Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 148652811

GI number: 148652811

Start: 1194230

End: 1196035

Strand: Direct

Name: mmgC [H]

Synonym: PsycPRwf_1004

Alternate gene names: 148652811

Gene position: 1194230-1196035 (Clockwise)

Preceding gene: 148652809

Following gene: 148652812

Centisome position: 40.09

GC content: 47.95

Gene sequence:

>1806_bases
ATGGACGCACAGAGCTTAATTAATGAGTTTGAGTTACCCTTTCAGCTTTACGATGTACTAAATACCGAGCAATTATGTCA
GCACCCTAAATTCGCTGAACATTCACGTGATACCTTCGATGCCACCATCGATACCGCCAAAAAAATAGCCACCGATCTCT
TCTTACCGCATAACACAGTCGCTGATAAAAACGAGCCACAGTTCGATGGCAAAAAGGTAACGATGCTCAATGACGTAAAA
GTAGCCTTTGATGCTTATCGCCATTCTGGCTTTATCGCCGGCCGCTATGATTTTGATCAAGGTGGTATGCAGTTACCTGA
GACGGTGATGACGGCGGTGGCCGGTTACTTTATGGCAGCCAATCCATCAACCACTGCTTATCCATTTTTGACCACTGCAG
CGATTAATGTGTTGATGCACTTTGCCAATGATGAGGTAAAACAAGCCTTTGTACCACGCATGCTCAGCGGTGATTTTACC
GGTACTATGGCTTTGACTGAACCGCATGCCGGATCTTCTCTTGCCGATATCAGAACCACCGCCACACCCCATGATGACGG
CACTTATCGTATCCGTGGTAGCAAGATTTATATCTCAGGCGGAGATCATGAGTTAGCTGAAAACATTGTGCATTTGGTGT
TGGCTAAAGTGCCAGGCGGTCCTGCTGGCGTGAAGGGCATATCGCTATTTGCGGTACCAAAATACCGCTTGGATGCTAGT
GGCAAACCTGCTGAGCGTAACGATGTACATTTGGCCGGTCTAATTCATAAGCTGGGCTACCGCGGCACCACGTCAACGGC
GCTTAGCTTTGGCGATGCCAATGACTGTGTTGGCTATCTGATTGGCGAGGTGCATTTTGGCCTACGCTATATGTTTAAGA
TGATGAATGAGGCACGCATCGCAGTAGGCTTTGGCGCAGCTATGATTGGCTATCGTGGCTATCAGTATTCGCTGGCCTAT
GCCAAAGACCGTTTGCAAGGACGAGTGGCCCCACATCTTAAGCCTGATGATCCTGCGGCGGCCATCATCGAGCATAGCGA
TGTCAAGCGTATGCTATTGGCACAAAAGGCCTATAGCGAAGGCGGCATGGCTTTGTGTCTGTATGGCTCAAATCTCATTG
ATCGTATCAATACCTGCGATGATGACACACAAAAACAAGCCTTGTCTGAACTGCTGGATTTATTAACCCCTGTCTTAAAA
GCTTGGCCTTCAGAATATGGCCCCAAAGCCAATGATTTAGGTATTCAGGTATTGGGCGGCGCAGGCTACACCCGAGAGTA
TCAAGCAGAGCAGTTTTGGCGTGATAATCGTTTAAACCCCATTCACGAGGGCACCAATGGCATACAAGCCTTGGACTTAA
CTTTCCGCAAATTATGGCAAAATCAAGGGCTTGGATTACAGGTATTGCAGCAAGAAATCACTCGAGACTTGATTGCCATT
TCGACGTCGCAAACCGCGAAGCTTGCTAACAAATTGCAGATTTATATCGAACAGCTGCAGCCGCTGCTACAGCATGTGGG
TCAAACCCTAAGCACACCAAAAGCTGCCACCTTGAGTGCCAATGCACAAGCTTTAATGACTGTATTTGCCACTATTGTTA
TGAGCTGGATTTGGATTCGCCAAGCCAGCAAGGCCGAGCAGCTATTAGCACTCACTGAAGATGGCGCTAAGCAAAACTTT
TATCGTGGCAAAATTCAAGCAGCAAAATACTTCATCGATTGGGAGCTGCCGCTCATCCAGCGTGATATTGAGCTGCTGAC
CACGGACAATGCGGTGTGCCACAGCATGCAGCCTGAGTGGTTCTAA

Upstream 100 bases:

