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The map label for this gene is omlA [H]

Identifier: 148653683

GI number: 148653683

Start: 2344377

End: 2344751

Strand: Direct

Name: omlA [H]

Synonym: PsycPRwf_1886

Alternate gene names: 148653683

Gene position: 2344377-2344751 (Clockwise)

Preceding gene: 148653681

Following gene: 148653688

Centisome position: 78.7

GC content: 41.87

Gene sequence:

>375_bases
ATGAATATATTAAAACACTTACTTTATCCTATCGCTCTTACTGCTACTTTGACACTGACCGGTTGTTCTTGGTTTAGCGT
ATATACCATTGACCTGCCTCAGGGCACTCCGATCACTCAAAGCCAAGCCCAGCAAATCCAACCTGGCATGACAAAAAACC
AAGTGCTTTACTACATCGGTAGTCCCGCCATGCGTGACTCACTTGCGCCAAATCGTTGGGATTACATCTATGATTATAAG
CCAGGCACTTACGGTAAACGTGAAGGCAAACAAATAATCAAAAATGCCAGTCAACATCTTATCATTTATTTCGATGATGC
CGATACTGTTATAAAAGTAGAGGGTGTTGAGAGCTTACCACAAACCAAGCCATAA

Upstream 100 bases:

>100_bases
CATTTTATAATTACCAAACTACTGGTAATTCTAGTCACTGTCTTTAATCGCTATGACCCAACTCTAGCGATCACAATGGG
TAACTCTAAAACGTGAAATT

Downstream 100 bases:

>100_bases
GATTTATTGCGCCTTGGCCATTAATGTGTCATAAGTGCTGTTAACCAAAAAGCTTGGATTAACAGCACTGACTTCATATT
CAATAAGCCGCCACCATTTG

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNILKHLLYPIALTATLTLTGCSWFSVYTIDLPQGTPITQSQAQQIQPGMTKNQVLYYIGSPAMRDSLAPNRWDYIYDYK
PGTYGKREGKQIIKNASQHLIIYFDDADTVIKVEGVESLPQTKP

Sequences:

>Translated_124_residues
MNILKHLLYPIALTATLTLTGCSWFSVYTIDLPQGTPITQSQAQQIQPGMTKNQVLYYIGSPAMRDSLAPNRWDYIYDYK
PGTYGKREGKQIIKNASQHLIIYFDDADTVIKVEGVESLPQTKP
>Mature_124_residues
MNILKHLLYPIALTATLTLTGCSWFSVYTIDLPQGTPITQSQAQQIQPGMTKNQVLYYIGSPAMRDSLAPNRWDYIYDYK
PGTYGKREGKQIIKNASQHLIIYFDDADTVIKVEGVESLPQTKP

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 13997; Mature: 13997

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILKHLLYPIALTATLTLTGCSWFSVYTIDLPQGTPITQSQAQQIQPGMTKNQVLYYIG
CCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEC
SPAMRDSLAPNRWDYIYDYKPGTYGKREGKQIIKNASQHLIIYFDDADTVIKVEGVESLP
CCHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCC
QTKP
CCCC
>Mature Secondary Structure
MNILKHLLYPIALTATLTLTGCSWFSVYTIDLPQGTPITQSQAQQIQPGMTKNQVLYYIG
CCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEC
SPAMRDSLAPNRWDYIYDYKPGTYGKREGKQIIKNASQHLIIYFDDADTVIKVEGVESLP
CCHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCC
QTKP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]