSANQLILGPFQGPLACTRI
PHGKGVCGEVWATGTTQIVDDVNAHPNHIACSSLSQSEIVVPITDEAGEIIAVLDIDSDTLATFDEVDGEYLQQLVDLLK

Sequences:

>Translated_160_residues
MQAINPIDPNANKAEKYQLLLKQAEAIISSESDLIANMANLTALLKDTFNWFWIGFYRVDSSANQLILGPFQGPLACTRI
PHGKGVCGEVWATGTTQIVDDVNAHPNHIACSSLSQSEIVVPITDEAGEIIAVLDIDSDTLATFDEVDGEYLQQLVDLLK
>Mature_160_residues
MQAINPIDPNANKAEKYQLLLKQAEAIISSESDLIANMANLTALLKDTFNWFWIGFYRVDSSANQLILGPFQGPLACTRI
PHGKGVCGEVWATGTTQIVDDVNAHPNHIACSSLSQSEIVVPITDEAGEIIAVLDIDSDTLATFDEVDGEYLQQLVDLLK

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=146, Percent_Identity=42.4657534246575, Blast_Score=114, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6322781, Length=156, Percent_Identity=42.3076923076923, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17429; Mature: 17429

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAINPIDPNANKAEKYQLLLKQAEAIISSESDLIANMANLTALLKDTFNWFWIGFYRVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
SSANQLILGPFQGPLACTRIPHGKGVCGEVWATGTTQIVDDVNAHPNHIACSSLSQSEIV
CCCCEEEEECCCCCEEEEECCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEECCCCCCCEE
VPITDEAGEIIAVLDIDSDTLATFDEVDGEYLQQLVDLLK
EEEECCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure
MQAINPIDPNANKAEKYQLLLKQAEAIISSESDLIANMANLTALLKDTFNWFWIGFYRVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
SSANQLILGPFQGPLACTRIPHGKGVCGEVWATGTTQIVDDVNAHPNHIACSSLSQSEIV
CCCCEEEEECCCCCEEEEECCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEECCCCCCCEE
VPITDEAGEIIAVLDIDSDTLATFDEVDGEYLQQLVDLLK
EEEECCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]