| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653150
Identifier: 148653150
GI number: 148653150
Start: 1644347
End: 1645168
Strand: Direct
Name: 148653150
Synonym: PsycPRwf_1348
Alternate gene names: NA
Gene position: 1644347-1645168 (Clockwise)
Preceding gene: 148653149
Following gene: 148653151
Centisome position: 55.2
GC content: 39.17
Gene sequence:
>822_bases ATGCTAATACAAACAAATTTATCAGCTGTTAAAGCCAATCAAGGTACACCGGTGGATGTGGTCGAAGAATGGTTAAAAGA GAATGGGAGAGTCGAATCGCTCCCTGATAATTTAGTGAAAGGTGATTCTTATTTTAATAATGTAAACACCAAGGAGATTC AAAAGAGACAAATTAAAAACAAACAACGTGCACGTGATTTGCATGAGGCAATCGTTAGTGTGGCTGGCAATCTACCAAAG AGCAAGGCTCGTGAGATTGATTTTTCAGACGAGCATTACACTAACTTGGTTAGCCAGGTTAAAAGTAGATTTTTTAATGG GGAATTAGTTAAAGCAACTGATTATAAAGGCGTTTATGCAATATCAACAATGAGTTGCATCCTATCGTGGATAGCCGCAG ATTTAAGATCAAAAGGCTTTGAGATCGTTACTCTAAAAACTGAAGCCAAACGAAACCTTGGTTGGATTACTGAAAGCGCG TTAAATGAAAGGCTTTTGACTAAAAAGAATGCTGAAGCTGTTCGCAAACGTCTAGAGCCAATCAATGACTTATCTAGCCA GCAGATCTATCACCAAACGATTGCAGAGATTGCACAAAGAATATTAGCAGGCCAATTTGTAAGAGTTGAAGAATACACTG CTAGGCATTCAAGAGTTGTTACCCTAAGAATGGTTGCACTGGCTCTCAAAAAATCAAACATAGTAAATGATGTGGTATCT GTTAACTATGAGCGCGGAAGAAAAGCTGGTTGGGTGCTCGAATCTGAGGTGCATAAAAAGCTCACCAAGGTAAATGACTG CCCTCAAACTGAGGAGGCATAA
Upstream 100 bases:
>100_bases GCTAGATATGGTTGCTGAAGAAATTGGTGCTGAGGGTTAAAAGACTAACGATAGCATTGGCTTTGCTGATGCTATCTATC ATCTAGGGTTGGAGAAAATA
Downstream 100 bases:
>100_bases ATGGACTTATTAACCAACCGTCGATTTGCTAATGCATCTGAATTTGAATTGATAGCACTCGCATTAGATGAAGGTTATGA CTCACTAGCATATGCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLIQTNLSAVKANQGTPVDVVEEWLKENGRVESLPDNLVKGDSYFNNVNTKEIQKRQIKNKQRARDLHEAIVSVAGNLPK SKAREIDFSDEHYTNLVSQVKSRFFNGELVKATDYKGVYAISTMSCILSWIAADLRSKGFEIVTLKTEAKRNLGWITESA LNERLLTKKNAEAVRKRLEPINDLSSQQIYHQTIAEIAQRILAGQFVRVEEYTARHSRVVTLRMVALALKKSNIVNDVVS VNYERGRKAGWVLESEVHKKLTKVNDCPQTEEA
Sequences:
>Translated_273_residues MLIQTNLSAVKANQGTPVDVVEEWLKENGRVESLPDNLVKGDSYFNNVNTKEIQKRQIKNKQRARDLHEAIVSVAGNLPK SKAREIDFSDEHYTNLVSQVKSRFFNGELVKATDYKGVYAISTMSCILSWIAADLRSKGFEIVTLKTEAKRNLGWITESA LNERLLTKKNAEAVRKRLEPINDLSSQQIYHQTIAEIAQRILAGQFVRVEEYTARHSRVVTLRMVALALKKSNIVNDVVS VNYERGRKAGWVLESEVHKKLTKVNDCPQTEEA >Mature_273_residues MLIQTNLSAVKANQGTPVDVVEEWLKENGRVESLPDNLVKGDSYFNNVNTKEIQKRQIKNKQRARDLHEAIVSVAGNLPK SKAREIDFSDEHYTNLVSQVKSRFFNGELVKATDYKGVYAISTMSCILSWIAADLRSKGFEIVTLKTEAKRNLGWITESA LNERLLTKKNAEAVRKRLEPINDLSSQQIYHQTIAEIAQRILAGQFVRVEEYTARHSRVVTLRMVALALKKSNIVNDVVS VNYERGRKAGWVLESEVHKKLTKVNDCPQTEEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30954; Mature: 30954
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQTNLSAVKANQGTPVDVVEEWLKENGRVESLPDNLVKGDSYFNNVNTKEIQKRQIKN CEEECCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHH KQRARDLHEAIVSVAGNLPKSKAREIDFSDEHYTNLVSQVKSRFFNGELVKATDYKGVYA HHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH ISTMSCILSWIAADLRSKGFEIVTLKTEAKRNLGWITESALNERLLTKKNAEAVRKRLEP HHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCH INDLSSQQIYHQTIAEIAQRILAGQFVRVEEYTARHSRVVTLRMVALALKKSNIVNDVVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNYERGRKAGWVLESEVHKKLTKVNDCPQTEEA CCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLIQTNLSAVKANQGTPVDVVEEWLKENGRVESLPDNLVKGDSYFNNVNTKEIQKRQIKN CEEECCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHH KQRARDLHEAIVSVAGNLPKSKAREIDFSDEHYTNLVSQVKSRFFNGELVKATDYKGVYA HHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH ISTMSCILSWIAADLRSKGFEIVTLKTEAKRNLGWITESALNERLLTKKNAEAVRKRLEP HHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCH INDLSSQQIYHQTIAEIAQRILAGQFVRVEEYTARHSRVVTLRMVALALKKSNIVNDVVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNYERGRKAGWVLESEVHKKLTKVNDCPQTEEA CCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA