Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148652875

Identifier: 148652875

GI number: 148652875

Start: 1288253

End: 1288618

Strand: Direct

Name: 148652875

Synonym: PsycPRwf_1068

Alternate gene names: NA

Gene position: 1288253-1288618 (Clockwise)

Preceding gene: 148652872

Following gene: 148652876

Centisome position: 43.24

GC content: 39.89

Gene sequence:

>366_bases
ATGGAACAACAAATTAGCGAGCTTGAACAACAGCGTTTTAACTATTTACTAAATAAACAGTATGATGAGTTTGCTGCACT
GTGTGATGCCGATTTACGCTATGTGCACAGCAGTGGTGCGATTGATGACTTGTCTTCGTATTTACAAAAACTTAAGTCTG
GGTTCTATGAGTATCAACAGCTTGACTATGATATCAATCAGGTCATCGATATGCAGGATTATGTTATGGTTACCGGTGAT
TTTTATGCGCAGGTCTTAGTTGATGGCCAGCCTATCTCTTTGAAAAACCGCGCCCTCTGTATTTGGAAAAAGCGGGGTGA
TGAGTTTAAGTTTTTTATGTATCAGGGCACGCCTTTTACTAAGTGA

Upstream 100 bases:

>100_bases
CAGTGCGTAATGAGAAAGTTTTTTATAATAAAATAAGCTTAAAATTCGCCACATTGAAAGCTAAATTGACGTTAAAGAAA
ATTAGGTTAAAGAGGAAGTT

Downstream 100 bases:

>100_bases
TTGAACTGTGAGCTTCGGCTCATAGGTAGGTCTTTAAATATATGGGATATTATCTCATCTTTTAAATGACAAAAATTTTA
ATGCTAAAATAGACATCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD
FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK

Sequences:

>Translated_121_residues
MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD
FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK
>Mature_121_residues
MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD
FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14317; Mature: 14317

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQ
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDYDINQVIDMQDYVMVTGDFYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFT
CCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
K
C
>Mature Secondary Structure
MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQ
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDYDINQVIDMQDYVMVTGDFYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFT
CCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA