| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is insN1 [C]
Identifier: 148653034
GI number: 148653034
Start: 1511074
End: 1511370
Strand: Direct
Name: insN1 [C]
Synonym: PsycPRwf_1229
Alternate gene names: 148653034
Gene position: 1511074-1511370 (Clockwise)
Preceding gene: 148653026
Following gene: 148653035
Centisome position: 50.72
GC content: 43.43
Gene sequence:
>297_bases ATGGTCAAGAAAATAAGAACCTATAGCACAGAATTTAAAGCTGAAGCCGTTAAGAAGATATCAGACAATAATGGCAATAT CTCAGCAACCGCAAAGCAGCTTGGCATTGCCATGCAAACGCTATCGAATTGGCATAACAAAGCCAACCAAGGCAAGCTCA AAGGCACAGAGCAATACGACCCTGATCTTATGACAGCTCTTCAAGAAATAAAGCAGCTCAAACGACAGCTCAAAGTTGCC GAAGAGGAGCGAGAGATATTAAAAAAGGCGACGGCGTACTTCGCGAAAAACAGCTAG
Upstream 100 bases:
>100_bases TTATAGAATCCCGATGGCTGTGTACGCAATACAACTGAGCTATGCTGAAGAAACCGTACAAGTAAACTTGGTAAACTAAG CATATTAATCGGAGTTTATC
Downstream 100 bases:
>100_bases TCAGGTACGCCTTCATCAAAGATAACCAGCACTTCTTTACCATCACCACTATGTGCCGCGTGCTAAGGGTTAAGCATTCA AGTTACTACGACTGGCTGAG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: ISO-S3 11 kDa protein [H]
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MVKKIRTYSTEFKAEAVKKISDNNGNISATAKQLGIAMQTLSNWHNKANQGKLKGTEQYDPDLMTALQEIKQLKRQLKVA EEEREILKKATAYFAKNS
Sequences:
>Translated_98_residues MVKKIRTYSTEFKAEAVKKISDNNGNISATAKQLGIAMQTLSNWHNKANQGKLKGTEQYDPDLMTALQEIKQLKRQLKVA EEEREILKKATAYFAKNS >Mature_98_residues MVKKIRTYSTEFKAEAVKKISDNNGNISATAKQLGIAMQTLSNWHNKANQGKLKGTEQYDPDLMTALQEIKQLKRQLKVA EEEREILKKATAYFAKNS
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11116; Mature: 11116
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKIRTYSTEFKAEAVKKISDNNGNISATAKQLGIAMQTLSNWHNKANQGKLKGTEQYD CCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PDLMTALQEIKQLKRQLKVAEEEREILKKATAYFAKNS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKKIRTYSTEFKAEAVKKISDNNGNISATAKQLGIAMQTLSNWHNKANQGKLKGTEQYD CCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PDLMTALQEIKQLKRQLKVAEEEREILKKATAYFAKNS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]