| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is glxK [H]
Identifier: 148653174
GI number: 148653174
Start: 1682223
End: 1683416
Strand: Direct
Name: glxK [H]
Synonym: PsycPRwf_1372
Alternate gene names: 148653174
Gene position: 1682223-1683416 (Clockwise)
Preceding gene: 148653173
Following gene: 148653175
Centisome position: 56.47
GC content: 48.99
Gene sequence:
>1194_bases ATGAATATTTTAATTGCCCCTGACTCATTCAAAGAAAGCTTAGACGCCATTGGTGTGTGCCGTGCTATTCAAGAAGGGTT TAGCCAAGTTTATCCTGAAGCCAATTACACCCTATTGCCTTTAGCCGATGGCGGCGAAGGCACCTCTGAAGTATTGTCTT ATGTACTCGATGGACAGTGGCGAGAGATTGACGTGCATGATCCGTTAATGCGCGCCATTACCGCCAAATACTTGCTCACC GCTGATGCCACTGCCGTTATCGAGATCGCTGAAGCTTGCGGACTGCATTTATTGGCAGATCATGAGCGAAATCCACTCAT CGCCAGCAGTTATGGCGTGGGAGAAATGATCCTCGATGCCATTAACCAAGGGGCAAAGCAGATCTTAATTGGACTTGGCG GCAGTGCGACCAATGATGCTGGCACAGGTATGCTACAGGCTTTGGGCGTTAAGATCTTAGATGCGTCTGGCAAGCTGTTG CCGCCAGGGGGTGCCAGCCTTATTCATACTCACAGTATTGACCGTACCGCGCTACATGTATTGTCTGATATCAAGATTAC TGTCGCCTGCGATGTGACCAGCCCGCTATGTGGCTCTACGGGTGCCAGTCATGTCTTTGCACCACAAAAAGGCGCTACCC CTGAGCAAGTGCTAAGCTTAGATCAAGCTTTATCGCATTTTGCTGATGTGTGTCAAACCCAGAGCATCTGCGCCGATAGC TGCCGTGTCTCTGCAGGCGCAGGTGCAGCAGGTGGACTTGGCTTTGGGCTAATGGCTTTTTGTGCCGCTGAATTAAAATC CGGCTTTGATACCATTGCTGATGCGGTGGCTCTAGACAAGCACTTGACCACAGCAAACTTAGCCATTACCGGTGAGGGTA AGCTTGACTCACAGACTGCTATGGGTAAGGTGGCCAGTGGCGTGGCCAGACAAGCTCGAGCACATAATGTACCGGTAATG GCAATTTGTGGTAGTGTGGATCGTCATTATTCGTTACACTCAAAGCCGAGTGCCAGCGTTTGTGCTGACTCTAATGCCAA AGCATTTGCCATGTTACCTTTTGATGTGGTTGTGCCCAGTATTCAAAAACTAGACAGCTTAGATAAAGTCATGGCTGAAG CGTATTCTAATGTGGCACATACCGCTTATCAGTTAGCGGTTACTTTAAAAATTGGCCAACAGCTCAACCTATAG
Upstream 100 bases:
>100_bases TGGTGTTTTTATAATTATTTTATAGTCTGGTAATCCATAAAAGCGTCATCGACATGACCAAGTTTTATTATCTATTTGTC TTTTGAGTACCCCACTGCCC
Downstream 100 bases:
>100_bases TTTGGTTAACTTTAATGAGAGTTTAATGAGCTTTTAATAAACTTTGCCATTATGTCATATCGCGCCAGCATGACCGCATC AAGCCACTCATGGAAGAGAG
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNILIAPDSFKESLDAIGVCRAIQEGFSQVYPEANYTLLPLADGGEGTSEVLSYVLDGQWREIDVHDPLMRAITAKYLLT ADATAVIEIAEACGLHLLADHERNPLIASSYGVGEMILDAINQGAKQILIGLGGSATNDAGTGMLQALGVKILDASGKLL PPGGASLIHTHSIDRTALHVLSDIKITVACDVTSPLCGSTGASHVFAPQKGATPEQVLSLDQALSHFADVCQTQSICADS CRVSAGAGAAGGLGFGLMAFCAAELKSGFDTIADAVALDKHLTTANLAITGEGKLDSQTAMGKVASGVARQARAHNVPVM AICGSVDRHYSLHSKPSASVCADSNAKAFAMLPFDVVVPSIQKLDSLDKVMAEAYSNVAHTAYQLAVTLKIGQQLNL
Sequences:
