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The map label for this gene is insF1 [C]

Identifier: 148653035

GI number: 148653035

Start: 1511421

End: 1512239

Strand: Direct

Name: insF1 [C]

Synonym: PsycPRwf_1230

Alternate gene names: 148653035

Gene position: 1511421-1512239 (Clockwise)

Preceding gene: 148653034

Following gene: 148653037

Centisome position: 50.74

GC content: 45.05

Gene sequence:

>819_bases
ATGTGCCGCGTGCTAAGGGTTAAGCATTCAAGTTACTACGACTGGCTGAGTCGCGATATCAGCGAGCAGCAGATACATCG
CAACCATTGTGAGCTACTCGTTAAAGCCGCTCACAGTGAAACTCATGAGCGCTATGGTGTTGAGCGTCTGCATGCGCATC
TAAGTGAGCAAGGTCATAACATCAGTCCCTACATGGTCAGAAGCATCAAAGAGGAATACAGCATCAAATGCCGTCGCCAC
AAACGCTTTAAAGTCACCACCGACTCCAATCACAACAAACTGGTCTATCCAAACGTGTTGGATCAAGAGTTTGATGCCAG
TCGCCCTAACCAAGCGTGGGCCAGTGACATCACCTATATTTGGACGCTTGAGGGCTGGTTGTATTTAGCGGGAGTCAAAG
ATTTATATACCAAAGAGCTGGTCGGCTATGCGATCAATAAGCGAATGACCGCAGATCTAGTATGCAAAGCATTGAACATG
GCCATCAAGAATAAACAACCAAGCAAAGGGCTAGTCGTTCACTCTGACAGAGGCAGTCAGTACTGTAGCCATGCTTACCA
CAAGATCATCAAGCAGCATCAGTTTACAGGTTCAATGAGCGGTAAAGGCAACTGCTTTGACAACGCACCCATAGAAAGCT
TCTGGGGCATATTGAAGAACGAGCTAGTATATCACCAAGACTATAAAACAAGGTTTGCAGCTATCAGAGATATCATTGGA
TATATTGAGTTATATTATAATCAGACTAGGATTCAAAAGGGTTTAGGCTATAAATCGCCAAGACAGGTGTGGTTTGATTA
TTATCGTCAGGCTGCGTAA

Upstream 100 bases:

>100_bases
AGCGAGAGATATTAAAAAAGGCGACGGCGTACTTCGCGAAAAACAGCTAGTCAGGTACGCCTTCATCAAAGATAACCAGC
ACTTCTTTACCATCACCACT

Downstream 100 bases:

>100_bases
TCAAAATCTCCCAAGTTTATATATACGGGATTGACGGCAGGGGTCATAATTGTATAATACTAAAATAATCTATGATTACA
ATATTTTATTAGCATTCATA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MCRVLRVKHSSYYDWLSRDISEQQIHRNHCELLVKAAHSETHERYGVERLHAHLSEQGHNISPYMVRSIKEEYSIKCRRH
KRFKVTTDSNHNKLVYPNVLDQEFDASRPNQAWASDITYIWTLEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKQPSKGLVVHSDRGSQYCSHAYHKIIKQHQFTGSMSGKGNCFDNAPIESFWGILKNELVYHQDYKTRFAAIRDIIG
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA

Sequences:

>Translated_272_residues
MCRVLRVKHSSYYDWLSRDISEQQIHRNHCELLVKAAHSETHERYGVERLHAHLSEQGHNISPYMVRSIKEEYSIKCRRH
KRFKVTTDSNHNKLVYPNVLDQEFDASRPNQAWASDITYIWTLEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKQPSKGLVVHSDRGSQYCSHAYHKIIKQHQFTGSMSGKGNCFDNAPIESFWGILKNELVYHQDYKTRFAAIRDIIG
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
>Mature_272_residues
MCRVLRVKHSSYYDWLSRDISEQQIHRNHCELLVKAAHSETHERYGVERLHAHLSEQGHNISPYMVRSIKEEYSIKCRRH
KRFKVTTDSNHNKLVYPNVLDQEFDASRPNQAWASDITYIWTLEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKQPSKGLVVHSDRGSQYCSHAYHKIIKQHQFTGSMSGKGNCFDNAPIESFWGILKNELVYHQDYKTRFAAIRDIIG
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=230, Percent_Identity=30.4347826086957, Blast_Score=122, Evalue=3e-28,
Organism=Escherichia coli, GI1788405, Length=264, Percent_Identity=40.9090909090909, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787263, Length=264, Percent_Identity=40.9090909090909, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1786753, Length=264, Percent_Identity=40.9090909090909, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1786570, Length=264, Percent_Identity=40.9090909090909, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1786490, Length=264, Percent_Identity=40.9090909090909, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1789981, Length=226, Percent_Identity=34.070796460177, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31975; Mature: 31975

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRVLRVKHSSYYDWLSRDISEQQIHRNHCELLVKAAHSETHERYGVERLHAHLSEQGHN
CCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISPYMVRSIKEEYSIKCRRHKRFKVTTDSNHNKLVYPNVLDQEFDASRPNQAWASDITYI
CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHCCCCCCCCCCCHHHCCCEEE
WTLEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNMAIKNKQPSKGLVVHSDRGSQ
EEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCH
YCSHAYHKIIKQHQFTGSMSGKGNCFDNAPIESFWGILKNELVYHQDYKTRFAAIRDIIG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MCRVLRVKHSSYYDWLSRDISEQQIHRNHCELLVKAAHSETHERYGVERLHAHLSEQGHN
CCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISPYMVRSIKEEYSIKCRRHKRFKVTTDSNHNKLVYPNVLDQEFDASRPNQAWASDITYI
CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCHHCCCCCCCCCCCHHHCCCEEE
WTLEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNMAIKNKQPSKGLVVHSDRGSQ
EEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCH
YCSHAYHKIIKQHQFTGSMSGKGNCFDNAPIESFWGILKNELVYHQDYKTRFAAIRDIIG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]