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The map label for this gene is azlC [H]

Identifier: 148653341

GI number: 148653341

Start: 1888886

End: 1889635

Strand: Direct

Name: azlC [H]

Synonym: PsycPRwf_1543

Alternate gene names: 148653341

Gene position: 1888886-1889635 (Clockwise)

Preceding gene: 148653339

Following gene: 148653342

Centisome position: 63.41

GC content: 47.6

Gene sequence:

>750_bases
GTGACTTCTCATTCCAACACCTCATCTATCGAACACCAGTCCCAACATGATTGGGCACAAGGATTCAAAAAAAGCATACC
TGTCGCCATGGGGTACTTACCTGCCGGGATAGCCTTTGGCGTATTAGCTCAAGTGGCAGGCCTTCCGTTTTGGGCCACCA
TCATGTTAAGTGTGCTGCTTTATGCCGGTGCCGCTCAATATGCTTGCCTGCCTATGCTCAGTGCCGGTATGCCCATTGGT
AGTATGGCCACCAACATTGCCGCCATTAATTTGCGTCACGTCTTTTATGGCATGCCCCTATTACAATCTTTGCCCGATAA
CAAGCTGGCCAAAACTTACTGTCTGTTTGCGCTTACCGACGAGACCTTCTCCGTCATGACCAGCTTGCCTCAACCCTTGC
GAAAGACTTTAATGCTACCTATTAGCCTTTTTAACCAAATCTGGTGGGTAGTAGCAGGTGGCATCGGCTTCATACTCGGC
GGCACCCTAAGCGACTTAATCCCCAATTTGGATTTTGCGTTGGTCTGCTTATTTGCCATCTTGGCCTATGAACAGTTTCA
AAGCATCAAACGCTATTTTCCTATTGGCATTGCCATCTTATCTTTAATCATTGCCTCGCAATTTACCAGCAGCTGGGTAC
TGTTAATGGCCATTACGCTGTGTATGTTATTTATCTTAGTACGCGGATTTTGGGCAGCGCAGCATCCCCCCGAAATAACC
CATAAAAAAGGAGATGGCCATGAGCAGTAG

Upstream 100 bases:

>100_bases
AACGGCTTTGTTATAACAAAAAGCGCAGGTTAATTTGCCCATTAAGGACAGGCTACTTGGATTTCATAAGCTTAAAATAT
AGTCAATATTAGGATGCCCT

Downstream 100 bases:

>100_bases
CTATCTGATTTTTGCCACGTTAGCGATGGCCGGGGTGACCTTCATCACTCGGGCGCTGCCTGCATTAATTCCTAGACGGC
TGCTGGACACACCTTGGCTG

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTSHSNTSSIEHQSQHDWAQGFKKSIPVAMGYLPAGIAFGVLAQVAGLPFWATIMLSVLLYAGAAQYACLPMLSAGMPIG
SMATNIAAINLRHVFYGMPLLQSLPDNKLAKTYCLFALTDETFSVMTSLPQPLRKTLMLPISLFNQIWWVVAGGIGFILG
GTLSDLIPNLDFALVCLFAILAYEQFQSIKRYFPIGIAILSLIIASQFTSSWVLLMAITLCMLFILVRGFWAAQHPPEIT
HKKGDGHEQ

Sequences:

>Translated_249_residues
MTSHSNTSSIEHQSQHDWAQGFKKSIPVAMGYLPAGIAFGVLAQVAGLPFWATIMLSVLLYAGAAQYACLPMLSAGMPIG
SMATNIAAINLRHVFYGMPLLQSLPDNKLAKTYCLFALTDETFSVMTSLPQPLRKTLMLPISLFNQIWWVVAGGIGFILG
GTLSDLIPNLDFALVCLFAILAYEQFQSIKRYFPIGIAILSLIIASQFTSSWVLLMAITLCMLFILVRGFWAAQHPPEIT
HKKGDGHEQ
>Mature_248_residues
TSHSNTSSIEHQSQHDWAQGFKKSIPVAMGYLPAGIAFGVLAQVAGLPFWATIMLSVLLYAGAAQYACLPMLSAGMPIGS
MATNIAAINLRHVFYGMPLLQSLPDNKLAKTYCLFALTDETFSVMTSLPQPLRKTLMLPISLFNQIWWVVAGGIGFILGG
TLSDLIPNLDFALVCLFAILAYEQFQSIKRYFPIGIAILSLIIASQFTSSWVLLMAITLCMLFILVRGFWAAQHPPEITH
KKGDGHEQ

Specific function: Involved in branched-chain amino acid transport [H]

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=230, Percent_Identity=29.1304347826087, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 27269; Mature: 27137

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure 
TSHSNTSSIEHQSQHDWAQGFKKSIPVAMGYLPAGIAFGVLAQVAGLPFWATIMLSVLL
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YAGAAQYACLPMLSAGMPIGSMATNIAAINLRHVFYGMPLLQSLPDNKLAKTYCLFALTD
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCH
ETFSVMTSLPQPLRKTLMLPISLFNQIWWVVAGGIGFILGGTLSDLIPNLDFALVCLFAI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LAYEQFQSIKRYFPIGIAILSLIIASQFTSSWVLLMAITLCMLFILVRGFWAAQHPPEIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HKKGDGHEQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]