| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653416
Identifier: 148653416
GI number: 148653416
Start: 1999978
End: 2000706
Strand: Direct
Name: 148653416
Synonym: PsycPRwf_1618
Alternate gene names: NA
Gene position: 1999978-2000706 (Clockwise)
Preceding gene: 148653413
Following gene: 148653418
Centisome position: 67.14
GC content: 45.54
Gene sequence:
>729_bases ATGATTATGGCAAACCCTATTGTCAGCCGTACCGAACTTGCGGTGGGTGGTAAAACCATGACCGTCCAAGGCGTGGTACA AAAAACCAGCTTTTTATTGGGACTGAGCGCTATTGCCGCTTTGGGCTTTTTCTTCTTTATCATCCGTGGCGGTATTAGCG GTGGCATGGCACAAATGATTACCTTTGGCAGTATGTTTGCCGCCTTTGGTCTAGCCTTGTTTATTACATTTAGACCCCAA AAAGCCAAAGCTTTGGCCGCCCCTTACGCCATTTTAGAAGGTCTATTTTTAGGCGGTGTCTCTATCATGTTCATGGGTAT TGATCCAAGTATTCCTGCTAACGCATTGGCCGCTACCTTTGTCACAGCTGCTGTTATGCTGGGCTTGTACCGCTCAGGCA TGATTAAGGTCAATGAAAAATTTCGCTCAATCATGATGTCGGCTATTTTTGCCATCATGCTGATCTACATCGTTCAGTGG GGCTTTGTATTATTTGGCTCAACCCTGCCTTTCTTGTTCCAAACTGGCGGTCTTGTGGCTATCGGCTTTAGCTTATTTGT GGTGGTGGTGGCCTCATTTAGCTTGCTGCTGGATTTTGATAACATTGAGCGCGGTGTGGCAGCGGGCATATCAGAAGAGT ACGAATGGATTTTTGGTATCGGTATATTAGCCACCCTAGTATGGATGTACTTTGAATTTATGCGTCTGTTAAGCCACTTC CAAGATTAA
Upstream 100 bases:
>100_bases ATGGTCGATAACTGGCTGTAAAAAACAGCTAAGACTGACTTAAAATTTACAGCATCTTATTAAATAAATTATTAATCAAC CTCATTAATTAAAGGATTCA
Downstream 100 bases:
>100_bases GCGGTAAACAAAGTAGCCTGCTTACGCTATTTTTTAATCAATAAAATCAAAAAGGTCGCCTCACTTGAGGCGACCTTTTT TTATGCAGGCCATTTTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIMANPIVSRTELAVGGKTMTVQGVVQKTSFLLGLSAIAALGFFFFIIRGGISGGMAQMITFGSMFAAFGLALFITFRPQ KAKALAAPYAILEGLFLGGVSIMFMGIDPSIPANALAATFVTAAVMLGLYRSGMIKVNEKFRSIMMSAIFAIMLIYIVQW GFVLFGSTLPFLFQTGGLVAIGFSLFVVVVASFSLLLDFDNIERGVAAGISEEYEWIFGIGILATLVWMYFEFMRLLSHF QD
Sequences:
>Translated_242_residues MIMANPIVSRTELAVGGKTMTVQGVVQKTSFLLGLSAIAALGFFFFIIRGGISGGMAQMITFGSMFAAFGLALFITFRPQ KAKALAAPYAILEGLFLGGVSIMFMGIDPSIPANALAATFVTAAVMLGLYRSGMIKVNEKFRSIMMSAIFAIMLIYIVQW GFVLFGSTLPFLFQTGGLVAIGFSLFVVVVASFSLLLDFDNIERGVAAGISEEYEWIFGIGILATLVWMYFEFMRLLSHF QD >Mature_242_residues MIMANPIVSRTELAVGGKTMTVQGVVQKTSFLLGLSAIAALGFFFFIIRGGISGGMAQMITFGSMFAAFGLALFITFRPQ KAKALAAPYAILEGLFLGGVSIMFMGIDPSIPANALAATFVTAAVMLGLYRSGMIKVNEKFRSIMMSAIFAIMLIYIVQW GFVLFGSTLPFLFQTGGLVAIGFSLFVVVVASFSLLLDFDNIERGVAAGISEEYEWIFGIGILATLVWMYFEFMRLLSHF QD
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26227; Mature: 26227
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMANPIVSRTELAVGGKTMTVQGVVQKTSFLLGLSAIAALGFFFFIIRGGISGGMAQMI CCCCCCCCCHHHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH TFGSMFAAFGLALFITFRPQKAKALAAPYAILEGLFLGGVSIMFMGIDPSIPANALAATF HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH VTAAVMLGLYRSGMIKVNEKFRSIMMSAIFAIMLIYIVQWGFVLFGSTLPFLFQTGGLVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH IGFSLFVVVVASFSLLLDFDNIERGVAAGISEEYEWIFGIGILATLVWMYFEFMRLLSHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QD CC >Mature Secondary Structure MIMANPIVSRTELAVGGKTMTVQGVVQKTSFLLGLSAIAALGFFFFIIRGGISGGMAQMI CCCCCCCCCHHHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH TFGSMFAAFGLALFITFRPQKAKALAAPYAILEGLFLGGVSIMFMGIDPSIPANALAATF HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH VTAAVMLGLYRSGMIKVNEKFRSIMMSAIFAIMLIYIVQWGFVLFGSTLPFLFQTGGLVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH IGFSLFVVVVASFSLLLDFDNIERGVAAGISEEYEWIFGIGILATLVWMYFEFMRLLSHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA