Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653408

Identifier: 148653408

GI number: 148653408

Start: 1988720

End: 1990360

Strand: Direct

Name: 148653408

Synonym: PsycPRwf_1610

Alternate gene names: NA

Gene position: 1988720-1990360 (Clockwise)

Preceding gene: 148653406

Following gene: 148653409

Centisome position: 66.76

GC content: 47.23

Gene sequence:

>1641_bases
ATGAGCTCACCCTTGTCTTCTACCCCCAAAAAAGACAGCGACAACCTAGGCATGATTACGGTACCGTATTTTCAATTTGT
GCCCAATGCGGCAAGCTATGCTTTTGACAAGGTAAGCTATAAAGCGGTGCCCAATAAAAAAATTCATTGTCACTGCCCCC
TCATTATCATTGAAGCAAATTGGATAAATGAGCCTATGATGGATGTGGCGGTGGCAAGCTTGGAGGAAGAAGAGGCAGCA
GCAGAGCATCAAATAGCGGCCAAAGAAAAAGAGCGCTTGGACTATCTGGCAAGCCAAAAAGCCGATCCGAGTAATAAGAC
TCAGCAAGCCGTGTTGGCAGCTAAGCAACTGATCACTGAAGCTGAAGATGTTGAGGAAGCAGGGTTAAGCGCCCCAGATT
CTGATAGCGATGTTCTGGATACTCAAAATCCGGAGACTCAACATCTTGATACTCAGAGCATGGCGGCCGTTGAAGCTGAT
GAGCCTGAGTTACCTGAAGAGGATAAGCCGTCAGAAGAGATCAGTGAGGAGGATCAATTAAAAAAGGATAAAGAAGCCAA
GCTTGAGTCTTATAAGCAGTTCGTTGCTGAGCAGCAAAGTCAGGTAGATATCGACTATCAAGGCATACGGGTCAATATCG
AGGCCAATGCTCTCCCCAGTCGCATGTATTTTATTATGAATGCTTTGTCTGCCATTATTGCCAGCTACGGCTTGGTGATT
AACTCAGCAGCAGTGGTCATTGGCGCTATGCTGGTGGCCATGATGCTAGGCCCGATAAGTGGTGTGGCCTTGGCGATTAT
TGATTACCGTATGCCTTTTTTACGAAAATCACTTTTGACGGTACTTGCTGGTGGCGCTATGGTGGTAGTCATCGGCTTTG
TGGTGGGTTTTATACACCAAGATACTCCTTTAACCAATGAGATTTTGTCGCGTACTCAGCCCACGTCAATGGACTTAATG
ATTGCCTTGGCTGGCGGGACTGCAGGCGCATACGCCATGATCTCTCCGCACCTATCTGTGGCTGTGGTCGGTGTCGCTGT
GGCAACCGCTTTGGTACCGCCGTTAGCCGCCAGTGGTATATTGTTTGCGCATGGAGAAGGTACGCTTGGCTTAGGTGCTC
TGTTATTGGCCCTGACCAACATCATTGCCATTCAATTTACCAATGCCTTGGTATTGTGGTTTACTGGATTTCGTAGGCTG
ATGGAAGACGATTACAAAAGCAATCCAACTTTGGCCTTCTTACGTCGTAATGCGGTGCCTTTATTACTGTTGACCAGTAT
CGGTGTGTATTTGACCTATAACTTTAATGCCATTACCAAAAAGCAAAACTTTGAAACTCAGGTCAAAGAAAGCATCAATG
ATTATTTTATCGACCAAGGCAACTCGCTAACAGCTACCCAGTTTGTTAATCGAGATGGCTATCAAATGGTACGTGCTGTG
GTACGCGGTGAGACTCGCCCCTCGCCTAGAGATGCTCAGCAATTAGAGCGCCAGATTAATGACAACCTCATGCCAGCTTA
TCCCAAGCAGTCTCCTGTGCGTATCCAGCTGCGTTATATGCCAGTGGTGGTCATTGACTCTAGCCCCGGCCACGGTGAGG
AGCTAGATAAGACCGATGCGGCTATTTTGGCCAATGAATAA

Upstream 100 bases:

>100_bases
TTAAATTAACGGTTCTGAGTCAAAGCGGCATTATTTTTATTTAAAATAGCTTAGCGTGCTTTGATATAACCCACCTAACT
TGATAATCACAGGCGCTTAT

Downstream 100 bases:

>100_bases
CCGATACAGACACTTGAGTCATATGCCTTAATAGCAATTTATGCCAATAGTCATGTTTTGGCGTTAAATATGCTAAACTT
TGTCGCTATTATTTATAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MSSPLSSTPKKDSDNLGMITVPYFQFVPNAASYAFDKVSYKAVPNKKIHCHCPLIIIEANWINEPMMDVAVASLEEEEAA
AEHQIAAKEKERLDYLASQKADPSNKTQQAVLAAKQLITEAEDVEEAGLSAPDSDSDVLDTQNPETQHLDTQSMAAVEAD
EPELPEEDKPSEEISEEDQLKKDKEAKLESYKQFVAEQQSQVDIDYQGIRVNIEANALPSRMYFIMNALSAIIASYGLVI
NSAAVVIGAMLVAMMLGPISGVALAIIDYRMPFLRKSLLTVLAGGAMVVVIGFVVGFIHQDTPLTNEILSRTQPTSMDLM
IALAGGTAGAYAMISPHLSVAVVGVAVATALVPPLAASGILFAHGEGTLGLGALLLALTNIIAIQFTNALVLWFTGFRRL
MEDDYKSNPTLAFLRRNAVPLLLLTSIGVYLTYNFNAITKKQNFETQVKESINDYFIDQGNSLTATQFVNRDGYQMVRAV
VRGETRPSPRDAQQLERQINDNLMPAYPKQSPVRIQLRYMPVVVIDSSPGHGEELDKTDAAILANE

Sequences:

>Translated_546_residues
MSSPLSSTPKKDSDNLGMITVPYFQFVPNAASYAFDKVSYKAVPNKKIHCHCPLIIIEANWINEPMMDVAVASLEEEEAA
AEHQIAAKEKERLDYLASQKADPSNKTQQAVLAAKQLITEAEDVEEAGLSAPDSDSDVLDTQNPETQHLDTQSMAAVEAD
EPELPEEDKPSEEISEEDQLKKDKEAKLESYKQFVAEQQSQVDIDYQGIRVNIEANALPSRMYFIMNALSAIIASYGLVI
NSAAVVIGAMLVAMMLGPISGVALAIIDYRMPFLRKSLLTVLAGGAMVVVIGFVVGFIHQDTPLTNEILSRTQPTSMDLM
IALAGGTAGAYAMISPHLSVAVVGVAVATALVPPLAASGILFAHGEGTLGLGALLLALTNIIAIQFTNALVLWFTGFRRL
MEDDYKSNPTLAFLRRNAVPLLLLTSIGVYLTYNFNAITKKQNFETQVKESINDYFIDQGNSLTATQFVNRDGYQMVRAV
VRGETRPSPRDAQQLERQINDNLMPAYPKQSPVRIQLRYMPVVVIDSSPGHGEELDKTDAAILANE
>Mature_545_residues
SSPLSSTPKKDSDNLGMITVPYFQFVPNAASYAFDKVSYKAVPNKKIHCHCPLIIIEANWINEPMMDVAVASLEEEEAAA
EHQIAAKEKERLDYLASQKADPSNKTQQAVLAAKQLITEAEDVEEAGLSAPDSDSDVLDTQNPETQHLDTQSMAAVEADE
PELPEEDKPSEEISEEDQLKKDKEAKLESYKQFVAEQQSQVDIDYQGIRVNIEANALPSRMYFIMNALSAIIASYGLVIN
SAAVVIGAMLVAMMLGPISGVALAIIDYRMPFLRKSLLTVLAGGAMVVVIGFVVGFIHQDTPLTNEILSRTQPTSMDLMI
ALAGGTAGAYAMISPHLSVAVVGVAVATALVPPLAASGILFAHGEGTLGLGALLLALTNIIAIQFTNALVLWFTGFRRLM
EDDYKSNPTLAFLRRNAVPLLLLTSIGVYLTYNFNAITKKQNFETQVKESINDYFIDQGNSLTATQFVNRDGYQMVRAVV
RGETRPSPRDAQQLERQINDNLMPAYPKQSPVRIQLRYMPVVVIDSSPGHGEELDKTDAAILANE

