Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653412

Identifier: 148653412

GI number: 148653412

Start: 1995895

End: 1996269

Strand: Direct

Name: 148653412

Synonym: PsycPRwf_1614

Alternate gene names: NA

Gene position: 1995895-1996269 (Clockwise)

Preceding gene: 148653411

Following gene: 148653413

Centisome position: 67.0

GC content: 42.67

Gene sequence:

>375_bases
ATGAGTATCCGACATTCTGACGTGTCTGCACTGCTAAACGGACTAAACAAAAAAGCCATTGGATTTAATGATGTGCTTAA
CTTTATTGATGACTTTTATCGCTATACCCCAGTCAAATTTAGTAATGGTGACTTGGTCAATGCTGTGGGTCAAAACGAAG
GTAGCGCAAAGGTATTTGGCTTTGCCAAGCACCATGGTTTAAATCAATTAGATACCCTAAAGCTGTTTGCAGAGCATTAT
GATGCTGTTGTTGCAGCGCCTAAAGGCACAGACCACCCGAATATCCGTAACTTTATTCATTGGGGCTGGCAGGGCTTTTT
GATGGAACACAATCCATTAACCGCCCGCCCGAGCGTCGATGTAAAAAACATCTAA

Upstream 100 bases:

>100_bases
AGCTATTTTTTTAGCTGACAAAGCGCCCAAGCTTACGGTTTTTATTGCGTATGACACTGCGCTTTTAACAGATCGTTTTT
TAATTGATAATGAGGCCATT

Downstream 100 bases:

>100_bases
AGCTTAGATAAATGTTGACTTCCTCCCCTCCCTAAAGTGAGGGGATTCCTACAGCTAGACGGTCAAGCCCGACCGCAAAT
CTTAGAGGTGGCTACCGCCT

Product: HopJ type III effector protein

Products: NA

Alternate protein names: Type III Effector HopPmaJ; Cytoplasmic Protein; Type III Effector; Hopj Type III Effector Protein; HopJ Type III Effector Family Protein; HopJ1 Protein

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSIRHSDVSALLNGLNKKAIGFNDVLNFIDDFYRYTPVKFSNGDLVNAVGQNEGSAKVFGFAKHHGLNQLDTLKLFAEHY
DAVVAAPKGTDHPNIRNFIHWGWQGFLMEHNPLTARPSVDVKNI

Sequences:

>Translated_124_residues
MSIRHSDVSALLNGLNKKAIGFNDVLNFIDDFYRYTPVKFSNGDLVNAVGQNEGSAKVFGFAKHHGLNQLDTLKLFAEHY
DAVVAAPKGTDHPNIRNFIHWGWQGFLMEHNPLTARPSVDVKNI
>Mature_123_residues
SIRHSDVSALLNGLNKKAIGFNDVLNFIDDFYRYTPVKFSNGDLVNAVGQNEGSAKVFGFAKHHGLNQLDTLKLFAEHYD
AVVAAPKGTDHPNIRNFIHWGWQGFLMEHNPLTARPSVDVKNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13863; Mature: 13732

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRHSDVSALLNGLNKKAIGFNDVLNFIDDFYRYTPVKFSNGDLVNAVGQNEGSAKVFG
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEE
FAKHHGLNQLDTLKLFAEHYDAVVAAPKGTDHPNIRNFIHWGWQGFLMEHNPLTARPSVD
EHHHCCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC
VKNI
CCCC
>Mature Secondary Structure 
SIRHSDVSALLNGLNKKAIGFNDVLNFIDDFYRYTPVKFSNGDLVNAVGQNEGSAKVFG
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEE
FAKHHGLNQLDTLKLFAEHYDAVVAAPKGTDHPNIRNFIHWGWQGFLMEHNPLTARPSVD
EHHHCCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC
VKNI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA