| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653009
Identifier: 148653009
GI number: 148653009
Start: 1472582
End: 1473922
Strand: Direct
Name: 148653009
Synonym: PsycPRwf_1203
Alternate gene names: NA
Gene position: 1472582-1473922 (Clockwise)
Preceding gene: 148653008
Following gene: 148653010
Centisome position: 49.43
GC content: 47.05
Gene sequence:
>1341_bases ATGTTATCCAAACAAGACCAATTGACTGAGCTGGTACGAAAGCTTGAGTCGAAAAATCATGTGTTCTCCACCGATCCGCT GCTGATCACAGAGCGCTTGCAGGATGAGGCTGCCACACCCCTTCAAAAAATACGTCGCCGTGCTGAACGCATTGATAGTA ATGGCGCCTTAGCTGGTACGTTAAATAAAATCGATGGCCGTATTAAAGGCATTATCCTAATCATGAGTGTGCTGTGGTGC ATCTCAGGATTTTTGGGATTGTTTGCGCTGCTACAGGCCAATGTGGTCAACTTCTTTTATGTACTGGTGTGTTTGCTTGG TTTTCATACTGTGATGCTGCTTGGGTGGCTGATCTTCACGGTCATTAATCGCGGCAGTCAATCACCTAGCCTGATTACCA GCTTTATCAGCCCAAAGGCTTTAATTCGCGGCAAAGATGATGTGACCCAAGCGGCGGTAGAGCTATATGACGAGCAATTG CACCACACTGGCATGCGCTGGTATCTGAGTAAGTTTAGCCATCAGCTGTGGCTGGCCACTTTAACCGGTATGCTGTTTGC TATCATCTTTTTGCTGATTGTGCGTCAATACAGCTTTAGCTGGGAGTCTACCCTACTCTCTGATCAAGCGTTAATGAGCT TGACACATTGGCTTGGGTGGCTACCAAGTTTGGTGGGTTTTCACGTCCCTGATACTGAGGCGATTATCCAAAGTCGTCTG GCCACAGAGGCAATGCCCTTATCTATTGCCCGGCAATGGGCGAGCTTGCTTATTGGCAGCTTGCTCATGTATGGCATTGT GCCAAGGGCCATAGCTTGGGCATTGTGCGCGCTGATGTTTAATCGCCAAAAAATGAAGATTGACTTAAATCTACCTTACT ATCAAAAAATCCTCAATTTTTGGCAAAGAAAAGTGGTGGATGCAGATGACTTTGTCGAAAAAATACAGGCTGTCGCCCCT GTCGCAAAAATAAGTACGGGCAATAAATTGGTGGTATTGCTTGAGTATAAACACAGTGATCCTCATTGGTATCATGCGGC AGGCCAGGCCTTTATTCATCCTGCACCTGTTGAATTTGGGGTGCTGGATGATAGGGAGGATATGGATAAAATCCTGCAGT ATCTTGAGCAGCATGAGGTTCAAGTTTTGGTGGGTATTCATGCCAAAGCCTTGCCTGATCGTGGCACCATGCGTAAGTTA GATAAGATTGCCACTCATGCCAAACAAGGGGTTATTGTACAGCTGCTAGAGGACACCTCTAGTATGGAGAAGCAAGACAG CGTGCGCAGACAACAGTGGCAGGCGGCACTGGCTGAGCGCAATATTGGTCTGGTCTCATAG
Upstream 100 bases:
>100_bases ATGTGTGCCTCTTTTGCTGGGCAATGACGCCCTTAATCACTTTTTATTTGATTTATTTGGTATCGCGTAGCGTGATCGGC TGCCATCGACAAGGAATATC
Downstream 100 bases:
>100_bases CCATTATTTATACTTAATTTAGAAAAATTACTTGATAGTAAAAACTTTTTAATGGGTTGCCTCCCTGATAACTGCTAAAC TCAGAGAGATACTTGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MLSKQDQLTELVRKLESKNHVFSTDPLLITERLQDEAATPLQKIRRRAERIDSNGALAGTLNKIDGRIKGIILIMSVLWC ISGFLGLFALLQANVVNFFYVLVCLLGFHTVMLLGWLIFTVINRGSQSPSLITSFISPKALIRGKDDVTQAAVELYDEQL HHTGMRWYLSKFSHQLWLATLTGMLFAIIFLLIVRQYSFSWESTLLSDQALMSLTHWLGWLPSLVGFHVPDTEAIIQSRL ATEAMPLSIARQWASLLIGSLLMYGIVPRAIAWALCALMFNRQKMKIDLNLPYYQKILNFWQRKVVDADDFVEKIQAVAP VAKISTGNKLVVLLEYKHSDPHWYHAAGQAFIHPAPVEFGVLDDREDMDKILQYLEQHEVQVLVGIHAKALPDRGTMRKL DKIATHAKQGVIVQLLEDTSSMEKQDSVRRQQWQAALAERNIGLVS
Sequences:
>Translated_446_residues MLSKQDQLTELVRKLESKNHVFSTDPLLITERLQDEAATPLQKIRRRAERIDSNGALAGTLNKIDGRIKGIILIMSVLWC ISGFLGLFALLQANVVNFFYVLVCLLGFHTVMLLGWLIFTVINRGSQSPSLITSFISPKALIRGKDDVTQAAVELYDEQL HHTGMRWYLSKFSHQLWLATLTGMLFAIIFLLIVRQYSFSWESTLLSDQALMSLTHWLGWLPSLVGFHVPDTEAIIQSRL ATEAMPLSIARQWASLLIGSLLMYGIVPRAIAWALCALMFNRQKMKIDLNLPYYQKILNFWQRKVVDADDFVEKIQAVAP VAKISTGNKLVVLLEYKHSDPHWYHAAGQAFIHPAPVEFGVLDDREDMDKILQYLEQHEVQVLVGIHAKALPDRGTMRKL DKIATHAKQGVIVQLLEDTSSMEKQDSVRRQQWQAALAERNIGLVS >Mature_446_residues MLSKQDQLTELVRKLESKNHVFSTDPLLITERLQDEAATPLQKIRRRAERIDSNGALAGTLNKIDGRIKGIILIMSVLWC ISGFLGLFALLQANVVNFFYVLVCLLGFHTVMLLGWLIFTVINRGSQSPSLITSFISPKALIRGKDDVTQAAVELYDEQL HHTGMRWYLSKFSHQLWLATLTGMLFAIIFLLIVRQYSFSWESTLLSDQALMSLTHWLGWLPSLVGFHVPDTEAIIQSRL ATEAMPLSIARQWASLLIGSLLMYGIVPRAIAWALCALMFNRQKMKIDLNLPYYQKILNFWQRKVVDADDFVEKIQAVAP VAKISTGNKLVVLLEYKHSDPHWYHAAGQAFIHPAPVEFGVLDDREDMDKILQYLEQHEVQVLVGIHAKALPDRGTMRKL DKIATHAKQGVIVQLLEDTSSMEKQDSVRRQQWQAALAERNIGLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021296 [H]
Pfam domain/function: PF11067 DUF2868 [H]
EC number: NA
Molecular weight: Translated: 50567; Mature: 50567
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKQDQLTELVRKLESKNHVFSTDPLLITERLQDEAATPLQKIRRRAERIDSNGALAGT CCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEH LNKIDGRIKGIILIMSVLWCISGFLGLFALLQANVVNFFYVLVCLLGFHTVMLLGWLIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VINRGSQSPSLITSFISPKALIRGKDDVTQAAVELYDEQLHHTGMRWYLSKFSHQLWLAT HHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGMLFAIIFLLIVRQYSFSWESTLLSDQALMSLTHWLGWLPSLVGFHVPDTEAIIQSRL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATEAMPLSIARQWASLLIGSLLMYGIVPRAIAWALCALMFNRQKMKIDLNLPYYQKILNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH WQRKVVDADDFVEKIQAVAPVAKISTGNKLVVLLEYKHSDPHWYHAAGQAFIHPAPVEFG HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEECCCCCCCC VLDDREDMDKILQYLEQHEVQVLVGIHAKALPDRGTMRKLDKIATHAKQGVIVQLLEDTS CCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH SMEKQDSVRRQQWQAALAERNIGLVS HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLSKQDQLTELVRKLESKNHVFSTDPLLITERLQDEAATPLQKIRRRAERIDSNGALAGT CCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEH LNKIDGRIKGIILIMSVLWCISGFLGLFALLQANVVNFFYVLVCLLGFHTVMLLGWLIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VINRGSQSPSLITSFISPKALIRGKDDVTQAAVELYDEQLHHTGMRWYLSKFSHQLWLAT HHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGMLFAIIFLLIVRQYSFSWESTLLSDQALMSLTHWLGWLPSLVGFHVPDTEAIIQSRL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATEAMPLSIARQWASLLIGSLLMYGIVPRAIAWALCALMFNRQKMKIDLNLPYYQKILNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH WQRKVVDADDFVEKIQAVAPVAKISTGNKLVVLLEYKHSDPHWYHAAGQAFIHPAPVEFG HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEECCCCCCCC VLDDREDMDKILQYLEQHEVQVLVGIHAKALPDRGTMRKLDKIATHAKQGVIVQLLEDTS CCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH SMEKQDSVRRQQWQAALAERNIGLVS HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]