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19921100, Length=210, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 59552; Mature: 59421

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPLSSTPKKDSDNLGMITVPYFQFVPNAASYAFDKVSYKAVPNKKIHCHCPLIIIEAN
CCCCCCCCCCCCCCCCCEEEECHHHHCCCHHHHHHHHCEEEECCCCEEEEECCEEEEECC
WINEPMMDVAVASLEEEEAAAEHQIAAKEKERLDYLASQKADPSNKTQQAVLAAKQLITE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AEDVEEAGLSAPDSDSDVLDTQNPETQHLDTQSMAAVEADEPELPEEDKPSEEISEEDQL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHCCHHHHH
KKDKEAKLESYKQFVAEQQSQVDIDYQGIRVNIEANALPSRMYFIMNALSAIIASYGLVI
HHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
NSAAVVIGAMLVAMMLGPISGVALAIIDYRMPFLRKSLLTVLAGGAMVVVIGFVVGFIHQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DTPLTNEILSRTQPTSMDLMIALAGGTAGAYAMISPHLSVAVVGVAVATALVPPLAASGI
CCCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCE
LFAHGEGTLGLGALLLALTNIIAIQFTNALVLWFTGFRRLMEDDYKSNPTLAFLRRNAVP
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
LLLLTSIGVYLTYNFNAITKKQNFETQVKESINDYFIDQGNSLTATQFVNRDGYQMVRAV
CHHEECCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHH
VRGETRPSPRDAQQLERQINDNLMPAYPKQSPVRIQLRYMPVVVIDSSPGHGEELDKTDA
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC
AILANE
EEEECC
>Mature Secondary Structure 
SSPLSSTPKKDSDNLGMITVPYFQFVPNAASYAFDKVSYKAVPNKKIHCHCPLIIIEAN
CCCCCCCCCCCCCCCCEEEECHHHHCCCHHHHHHHHCEEEECCCCEEEEECCEEEEECC
WINEPMMDVAVASLEEEEAAAEHQIAAKEKERLDYLASQKADPSNKTQQAVLAAKQLITE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AEDVEEAGLSAPDSDSDVLDTQNPETQHLDTQSMAAVEADEPELPEEDKPSEEISEEDQL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHCCHHHHH
KKDKEAKLESYKQFVAEQQSQVDIDYQGIRVNIEANALPSRMYFIMNALSAIIASYGLVI
HHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
NSAAVVIGAMLVAMMLGPISGVALAIIDYRMPFLRKSLLTVLAGGAMVVVIGFVVGFIHQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DTPLTNEILSRTQPTSMDLMIALAGGTAGAYAMISPHLSVAVVGVAVATALVPPLAASGI
CCCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCE
LFAHGEGTLGLGALLLALTNIIAIQFTNALVLWFTGFRRLMEDDYKSNPTLAFLRRNAVP
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
LLLLTSIGVYLTYNFNAITKKQNFETQVKESINDYFIDQGNSLTATQFVNRDGYQMVRAV
CHHEECCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHH
VRGETRPSPRDAQQLERQINDNLMPAYPKQSPVRIQLRYMPVVVIDSSPGHGEELDKTDA
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC
AILANE
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]