Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148653146

Identifier: 148653146

GI number: 148653146

Start: 1641286

End: 1641621

Strand: Direct

Name: 148653146

Synonym: PsycPRwf_1344

Alternate gene names: NA

Gene position: 1641286-1641621 (Clockwise)

Preceding gene: 148653145

Following gene: 148653147

Centisome position: 55.1

GC content: 38.99

Gene sequence:

>336_bases
ATGACAGCAACTTTAGAGAAACTCAAGTTAGACACGGGTTATGACTACGAAATTAACGAAGGTTATCGCAAGAAGACTGG
TTTTTTCTTCTTCGAACAAGGCTATGACTTGATTCAAGTTGGCTTCAAATCAGATGAACACGGCAATATCCAAAAACTGG
AAGTTATCGAAGCGTTAAAAGAAGGTGAAGAGCCGATGGACTTTATTATCACTGATGGAATTTATCAAGTTATGCGTGAC
CAAATCGAGCCAATGATATGGGGTGAAGATCCTTATGAAGAGCGCGACAGTATGAGCTCACTTGGTTTCACAAATCCTGA
TTTTTTATACGGTTAA

Upstream 100 bases:

>100_bases
AATGGACAAATGAAGAAGAGCTCGACGATTAACAGGCACAAAAAAGCCCCTCCGACTACCACATCAAAAGGGGCTACTTA
ATCAAATAAGCGAGGACATT

Downstream 100 bases:

>100_bases
GGGGATGGTGATGGAAAAGTTATATCGAGTCAGTTACATCGACCAAGGGACGTACATTACTGAGTACGTCTATGGGGAAA
CAATCATGCAAGCACGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTATLEKLKLDTGYDYEINEGYRKKTGFFFFEQGYDLIQVGFKSDEHGNIQKLEVIEALKEGEEPMDFIITDGIYQVMRD
QIEPMIWGEDPYEERDSMSSLGFTNPDFLYG

Sequences:

>Translated_111_residues
MTATLEKLKLDTGYDYEINEGYRKKTGFFFFEQGYDLIQVGFKSDEHGNIQKLEVIEALKEGEEPMDFIITDGIYQVMRD
QIEPMIWGEDPYEERDSMSSLGFTNPDFLYG
>Mature_110_residues
TATLEKLKLDTGYDYEINEGYRKKTGFFFFEQGYDLIQVGFKSDEHGNIQKLEVIEALKEGEEPMDFIITDGIYQVMRDQ
IEPMIWGEDPYEERDSMSSLGFTNPDFLYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12959; Mature: 12827

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLEKLKLDTGYDYEINEGYRKKTGFFFFEQGYDLIQVGFKSDEHGNIQKLEVIEALK
CCCCCCCEECCCCCCEECCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHH
EGEEPMDFIITDGIYQVMRDQIEPMIWGEDPYEERDSMSSLGFTNPDFLYG
CCCCCCEEEEHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TATLEKLKLDTGYDYEINEGYRKKTGFFFFEQGYDLIQVGFKSDEHGNIQKLEVIEALK
CCCCCCEECCCCCCEECCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHH
EGEEPMDFIITDGIYQVMRDQIEPMIWGEDPYEERDSMSSLGFTNPDFLYG
CCCCCCEEEEHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA