Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148653149

Identifier: 148653149

GI number: 148653149

Start: 1643318

End: 1644286

Strand: Direct

Name: 148653149

Synonym: PsycPRwf_1347

Alternate gene names: NA

Gene position: 1643318-1644286 (Clockwise)

Preceding gene: 148653148

Following gene: 148653150

Centisome position: 55.16

GC content: 44.38

Gene sequence:

>969_bases
ATGAATAACTTACCTCAACAAACACAACCATCTGGTTTTATCAATCCTCAAAACTATCAAGAAGCCTGGCAGTTTAGCGA
AATGTTAGCAGCATCTGAGATGGTGCCCAAGAACTTCAAAGGTAAACCGGCTGATATTTTAATCGCCATGCAAATGGGTA
GCGAGATTGGCTTAAAACCCCTGCAATCACTGCAAAATATCGCTGTAGTTAATGGCCGTCCTACCATCTGGGGTGACGCG
GTTGTAGCTATCTGCCAAAGCTCAGGGATGCTTGAAGATATTACTGAAGAAGTCACCGATGAATATGCAACGGTCACTGT
TAAGCGAATTGGCCAAGAGCCACACAGCGTAACTTTTAGTATGCAAGACGCTAAAAAAGCAGGGTTGGCTGGTAAACAAG
GTCCTTGGACTCAGTACCCCAAGCGCATGATGAAAAACCGCGCACGTGCTTACGCTCTACGTGACAAGTTCGCTGACGTG
CTAAGTGGCTTTGGGATCACTGAAGAAGAGAAAGACCGTGTGATTGACGTTACTCCAGCCAAGCCGGGTAAGACCAAAAA
CGCCGGTGCCTCTGCCCTACTTGAGCGTGTCAAAGCAAAGGCGGCAACAGTTGAAGCACCGGCTATTGAGTATTTTGATA
CCACCCAATTAATTAACTTCATTGCCCAAGCTGAAAACTTAGAGCAAATTAATGGTATCGGCAAAGAAATTAAAGCCATG
TCTGAAAATGCAGATATCAACATCAAAAATTATGACTTGGCAGCTCTACGTAAAACTTGGAAAGATAAAAAGCTGGAGCT
TGAGTACGCCAATCTTATGAATAACATCAAATCGTGCCAGTCATTAGATGATATTGAGCGTATGCGCGGTGTGATTGAAG
ACAAGTCTGGTGACTTTGCACAGCCTGATTTACAGCTACTTAGCGACACGCTAGATATGGTTGCTGAAGAAATTGGTGCT
GAGGGTTAA

Upstream 100 bases:

>100_bases
ATGGCTAAGGGCGCAAGAATGGTTCTGGGCGATGCAATTACAGAAACCGAATATCAAGAATTAACAAAACTAGAAAGCCA
ATTAAATAAGGAACAAAACA

Downstream 100 bases:

>100_bases
AAGACTAACGATAGCATTGGCTTTGCTGATGCTATCTATCATCTAGGGTTGGAGAAAATAATGCTAATACAAACAAATTT
ATCAGCTGTTAAAGCCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA
VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV
LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM
SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA
EG

Sequences:

>Translated_322_residues
MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA
VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV
LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM
SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA
EG
>Mature_322_residues
MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA
VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV
LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM
SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA
EG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35566; Mature: 35566

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHH
LQSLQNIAVVNGRPTIWGDAVVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFS
HHHHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
MQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADVLSGFGITEEEKDRVIDVTPA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
KPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFA
CCCCCEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
QPDLQLLSDTLDMVAEEIGAEG
CHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHH
LQSLQNIAVVNGRPTIWGDAVVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFS
HHHHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
MQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADVLSGFGITEEEKDRVIDVTPA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
KPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFA
CCCCCEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
QPDLQLLSDTLDMVAEEIGAEG
CHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA