| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653187
Identifier: 148653187
GI number: 148653187
Start: 1698648
End: 1699907
Strand: Direct
Name: 148653187
Synonym: PsycPRwf_1385
Alternate gene names: NA
Gene position: 1698648-1699907 (Clockwise)
Preceding gene: 148653186
Following gene: 148653192
Centisome position: 57.02
GC content: 46.27
Gene sequence:
>1260_bases ATGCTTGAAAACTACAATCAGTTTCTTCTAGTGTGTGGCATCGCCTTTTTGTTTGGTGCCCTATCCCCTGTTTTTTTAAA ACGTCTGCCCTTATCTTTGCCGATGCTACAGGTAAGCTTTGGCTTACTCATGGGTTATTTTTGGTCTGCGCTCCCCTTTT TAAATCCTATCGCCAATGGTGAGGTGGTCGAAAAGGTATGTGAGCTTGTGGTACTGGTATCCTTAGTTGGTGCCGGTATA AAGATTGATACCCCGCTTAGCTATAAGCATTGGCGGCCCACCTTTCGGCTATTGCTCATCACCATGCCTTTATGTATCGC GGCAATGGCAGCGCTTGGCTATTATATTTTTGGCTTGAGCTTGGCGGCAGCTATCTTACTGGGTTCTATTTTGGCGCCGA CAGACCCGGTATTGGCCTCTAGCATTCAAGTAGGCCCGCCTAACTCTGGTAATGAGGACACCCCGCGCTTTACCCTTACC TCTGAGGCGGGACTCAATGATGGTCTGGCCTTTCCTTTTGTCTATCTGGCAATAAAAATTGCGGAGTATTACGGTAAGGC AAATGAGCTGTCCTTGTCTCTTTTAGTCGACTGGCTTAGTGTAGATGTGCTCTGGAAAGTCGGTGCTGGTGTCGCCGTTG GTGTCTTGGTTGGTAAGCTGCTTAGCAAGCTGATTTTCTCAAAAAGCAATAAAGACACTGTTATGTCGCAAGGCTATGTG GTCATTGCGATGACGTTATTGGCTTATGGTGTGGCAGAATTTGTGCATGCCTACGGCTTTATCTCTGTGTTTATTGCCGC TTTCACCTTCCGTCACAGCGAGCACACTCATGATTATCATACCGCATTACATGACTTCTCTGAACAATCAGAGGGGCTGC TTATGTCCTTGGTATTGGTGGTATTTGGGATGGCGTTGGGTCAAGGTTTAAGCTCAGATGTAAGCTTAAGCTGGCAAGTA TATGCCACAAGCCTACTGTTCTTGTTCGTGGTAAGACCGGCTGCTGGGTGGATAGGACTGGCAGGGCTTAATTTGCCTAA TAAGGAGCGCTTTGTCATCTCAAGCTTAGGCATCCGCGGTATCGGATCTTTTTATTACTTAGCCTATGCTCTAAATCAAG ACGTCTTTGCACTCGATGATGCCACAGACTTATGGATTATCTGTAGCATCGTCATTATTGTCTCTATATTTTTGCACGGC ATGGTGGCACCTAGACTTATTGATGACGCTAAACCTAGCAGCACTAATAAACCTGCTTAA
Upstream 100 bases:
>100_bases TGCTGGGCAGATACGCCATTATTAATCTCTGTTACTGACCAATACTAAGCCCTACTATTGACAGTGTTTTTTCTTCTTAA CTCAAATTATCGATACTCTG
Downstream 100 bases:
>100_bases CGGTAAAGGCATCTCGCCAAGCGGCCCACCTCTAGCAGATCTTGTAAAATCGCCAAGTAAATTAAACCTGACTGGTTTTA TTTTCAGGTTTAATTTACGA
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Na+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Cation Transport Related Protein; Na+/H+ Antiporter CPA1 Family Protein; Transporter CPA2 Family; Sodium/Proton Antiporter CPA1 Family; Na(+)/H(+) Antiporter; CPA1 Family Na+/H+ Antiporter; CPA1 Family Na(+)/H(+) Antiporter; Cation Transporter-Like Protein
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLENYNQFLLVCGIAFLFGALSPVFLKRLPLSLPMLQVSFGLLMGYFWSALPFLNPIANGEVVEKVCELVVLVSLVGAGI KIDTPLSYKHWRPTFRLLLITMPLCIAAMAALGYYIFGLSLAAAILLGSILAPTDPVLASSIQVGPPNSGNEDTPRFTLT SEAGLNDGLAFPFVYLAIKIAEYYGKANELSLSLLVDWLSVDVLWKVGAGVAVGVLVGKLLSKLIFSKSNKDTVMSQGYV VIAMTLLAYGVAEFVHAYGFISVFIAAFTFRHSEHTHDYHTALHDFSEQSEGLLMSLVLVVFGMALGQGLSSDVSLSWQV YATSLLFLFVVRPAAGWIGLAGLNLPNKERFVISSLGIRGIGSFYYLAYALNQDVFALDDATDLWIICSIVIIVSIFLHG MVAPRLIDDAKPSSTNKPA
Sequences:
>Translated_419_residues MLENYNQFLLVCGIAFLFGALSPVFLKRLPLSLPMLQVSFGLLMGYFWSALPFLNPIANGEVVEKVCELVVLVSLVGAGI KIDTPLSYKHWRPTFRLLLITMPLCIAAMAALGYYIFGLSLAAAILLGSILAPTDPVLASSIQVGPPNSGNEDTPRFTLT SEAGLNDGLAFPFVYLAIKIAEYYGKANELSLSLLVDWLSVDVLWKVGAGVAVGVLVGKLLSKLIFSKSNKDTVMSQGYV VIAMTLLAYGVAEFVHAYGFISVFIAAFTFRHSEHTHDYHTALHDFSEQSEGLLMSLVLVVFGMALGQGLSSDVSLSWQV YATSLLFLFVVRPAAGWIGLAGLNLPNKERFVISSLGIRGIGSFYYLAYALNQDVFALDDATDLWIICSIVIIVSIFLHG MVAPRLIDDAKPSSTNKPA >Mature_419_residues MLENYNQFLLVCGIAFLFGALSPVFLKRLPLSLPMLQVSFGLLMGYFWSALPFLNPIANGEVVEKVCELVVLVSLVGAGI KIDTPLSYKHWRPTFRLLLITMPLCIAAMAALGYYIFGLSLAAAILLGSILAPTDPVLASSIQVGPPNSGNEDTPRFTLT SEAGLNDGLAFPFVYLAIKIAEYYGKANELSLSLLVDWLSVDVLWKVGAGVAVGVLVGKLLSKLIFSKSNKDTVMSQGYV VIAMTLLAYGVAEFVHAYGFISVFIAAFTFRHSEHTHDYHTALHDFSEQSEGLLMSLVLVVFGMALGQGLSSDVSLSWQV YATSLLFLFVVRPAAGWIGLAGLNLPNKERFVISSLGIRGIGSFYYLAYALNQDVFALDDATDLWIICSIVIIVSIFLHG MVAPRLIDDAKPSSTNKPA
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323167, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45422; Mature: 45422
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENYNQFLLVCGIAFLFGALSPVFLKRLPLSLPMLQVSFGLLMGYFWSALPFLNPIANG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EVVEKVCELVVLVSLVGAGIKIDTPLSYKHWRPTFRLLLITMPLCIAAMAALGYYIFGLS HHHHHHHHHHHHHHHHCCCCEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAAILLGSILAPTDPVLASSIQVGPPNSGNEDTPRFTLTSEAGLNDGLAFPFVYLAIKI HHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AEYYGKANELSLSLLVDWLSVDVLWKVGAGVAVGVLVGKLLSKLIFSKSNKDTVMSQGYV HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHH VIAMTLLAYGVAEFVHAYGFISVFIAAFTFRHSEHTHDYHTALHDFSEQSEGLLMSLVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHH VFGMALGQGLSSDVSLSWQVYATSLLFLFVVRPAAGWIGLAGLNLPNKERFVISSLGIRG HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHHCCCHH IGSFYYLAYALNQDVFALDDATDLWIICSIVIIVSIFLHGMVAPRLIDDAKPSSTNKPA HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLENYNQFLLVCGIAFLFGALSPVFLKRLPLSLPMLQVSFGLLMGYFWSALPFLNPIANG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC EVVEKVCELVVLVSLVGAGIKIDTPLSYKHWRPTFRLLLITMPLCIAAMAALGYYIFGLS HHHHHHHHHHHHHHHHCCCCEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAAILLGSILAPTDPVLASSIQVGPPNSGNEDTPRFTLTSEAGLNDGLAFPFVYLAIKI HHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AEYYGKANELSLSLLVDWLSVDVLWKVGAGVAVGVLVGKLLSKLIFSKSNKDTVMSQGYV HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHH VIAMTLLAYGVAEFVHAYGFISVFIAAFTFRHSEHTHDYHTALHDFSEQSEGLLMSLVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHH VFGMALGQGLSSDVSLSWQVYATSLLFLFVVRPAAGWIGLAGLNLPNKERFVISSLGIRG HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHHCCCHH IGSFYYLAYALNQDVFALDDATDLWIICSIVIIVSIFLHGMVAPRLIDDAKPSSTNKPA HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA