Click here to switch to the map view.

The map label for this gene is ytfL [C]

Identifier: 148653645

GI number: 148653645

Start: 2300337

End: 2301611

Strand: Direct

Name: ytfL [C]

Synonym: PsycPRwf_1848

Alternate gene names: 148653645

Gene position: 2300337-2301611 (Clockwise)

Preceding gene: 148653642

Following gene: 148653646

Centisome position: 77.22

GC content: 44.94

Gene sequence:

>1275_bases
ATGACCTTATTTAGTGCGGTTATCTCTATTTTTTTATTGATAGCGATAAGCGCTATCGTATCAAGTTCTGAGCTTGCCTT
AGCTTCTGCCCGAAAAATAAAATTGCAAATACTCGCCAAAGAAGGGGAAGTACGAGCCCTCGATGTGCTCGGTATGCAAG
AAAACCCCGGTAGCTTTATCACCGTCGTACAAGTGTTGTTAAACGCTGTGGCCATTTTGGCCGGTGTCATTGGTGAGTCT
GCCGTTAGCCCCTATCTGCTCGCGCTCATTGGTCATGAAACCTTAGCGTCGGTTTTGTCCTTTATTTTGGTCACCAGTGT
GTTTGTGTTATTCGCCGATCTCATGCCTAAGCGTTTTGCCATGACTTACGCTGAGCCCATTGCCATACGCCTTGTACGTC
CGATGATGATGCTTATTTTTATATTCAAACCCATCATCTGGGTATTTGATGGCGCGGCAGATTTACTGTTTAAACTGATG
GGCATCTCCACCGTTCGCCGAGACGACATGACCTCAGAGGACATCTATGCGGTCATGGATGCAGGCGCTGAGGCAGGGGT
ATTAAAACATCAAGAGCATCATCTGATTGCCAATATCTTTGAGATGCAAGAGCGTACCGTTACCTCAGTAATGACCACGC
GTGAGTATATTATTTATTTCGATTCTAATGAAAAACATGATGTCATCGTCGAGACGATGATTCGTGAACCACACCATAAG
TTTTTGGTGTGTTTAGAAGATGACTTAGAGCAAACCATTGGCTATGTTGAGTCACGTGCCTTTTTGGCCTTGGTGCTACA
AAAAGAGCAGGTGCGTTTGACAGATCCAACCATTCTACGTCCTGCGCTATTTATTCCAGACACCTTATCGCTTTTTGATG
TTCTAGAAACCTTTAAAACCACCGGCTCTGACTTCGCGATTATCGTCAATGAGTATGCGCTTGTGGTGGGCGTCATCACC
CTAAAAGATGTCATGAGTATCGTGATGGGTGAGCTGGTAACGATGGATGAGCAGCCTATTGTACAGCGTACTGAGAACTC
TTGGCTGGTCGATGGCATGACGCCGATTGAAGATGTGATCCGCACCGTAGGCATCATAGATTTGCCCAAGTCGGAGAACT
ACGAGACCATCAGTGGCTTTATGATGTATATGCTGCGTAAAATTCCAAAAAAGACCGATGTCATTGAGCATGGCGGCTTT
AAATTTGAGATTCTAGATACTGAAAACCTCAAAATCAACCAGCTATTGGTGACCAAGATCGAAAGTGATAGCTAA

Upstream 100 bases:

>100_bases
AACAAAACTTGTAGTCCCCCTATCCAGCTTTTTATATTTTCATTTATTATTGGTAACGTTTGCCAAAGTTTTGAGTATAA
AAAGTGTAGAGTTGAATATC

Downstream 100 bases:

>100_bases
CTAGTGATAGCTAACTTACGCCACACCGCTAAAGCCAAGTTTAGTGTTTGAAATAAAGACAGTGCCCTTTGAAGATGGTC
GCTCTTTAAGACAGCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTLFSAVISIFLLIAISAIVSSSELALASARKIKLQILAKEGEVRALDVLGMQENPGSFITVVQVLLNAVAILAGVIGES
AVSPYLLALIGHETLASVLSFILVTSVFVLFADLMPKRFAMTYAEPIAIRLVRPMMMLIFIFKPIIWVFDGAADLLFKLM
GISTVRRDDMTSEDIYAVMDAGAEAGVLKHQEHHLIANIFEMQERTVTSVMTTREYIIYFDSNEKHDVIVETMIREPHHK
FLVCLEDDLEQTIGYVESRAFLALVLQKEQVRLTDPTILRPALFIPDTLSLFDVLETFKTTGSDFAIIVNEYALVVGVIT
LKDVMSIVMGELVTMDEQPIVQRTENSWLVDGMTPIEDVIRTVGIIDLPKSENYETISGFMMYMLRKIPKKTDVIEHGGF
KFEILDTENLKINQLLVTKIESDS

