| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653149
Identifier: 148653149
GI number: 148653149
Start: 1643318
End: 1644286
Strand: Direct
Name: 148653149
Synonym: PsycPRwf_1347
Alternate gene names: NA
Gene position: 1643318-1644286 (Clockwise)
Preceding gene: 148653148
Following gene: 148653150
Centisome position: 55.16
GC content: 44.38
Gene sequence:
>969_bases ATGAATAACTTACCTCAACAAACACAACCATCTGGTTTTATCAATCCTCAAAACTATCAAGAAGCCTGGCAGTTTAGCGA AATGTTAGCAGCATCTGAGATGGTGCCCAAGAACTTCAAAGGTAAACCGGCTGATATTTTAATCGCCATGCAAATGGGTA GCGAGATTGGCTTAAAACCCCTGCAATCACTGCAAAATATCGCTGTAGTTAATGGCCGTCCTACCATCTGGGGTGACGCG GTTGTAGCTATCTGCCAAAGCTCAGGGATGCTTGAAGATATTACTGAAGAAGTCACCGATGAATATGCAACGGTCACTGT TAAGCGAATTGGCCAAGAGCCACACAGCGTAACTTTTAGTATGCAAGACGCTAAAAAAGCAGGGTTGGCTGGTAAACAAG GTCCTTGGACTCAGTACCCCAAGCGCATGATGAAAAACCGCGCACGTGCTTACGCTCTACGTGACAAGTTCGCTGACGTG CTAAGTGGCTTTGGGATCACTGAAGAAGAGAAAGACCGTGTGATTGACGTTACTCCAGCCAAGCCGGGTAAGACCAAAAA CGCCGGTGCCTCTGCCCTACTTGAGCGTGTCAAAGCAAAGGCGGCAACAGTTGAAGCACCGGCTATTGAGTATTTTGATA CCACCCAATTAATTAACTTCATTGCCCAAGCTGAAAACTTAGAGCAAATTAATGGTATCGGCAAAGAAATTAAAGCCATG TCTGAAAATGCAGATATCAACATCAAAAATTATGACTTGGCAGCTCTACGTAAAACTTGGAAAGATAAAAAGCTGGAGCT TGAGTACGCCAATCTTATGAATAACATCAAATCGTGCCAGTCATTAGATGATATTGAGCGTATGCGCGGTGTGATTGAAG ACAAGTCTGGTGACTTTGCACAGCCTGATTTACAGCTACTTAGCGACACGCTAGATATGGTTGCTGAAGAAATTGGTGCT GAGGGTTAA
Upstream 100 bases:
>100_bases ATGGCTAAGGGCGCAAGAATGGTTCTGGGCGATGCAATTACAGAAACCGAATATCAAGAATTAACAAAACTAGAAAGCCA ATTAAATAAGGAACAAAACA
Downstream 100 bases:
>100_bases AAGACTAACGATAGCATTGGCTTTGCTGATGCTATCTATCATCTAGGGTTGGAGAAAATAATGCTAATACAAACAAATTT ATCAGCTGTTAAAGCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA EG
Sequences:
>Translated_322_residues MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA EG >Mature_322_residues MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKPLQSLQNIAVVNGRPTIWGDA VVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFSMQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADV LSGFGITEEEKDRVIDVTPAKPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFAQPDLQLLSDTLDMVAEEIGA EG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35566; Mature: 35566
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHH LQSLQNIAVVNGRPTIWGDAVVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFS HHHHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE MQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADVLSGFGITEEEKDRVIDVTPA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC KPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFA CCCCCEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPDLQLLSDTLDMVAEEIGAEG CHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNLPQQTQPSGFINPQNYQEAWQFSEMLAASEMVPKNFKGKPADILIAMQMGSEIGLKP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHH LQSLQNIAVVNGRPTIWGDAVVAICQSSGMLEDITEEVTDEYATVTVKRIGQEPHSVTFS HHHHHHEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE MQDAKKAGLAGKQGPWTQYPKRMMKNRARAYALRDKFADVLSGFGITEEEKDRVIDVTPA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC KPGKTKNAGASALLERVKAKAATVEAPAIEYFDTTQLINFIAQAENLEQINGIGKEIKAM CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SENADINIKNYDLAALRKTWKDKKLELEYANLMNNIKSCQSLDDIERMRGVIEDKSGDFA CCCCCEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPDLQLLSDTLDMVAEEIGAEG CHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA