| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is nadR [H]
Identifier: 148653261
GI number: 148653261
Start: 1789761
End: 1790345
Strand: Direct
Name: nadR [H]
Synonym: PsycPRwf_1459
Alternate gene names: 148653261
Gene position: 1789761-1790345 (Clockwise)
Preceding gene: 148653253
Following gene: 148653263
Centisome position: 60.08
GC content: 48.38
Gene sequence:
>585_bases ATGCCTATTAAGGTATCACAAGCTCATTTAGAAGCCGAGTTACAGCAGCACACGCCAGCCGGTATTAAAAAGGTGCTTAT CCTTGGTGCCGAAAGTACTGGCAAAACGACCCTATGCCAAGATTTGGCTCAGCATTATCAGACTCAGTGGGTAATTGAGT ACATGCGCCCCTATTTGCAGCACAAATGGGACACCACTCAAAGCGTTTGTGAATGGCAGGATTTAATGCCGATTGCCTAT GGGCAAGTTGCGACCGAAAATCAGCAGGCAGCGGTGGCCAATCGCTATCTGTTTTGTGATACCGCTTTATTTGAGATTAT GGTGTATGCGTATTGGTATTATAATGAGTGTCCAGCCGCGCTTAAGGCTGCAGCACTGAGCCATCATTACGACTTGATCT TGCTAACGCAGGTGGATGTGCCTTGGGTGGCTGATGACTTACGTGACGCGCCCCAGCAGCGAGAGCAGATTACCCAAGCG TTTATCGATGCTTTAACTGAGCACAATAAGCCATTTTTACGCATTGGTGGGACACGTCAAGCACGGGTACAGCAAGTTAC CCAGTGGCTTGACGCTGGTTTATGA
Upstream 100 bases:
>100_bases TATCTTTTTCTATCTCAGCTTATTTATGGCGCAATTGATAACTATAAATTGCTATTGTTCAGTGTACAAGCGTTTATTAA TATAAAAAGGTTATTTTAAA
Downstream 100 bases:
>100_bases TAAGACAGCTTTTGGATAAGCTGCGACTATACCTTAATTTTCTGTAATACAAAGTCAATGTCTTTATCACCTCGACCGGA CAAGTTGACCAAGATGCTCT
Product: NAD metabolism ATPase/kinase-like protein
Products: NA
Alternate protein names: Transcriptional regulator NadR; Nicotinamide mononucleotide adenylyltransferase; NMN adenylyltransferase; NMN-AT; NMNAT; Nicotinamide ribonucleotide adenylyltransferase; Nicotinamide-nucleotide adenylyltransferase; Ribosylnicotinamide kinase; RNK; Nicotinamide riboside kinase; NRK; NmR-K [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPIKVSQAHLEAELQQHTPAGIKKVLILGAESTGKTTLCQDLAQHYQTQWVIEYMRPYLQHKWDTTQSVCEWQDLMPIAY GQVATENQQAAVANRYLFCDTALFEIMVYAYWYYNECPAALKAAALSHHYDLILLTQVDVPWVADDLRDAPQQREQITQA FIDALTEHNKPFLRIGGTRQARVQQVTQWLDAGL
Sequences:
>Translated_194_residues MPIKVSQAHLEAELQQHTPAGIKKVLILGAESTGKTTLCQDLAQHYQTQWVIEYMRPYLQHKWDTTQSVCEWQDLMPIAY GQVATENQQAAVANRYLFCDTALFEIMVYAYWYYNECPAALKAAALSHHYDLILLTQVDVPWVADDLRDAPQQREQITQA FIDALTEHNKPFLRIGGTRQARVQQVTQWLDAGL >Mature_193_residues PIKVSQAHLEAELQQHTPAGIKKVLILGAESTGKTTLCQDLAQHYQTQWVIEYMRPYLQHKWDTTQSVCEWQDLMPIAYG QVATENQQAAVANRYLFCDTALFEIMVYAYWYYNECPAALKAAALSHHYDLILLTQVDVPWVADDLRDAPQQREQITQAF IDALTEHNKPFLRIGGTRQARVQQVTQWLDAGL
Specific function: This enzyme has three activities:DNA binding, nicotinamide mononucleotide (NMN) adenylyltransferase and ribosylnicotinamide (RN) kinase. The DNA-binding domain binds to the nadB operator sequence in an NAD- and ATP-dependent manner. As NAD levels increase
COG id: COG3172
COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein. Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082440, Length=159, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016429 - InterPro: IPR004821 - InterPro: IPR001387 - InterPro: IPR010982 - InterPro: IPR006417 - InterPro: IPR014729 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: =2.7.7.1; =2.7.1.22 [H]
Molecular weight: Translated: 22236; Mature: 22104
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKVSQAHLEAELQQHTPAGIKKVLILGAESTGKTTLCQDLAQHYQTQWVIEYMRPYLQ CCCCCHHHHHHHHHHHCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HKWDTTQSVCEWQDLMPIAYGQVATENQQAAVANRYLFCDTALFEIMVYAYWYYNECPAA HCCCCHHHHHHHHHCCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKAAALSHHYDLILLTQVDVPWVADDLRDAPQQREQITQAFIDALTEHNKPFLRIGGTRQ HHHHHHHCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHH ARVQQVTQWLDAGL HHHHHHHHHHHCCC >Mature Secondary Structure PIKVSQAHLEAELQQHTPAGIKKVLILGAESTGKTTLCQDLAQHYQTQWVIEYMRPYLQ CCCCHHHHHHHHHHHCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HKWDTTQSVCEWQDLMPIAYGQVATENQQAAVANRYLFCDTALFEIMVYAYWYYNECPAA HCCCCHHHHHHHHHCCHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKAAALSHHYDLILLTQVDVPWVADDLRDAPQQREQITQAFIDALTEHNKPFLRIGGTRQ HHHHHHHCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHH ARVQQVTQWLDAGL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 1327967 [H]