Sequences:

>Translated_424_residues
MTLFSAVISIFLLIAISAIVSSSELALASARKIKLQILAKEGEVRALDVLGMQENPGSFITVVQVLLNAVAILAGVIGES
AVSPYLLALIGHETLASVLSFILVTSVFVLFADLMPKRFAMTYAEPIAIRLVRPMMMLIFIFKPIIWVFDGAADLLFKLM
GISTVRRDDMTSEDIYAVMDAGAEAGVLKHQEHHLIANIFEMQERTVTSVMTTREYIIYFDSNEKHDVIVETMIREPHHK
FLVCLEDDLEQTIGYVESRAFLALVLQKEQVRLTDPTILRPALFIPDTLSLFDVLETFKTTGSDFAIIVNEYALVVGVIT
LKDVMSIVMGELVTMDEQPIVQRTENSWLVDGMTPIEDVIRTVGIIDLPKSENYETISGFMMYMLRKIPKKTDVIEHGGF
KFEILDTENLKINQLLVTKIESDS
>Mature_423_residues
TLFSAVISIFLLIAISAIVSSSELALASARKIKLQILAKEGEVRALDVLGMQENPGSFITVVQVLLNAVAILAGVIGESA
VSPYLLALIGHETLASVLSFILVTSVFVLFADLMPKRFAMTYAEPIAIRLVRPMMMLIFIFKPIIWVFDGAADLLFKLMG
ISTVRRDDMTSEDIYAVMDAGAEAGVLKHQEHHLIANIFEMQERTVTSVMTTREYIIYFDSNEKHDVIVETMIREPHHKF
LVCLEDDLEQTIGYVESRAFLALVLQKEQVRLTDPTILRPALFIPDTLSLFDVLETFKTTGSDFAIIVNEYALVVGVITL
KDVMSIVMGELVTMDEQPIVQRTENSWLVDGMTPIEDVIRTVGIIDLPKSENYETISGFMMYMLRKIPKKTDVIEHGGFK
FEILDTENLKINQLLVTKIESDS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=392, Percent_Identity=23.2142857142857, Blast_Score=131, Evalue=1e-30,
Organism=Escherichia coli, GI1790664, Length=430, Percent_Identity=50.9302325581395, Blast_Score=454, Evalue=1e-129,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=24.5145631067961, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI87082033, Length=261, Percent_Identity=27.9693486590038, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1788119, Length=267, Percent_Identity=26.2172284644195, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786879, Length=258, Percent_Identity=20.9302325581395, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47446; Mature: 47314

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFSAVISIFLLIAISAIVSSSELALASARKIKLQILAKEGEVRALDVLGMQENPGSFI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCHHH
TVVQVLLNAVAILAGVIGESAVSPYLLALIGHETLASVLSFILVTSVFVLFADLMPKRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTYAEPIAIRLVRPMMMLIFIFKPIIWVFDGAADLLFKLMGISTVRRDDMTSEDIYAVMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
AGAEAGVLKHQEHHLIANIFEMQERTVTSVMTTREYIIYFDSNEKHDVIVETMIREPHHK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHCCCCCC
FLVCLEDDLEQTIGYVESRAFLALVLQKEQVRLTDPTILRPALFIPDTLSLFDVLETFKT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHHHHHHHHHHHHC
TGSDFAIIVNEYALVVGVITLKDVMSIVMGELVTMDEQPIVQRTENSWLVDGMTPIEDVI
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCHHHHHH
RTVGIIDLPKSENYETISGFMMYMLRKIPKKTDVIEHGGFKFEILDTENLKINQLLVTKI
HHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCEEEEEEEEEE
ESDS
CCCC
>Mature Secondary Structure 
TLFSAVISIFLLIAISAIVSSSELALASARKIKLQILAKEGEVRALDVLGMQENPGSFI
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCHHH
TVVQVLLNAVAILAGVIGESAVSPYLLALIGHETLASVLSFILVTSVFVLFADLMPKRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTYAEPIAIRLVRPMMMLIFIFKPIIWVFDGAADLLFKLMGISTVRRDDMTSEDIYAVMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
AGAEAGVLKHQEHHLIANIFEMQERTVTSVMTTREYIIYFDSNEKHDVIVETMIREPHHK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHCCCCCC
FLVCLEDDLEQTIGYVESRAFLALVLQKEQVRLTDPTILRPALFIPDTLSLFDVLETFKT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHHHHHHHHHHHHC
TGSDFAIIVNEYALVVGVITLKDVMSIVMGELVTMDEQPIVQRTENSWLVDGMTPIEDVI
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCHHHHHH
RTVGIIDLPKSENYETISGFMMYMLRKIPKKTDVIEHGGFKFEILDTENLKINQLLVTKI
HHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCEEEEEEEEEE
ESDS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]