>Translated_397_residues MNILIAPDSFKESLDAIGVCRAIQEGFSQVYPEANYTLLPLADGGEGTSEVLSYVLDGQWREIDVHDPLMRAITAKYLLT ADATAVIEIAEACGLHLLADHERNPLIASSYGVGEMILDAINQGAKQILIGLGGSATNDAGTGMLQALGVKILDASGKLL PPGGASLIHTHSIDRTALHVLSDIKITVACDVTSPLCGSTGASHVFAPQKGATPEQVLSLDQALSHFADVCQTQSICADS CRVSAGAGAAGGLGFGLMAFCAAELKSGFDTIADAVALDKHLTTANLAITGEGKLDSQTAMGKVASGVARQARAHNVPVM AICGSVDRHYSLHSKPSASVCADSNAKAFAMLPFDVVVPSIQKLDSLDKVMAEAYSNVAHTAYQLAVTLKIGQQLNL >Mature_397_residues MNILIAPDSFKESLDAIGVCRAIQEGFSQVYPEANYTLLPLADGGEGTSEVLSYVLDGQWREIDVHDPLMRAITAKYLLT ADATAVIEIAEACGLHLLADHERNPLIASSYGVGEMILDAINQGAKQILIGLGGSATNDAGTGMLQALGVKILDASGKLL PPGGASLIHTHSIDRTALHVLSDIKITVACDVTSPLCGSTGASHVFAPQKGATPEQVLSLDQALSHFADVCQTQSICADS CRVSAGAGAAGGLGFGLMAFCAAELKSGFDTIADAVALDKHLTTANLAITGEGKLDSQTAMGKVASGVARQARAHNVPVM AICGSVDRHYSLHSKPSASVCADSNAKAFAMLPFDVVVPSIQKLDSLDKVMAEAYSNVAHTAYQLAVTLKIGQQLNL
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=399, Percent_Identity=42.3558897243108, Blast_Score=271, Evalue=5e-74, Organism=Escherichia coli, GI145693185, Length=396, Percent_Identity=42.4242424242424, Blast_Score=269, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 41193; Mature: 41193
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIAPDSFKESLDAIGVCRAIQEGFSQVYPEANYTLLPLADGGEGTSEVLSYVLDGQW CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCC REIDVHDPLMRAITAKYLLTADATAVIEIAEACGLHLLADHERNPLIASSYGVGEMILDA EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCHHHHHHHH INQGAKQILIGLGGSATNDAGTGMLQALGVKILDASGKLLPPGGASLIHTHSIDRTALHV HHCCCCEEEEECCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCEEEECCCHHHHHHH LSDIKITVACDVTSPLCGSTGASHVFAPQKGATPEQVLSLDQALSHFADVCQTQSICADS HHCCEEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CRVSAGAGAAGGLGFGLMAFCAAELKSGFDTIADAVALDKHLTTANLAITGEGKLDSQTA CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH MGKVASGVARQARAHNVPVMAICGSVDRHYSLHSKPSASVCADSNAKAFAMLPFDVVVPS HHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCEECCCCCCEEEECCHHHHHHH IQKLDSLDKVMAEAYSNVAHTAYQLAVTLKIGQQLNL HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure MNILIAPDSFKESLDAIGVCRAIQEGFSQVYPEANYTLLPLADGGEGTSEVLSYVLDGQW CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCC REIDVHDPLMRAITAKYLLTADATAVIEIAEACGLHLLADHERNPLIASSYGVGEMILDA EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCHHHHHHHH INQGAKQILIGLGGSATNDAGTGMLQALGVKILDASGKLLPPGGASLIHTHSIDRTALHV HHCCCCEEEEECCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCEEEECCCHHHHHHH LSDIKITVACDVTSPLCGSTGASHVFAPQKGATPEQVLSLDQALSHFADVCQTQSICADS HHCCEEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CRVSAGAGAAGGLGFGLMAFCAAELKSGFDTIADAVALDKHLTTANLAITGEGKLDSQTA CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH MGKVASGVARQARAHNVPVMAICGSVDRHYSLHSKPSASVCADSNAKAFAMLPFDVVVPS HHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCEECCCCCCEEEECCHHHHHHH IQKLDSLDKVMAEAYSNVAHTAYQLAVTLKIGQQLNL HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]