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The map label for this gene is ydjN [C]

Identifier: 148653263

GI number: 148653263

Start: 1791913

End: 1793268

Strand: Direct

Name: ydjN [C]

Synonym: PsycPRwf_1461

Alternate gene names: 148653263

Gene position: 1791913-1793268 (Clockwise)

Preceding gene: 148653261

Following gene: 148653264

Centisome position: 60.15

GC content: 46.24

Gene sequence:

>1356_bases
ATGCTTGTTTTTGTCTTATTGATCCTCTTTGTTGGCCTGCTGTACGGTCTATGGCGTTATCATCGTCAAAGCGATTCGTT
AAGCCGCAGTGTGTTTTTAGGCCTATTTCTTGGGGTTATCTATGGGCTGGTAATATCGAGCCTAGGATTGGATACAGAAA
GCTTTTTACCTTGGGTAAATATCGTTGGTAATGGCTATGTGAATTTATTAAAAATGATAGCAATGCCTTTGGTATTTATC
TCCATCTTGGCAGCCATTGCTCGATTAGAAAAAGCCTCTATGATTGGTTCGATGAGCTTTTGGATTATCAGCACCTTAAT
CATTACTACCGGTATCGCAGCCTTTGACGGGGCGATTATTGCCAATTTATTCCACCTTGATGCCAGCTCTATTGTGGCCG
GTGAGCAAGAGATAGCTCGTAGCCAAAGTATCATAGAAAGCAGCAGCCAAGTGGCCGATTTGACCATTCCGGGCCTGATT
TTAAGCTTTATACCGACCAGCATTGGCGGCACCTTAGCCGGTCTTGAAAGCACCTCAATGATTTCAGCTGTGGTCATCGC
AAGCTTATTGGGTATCGCCGCTTTAACCGTTAATAAAAATGACCCTGAAAAAGGTGCCATGATTATCAAAGGTATCGATA
TCGCTCAAAGCTGGGTTATGGCGTTGGTACGCTTAATCATCCGCCTAACGCCTTATGGTATCTTAGCGCTCATGATTAAA
GTCATTGTCACCACTGATGCCGGCGCTATTTGGCAATTGGCCAAATTCTTAATCGCCTCTTATGTTGCACTATTTATTAT
GCTTATTGTGCACGCCTTGATTATTACGCTTACTGGACGCTCGCCCATTAGCCACTTTAAGAAAATCGCTCCGGTATTGA
CCTTTGCCTTTACCTCACGTAGCTCTGCGGCAACCATACCGCTAAGTATCGATGCGCAAGTCAATGAGCTGGGTATTGCC
AAGCCAATTGCTAACTTTTCAGCATCCTTTGGTTCAACCATTGGTCAAAATGGCTGTGCAGGTGTGTATCCTGCGATGTT
AGCAATGATGATTGCCCCCACTATGGGCATTGACCCTTGGTCTATGAGTTTTATTGCCTCCGTCGTGGGCATCTCTATGA
TTGCCTCATTTGGGGTGGCAGGTGTCGGCGGTGGCGCAACTTTTGCGGCCATTATCGTGCTGTCGACATTAGGTATGCCA
CTAGAGCTGGCTGGCCTGCTGATTTCTATTGAGCCACTTATCGATATGATGCGTACTTTGGTTAACGTCAGCGGCTCGAT
TACCGCAGGCGTGGTCGGCAATAAGGTACTGGGTGATGTGGCGCATCATGCAGACTATCAAGGCCAGCCTAGCTGA

Upstream 100 bases:

>100_bases
TCCCTTATAACCTAAAGGAATAATAACTCCTCTATTTAGCGCTAGACCTTATCCTACAAGTCTGGATAATAGTCCGTTTG
TTTTGATTGCGGAGTTTGAG

Downstream 100 bases:

>100_bases
CTTTAACGCTGACTTTAACCCAGCCTATATTTAAGCTGTTACAAATCAGCCCAGCCATTAAATCTTACCGATATTCGCCC
CATAATTTGACCACAATTTA

Product: sodium:dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MLVFVLLILFVGLLYGLWRYHRQSDSLSRSVFLGLFLGVIYGLVISSLGLDTESFLPWVNIVGNGYVNLLKMIAMPLVFI
SILAAIARLEKASMIGSMSFWIISTLIITTGIAAFDGAIIANLFHLDASSIVAGEQEIARSQSIIESSSQVADLTIPGLI
LSFIPTSIGGTLAGLESTSMISAVVIASLLGIAALTVNKNDPEKGAMIIKGIDIAQSWVMALVRLIIRLTPYGILALMIK
VIVTTDAGAIWQLAKFLIASYVALFIMLIVHALIITLTGRSPISHFKKIAPVLTFAFTSRSSAATIPLSIDAQVNELGIA
KPIANFSASFGSTIGQNGCAGVYPAMLAMMIAPTMGIDPWSMSFIASVVGISMIASFGVAGVGGGATFAAIIVLSTLGMP
LELAGLLISIEPLIDMMRTLVNVSGSITAGVVGNKVLGDVAHHADYQGQPS

Sequences:

>Translated_451_residues
MLVFVLLILFVGLLYGLWRYHRQSDSLSRSVFLGLFLGVIYGLVISSLGLDTESFLPWVNIVGNGYVNLLKMIAMPLVFI
SILAAIARLEKASMIGSMSFWIISTLIITTGIAAFDGAIIANLFHLDASSIVAGEQEIARSQSIIESSSQVADLTIPGLI
LSFIPTSIGGTLAGLESTSMISAVVIASLLGIAALTVNKNDPEKGAMIIKGIDIAQSWVMALVRLIIRLTPYGILALMIK
VIVTTDAGAIWQLAKFLIASYVALFIMLIVHALIITLTGRSPISHFKKIAPVLTFAFTSRSSAATIPLSIDAQVNELGIA
KPIANFSASFGSTIGQNGCAGVYPAMLAMMIAPTMGIDPWSMSFIASVVGISMIASFGVAGVGGGATFAAIIVLSTLGMP
LELAGLLISIEPLIDMMRTLVNVSGSITAGVVGNKVLGDVAHHADYQGQPS
>Mature_451_residues
MLVFVLLILFVGLLYGLWRYHRQSDSLSRSVFLGLFLGVIYGLVISSLGLDTESFLPWVNIVGNGYVNLLKMIAMPLVFI
SILAAIARLEKASMIGSMSFWIISTLIITTGIAAFDGAIIANLFHLDASSIVAGEQEIARSQSIIESSSQVADLTIPGLI
LSFIPTSIGGTLAGLESTSMISAVVIASLLGIAALTVNKNDPEKGAMIIKGIDIAQSWVMALVRLIIRLTPYGILALMIK
VIVTTDAGAIWQLAKFLIASYVALFIMLIVHALIITLTGRSPISHFKKIAPVLTFAFTSRSSAATIPLSIDAQVNELGIA
KPIANFSASFGSTIGQNGCAGVYPAMLAMMIAPTMGIDPWSMSFIASVVGISMIASFGVAGVGGGATFAAIIVLSTLGMP
LELAGLLISIEPLIDMMRTLVNVSGSITAGVVGNKVLGDVAHHADYQGQPS

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI169790839, Length=327, Percent_Identity=26.605504587156, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI223468566, Length=269, Percent_Identity=26.3940520446097, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI5032093, Length=393, Percent_Identity=25.1908396946565, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI223468564, Length=265, Percent_Identity=26.4150943396226, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI4827012, Length=235, Percent_Identity=30.6382978723404, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI194239697, Length=251, Percent_Identity=27.0916334661355, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI66773030, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI40254478, Length=239, Percent_Identity=29.2887029288703, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1788024, Length=456, Percent_Identity=50.8771929824561, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1790514, Length=411, Percent_Identity=26.5206812652068, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1789947, Length=430, Percent_Identity=24.6511627906977, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193206505, Length=463, Percent_Identity=23.3261339092873, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193206654, Length=463, Percent_Identity=23.110151187905, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71983106, Length=451, Percent_Identity=21.9512195121951, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71983099, Length=451, Percent_Identity=21.9512195121951, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71996953, Length=482, Percent_Identity=24.6887966804979, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17541374, Length=413, Percent_Identity=24.455205811138, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17537407, Length=426, Percent_Identity=23.7089201877934, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24583025, Length=440, Percent_Identity=25.4545454545455, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI17137668, Length=440, Percent_Identity=25.4545454545455, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24583023, Length=440, Percent_Identity=25.4545454545455, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 47360; Mature: 47360

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVFVLLILFVGLLYGLWRYHRQSDSLSRSVFLGLFLGVIYGLVISSLGLDTESFLPWVN
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHH
IVGNGYVNLLKMIAMPLVFISILAAIARLEKASMIGSMSFWIISTLIITTGIAAFDGAII
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLFHLDASSIVAGEQEIARSQSIIESSSQVADLTIPGLILSFIPTSIGGTLAGLESTSM
HHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
ISAVVIASLLGIAALTVNKNDPEKGAMIIKGIDIAQSWVMALVRLIIRLTPYGILALMIK
HHHHHHHHHHHHHHEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VIVTTDAGAIWQLAKFLIASYVALFIMLIVHALIITLTGRSPISHFKKIAPVLTFAFTSR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
SSAATIPLSIDAQVNELGIAKPIANFSASFGSTIGQNGCAGVYPAMLAMMIAPTMGIDPW
CCCEEEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
SMSFIASVVGISMIASFGVAGVGGGATFAAIIVLSTLGMPLELAGLLISIEPLIDMMRTL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VNVSGSITAGVVGNKVLGDVAHHADYQGQPS
HCCCCCEEHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVFVLLILFVGLLYGLWRYHRQSDSLSRSVFLGLFLGVIYGLVISSLGLDTESFLPWVN
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHH
IVGNGYVNLLKMIAMPLVFISILAAIARLEKASMIGSMSFWIISTLIITTGIAAFDGAII
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLFHLDASSIVAGEQEIARSQSIIESSSQVADLTIPGLILSFIPTSIGGTLAGLESTSM
HHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
ISAVVIASLLGIAALTVNKNDPEKGAMIIKGIDIAQSWVMALVRLIIRLTPYGILALMIK
HHHHHHHHHHHHHHEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VIVTTDAGAIWQLAKFLIASYVALFIMLIVHALIITLTGRSPISHFKKIAPVLTFAFTSR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
SSAATIPLSIDAQVNELGIAKPIANFSASFGSTIGQNGCAGVYPAMLAMMIAPTMGIDPW
CCCEEEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
SMSFIASVVGISMIASFGVAGVGGGATFAAIIVLSTLGMPLELAGLLISIEPLIDMMRTL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VNVSGSITAGVVGNKVLGDVAHHADYQGQPS
HCCCCCEEHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]