Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 148653642

GI number: 148653642

Start: 2296583

End: 2297608

Strand: Direct

Name: ydjH [C]

Synonym: PsycPRwf_1845

Alternate gene names: 148653642

Gene position: 2296583-2297608 (Clockwise)

Preceding gene: 148653638

Following gene: 148653645

Centisome position: 77.09

GC content: 49.22

Gene sequence:

>1026_bases
ATGTACGACGTTATGGCTGTAGGAAACGCTTTGGTAGACCACGAATATCTATTAAGCGATGAACAATTGACCTCAACCAG
CTTGGCCAAAGGCAGCATGACCTTGGCCAGTTTGGAGGAGCAAACCCAGTTATTGTCTGAGTTTGAAACCAACGACCTAC
AGCCTTCAAAACAAACTGGCGGTGGCTCGGCAGCCAATGCCATGTTTGCTTTTGCCTGCCTTGGTGGCAAAGCCTTTTAT
GGCTGCCGTGTTGGTAATGACCACGCCGGCCAATTTTATTTAGATGATTTAAATCAAGCTGGTGTCGCCACCTGCAATAC
CAAATCTACGGTAGAAGGCGGCGTGACTGGCTCATGTGTGGTGGCCATTACCCCAGATGGCGAGCGCACCATGCAGACCT
TCTTGGGCACCTCAAGTGAGATTGATGACGCCAATATCGATTTTGAAGCCTTGGCCCAAAGTAAGTGGTTGTATCTAGAA
GGCTATTTGTCCATGTCAGCCAGCCTACACCCTGCCCTACAAAAGCTACGTCAACAGGCCAAAGACAACCATACCAAAAT
TGCGGTAAGCTTCGCTGATCCTGCGGTAGTCAACTTTGCCAAAGATGGCCTGCTACAAATGCTGGGCGATGGCGTTGATG
TGATTTTTTGTAATGTTGAAGAAGCCAAGCTCTTTACTGGAGCAGACGATATTAAAGCGGCAGCCCAAGCACTGACCGAC
TTCTGCCAGTTGGCAGTGGTCACCTCGGGCGCGCAAGATACCATGATTTGTGAGCGCAGCGAAGCGGGCCAATTAAGCCT
AATTCAAGTCGCCACCCCTAAAGTCGATACCGTCATCGATACCAATGGTGCAGGCGATAATTATTCAGGCGCGTTTTTAT
ATGCTTTGGCCAATGACTGTACATTAACTCAGTGCGGTCAATTAGCCGGTCAGGTGGCAAGCCAAGTGGTACAACAGTTT
GGTCCACGTTTGAGCCTTGAGCAGTATCAAAGTATTGCTCAGCAAGTACTGTCTGCCCGTTCTTAG

Upstream 100 bases:

>100_bases
CAGACTACTGCCGCTATGCCCTCCACAATCTGGCTAAATTGCAGTATGATAGCGGCACGATTTTTAAACCCTCATTGACA
CAATATAAGTTGGAATTATT

Downstream 100 bases:

>100_bases
TAGCTTAGTATTAAAGTACTAATGAGTTAAAGTACTAATGAGCTAAAGTAATAAGCAGTCAAAGTAAAAATAAAAAGGCA
AATAACAAAATACAAAATCC

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MYDVMAVGNALVDHEYLLSDEQLTSTSLAKGSMTLASLEEQTQLLSEFETNDLQPSKQTGGGSAANAMFAFACLGGKAFY
GCRVGNDHAGQFYLDDLNQAGVATCNTKSTVEGGVTGSCVVAITPDGERTMQTFLGTSSEIDDANIDFEALAQSKWLYLE
GYLSMSASLHPALQKLRQQAKDNHTKIAVSFADPAVVNFAKDGLLQMLGDGVDVIFCNVEEAKLFTGADDIKAAAQALTD
FCQLAVVTSGAQDTMICERSEAGQLSLIQVATPKVDTVIDTNGAGDNYSGAFLYALANDCTLTQCGQLAGQVASQVVQQF
GPRLSLEQYQSIAQQVLSARS

Sequences:

>Translated_341_residues
MYDVMAVGNALVDHEYLLSDEQLTSTSLAKGSMTLASLEEQTQLLSEFETNDLQPSKQTGGGSAANAMFAFACLGGKAFY
GCRVGNDHAGQFYLDDLNQAGVATCNTKSTVEGGVTGSCVVAITPDGERTMQTFLGTSSEIDDANIDFEALAQSKWLYLE
GYLSMSASLHPALQKLRQQAKDNHTKIAVSFADPAVVNFAKDGLLQMLGDGVDVIFCNVEEAKLFTGADDIKAAAQALTD
FCQLAVVTSGAQDTMICERSEAGQLSLIQVATPKVDTVIDTNGAGDNYSGAFLYALANDCTLTQCGQLAGQVASQVVQQF
GPRLSLEQYQSIAQQVLSARS
>Mature_341_residues
MYDVMAVGNALVDHEYLLSDEQLTSTSLAKGSMTLASLEEQTQLLSEFETNDLQPSKQTGGGSAANAMFAFACLGGKAFY
GCRVGNDHAGQFYLDDLNQAGVATCNTKSTVEGGVTGSCVVAITPDGERTMQTFLGTSSEIDDANIDFEALAQSKWLYLE
GYLSMSASLHPALQKLRQQAKDNHTKIAVSFADPAVVNFAKDGLLQMLGDGVDVIFCNVEEAKLFTGADDIKAAAQALTD
FCQLAVVTSGAQDTMICERSEAGQLSLIQVATPKVDTVIDTNGAGDNYSGAFLYALANDCTLTQCGQLAGQVASQVVQQF
GPRLSLEQYQSIAQQVLSARS

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484975, Length=342, Percent_Identity=23.6842105263158, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI32484973, Length=342, Percent_Identity=23.6842105263158, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87081971, Length=298, Percent_Identity=27.5167785234899, Blast_Score=85, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6322565, Length=341, Percent_Identity=25.2199413489736, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355521, Length=340, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 36132; Mature: 36132

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDVMAVGNALVDHEYLLSDEQLTSTSLAKGSMTLASLEEQTQLLSEFETNDLQPSKQTG
CCCHHHHCCHHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGSAANAMFAFACLGGKAFYGCRVGNDHAGQFYLDDLNQAGVATCNTKSTVEGGVTGSCV
CCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCEEE
VAITPDGERTMQTFLGTSSEIDDANIDFEALAQSKWLYLEGYLSMSASLHPALQKLRQQA
EEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEEHHCCCHHHHHHHHHHHHH
KDNHTKIAVSFADPAVVNFAKDGLLQMLGDGVDVIFCNVEEAKLFTGADDIKAAAQALTD
CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCHHEEECCCHHHHHHHHHHHH
FCQLAVVTSGAQDTMICERSEAGQLSLIQVATPKVDTVIDTNGAGDNYSGAFLYALANDC
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCC
TLTQCGQLAGQVASQVVQQFGPRLSLEQYQSIAQQVLSARS
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYDVMAVGNALVDHEYLLSDEQLTSTSLAKGSMTLASLEEQTQLLSEFETNDLQPSKQTG
CCCHHHHCCHHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGSAANAMFAFACLGGKAFYGCRVGNDHAGQFYLDDLNQAGVATCNTKSTVEGGVTGSCV
CCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCEEE
VAITPDGERTMQTFLGTSSEIDDANIDFEALAQSKWLYLEGYLSMSASLHPALQKLRQQA
EEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEEHHCCCHHHHHHHHHHHHH
KDNHTKIAVSFADPAVVNFAKDGLLQMLGDGVDVIFCNVEEAKLFTGADDIKAAAQALTD
CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCHHEEECCCHHHHHHHHHHHH
FCQLAVVTSGAQDTMICERSEAGQLSLIQVATPKVDTVIDTNGAGDNYSGAFLYALANDC
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCC
TLTQCGQLAGQVASQVVQQFGPRLSLEQYQSIAQQVLSARS
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]