>100_bases
AGATGTCAGTTACCACCTTAATTATGTCATAAATGACAATATGGTAAGGCACAAAAATGAACTAATATTGAACCACTGAT
GATTGTTAAGAGAGAACAGC

Downstream 100 bases:

>100_bases
CGGATCTAATTTAACATAAAAACCTAACTAAGCTGAGTATCAAAATGGAATTTGAACCCAACAAAACTGTCGCCAACGTC
CTCAACAAACGCATTTTAAT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: 2-butenoyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MDAQSLINEFELPFQLYDVLNTEQLCQHPKFAEHSRDTFDATIDTAKKIATDLFLPHNTVADKNEPQFDGKKVTMLNDVK
VAFDAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAANPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFT
GTMALTEPHAGSSLADIRTTATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDAS
GKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLAY
AKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLTPVLK
AWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAI
STSQTAKLANKLQIYIEQLQPLLQHVGQTLSTPKAATLSANAQALMTVFATIVMSWIWIRQASKAEQLLALTEDGAKQNF
YRGKIQAAKYFIDWELPLIQRDIELLTTDNAVCHSMQPEWF

Sequences:

>Translated_601_residues
MDAQSLINEFELPFQLYDVLNTEQLCQHPKFAEHSRDTFDATIDTAKKIATDLFLPHNTVADKNEPQFDGKKVTMLNDVK
VAFDAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAANPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFT
GTMALTEPHAGSSLADIRTTATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDAS
GKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLAY
AKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLTPVLK
AWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAI
STSQTAKLANKLQIYIEQLQPLLQHVGQTLSTPKAATLSANAQALMTVFATIVMSWIWIRQASKAEQLLALTEDGAKQNF
YRGKIQAAKYFIDWELPLIQRDIELLTTDNAVCHSMQPEWF
>Mature_601_residues
MDAQSLINEFELPFQLYDVLNTEQLCQHPKFAEHSRDTFDATIDTAKKIATDLFLPHNTVADKNEPQFDGKKVTMLNDVK
VAFDAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAANPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFT
GTMALTEPHAGSSLADIRTTATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDAS
GKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARIAVGFGAAMIGYRGYQYSLAY
AKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSEGGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLTPVLK
AWPSEYGPKANDLGIQVLGGAGYTREYQAEQFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAI
STSQTAKLANKLQIYIEQLQPLLQHVGQTLSTPKAATLSANAQALMTVFATIVMSWIWIRQASKAEQLLALTEDGAKQNF
YRGKIQAAKYFIDWELPLIQRDIELLTTDNAVCHSMQPEWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=310, Percent_Identity=28.3870967741935, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4501857, Length=345, Percent_Identity=24.9275362318841, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4501859, Length=345, Percent_Identity=26.0869565217391, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4557233, Length=341, Percent_Identity=27.5659824046921, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI87082384, Length=291, Percent_Identity=28.1786941580756, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=365, Percent_Identity=26.5753424657534, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=311, Percent_Identity=25.4019292604502, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666513, Length=378, Percent_Identity=24.6031746031746, Blast_Score=83, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.2

Molecular weight: Translated: 66526; Mature: 66526

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQSLINEFELPFQLYDVLNTEQLCQHPKFAEHSRDTFDATIDTAKKIATDLFLPHNTV
CCHHHHHHHHCCCHHHHHHCCHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
ADKNEPQFDGKKVTMLNDVKVAFDAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAA
CCCCCCCCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHEEC
NPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFTGTMALTEPHAGSSLADIRTT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCC
ATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDAS
CCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCC
GKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARI
CCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
AVGFGAAMIGYRGYQYSLAYAKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSE
EEEHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLTPVLKAWPSEYGPKANDLGIQVLGG
CCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECC
AGYTREYQAEQFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAI
CCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
STSQTAKLANKLQIYIEQLQPLLQHVGQTLSTPKAATLSANAQALMTVFATIVMSWIWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
QASKAEQLLALTEDGAKQNFYRGKIQAAKYFIDWELPLIQRDIELLTTDNAVCHSMQPEW
HHHHHHHHHHCCCCCCCCCHHHCEEEEEEEEEECCCHHHHHCHHHEECCCHHHHCCCCCC
F
C
>Mature Secondary Structure
MDAQSLINEFELPFQLYDVLNTEQLCQHPKFAEHSRDTFDATIDTAKKIATDLFLPHNTV
CCHHHHHHHHCCCHHHHHHCCHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
ADKNEPQFDGKKVTMLNDVKVAFDAYRHSGFIAGRYDFDQGGMQLPETVMTAVAGYFMAA
CCCCCCCCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHEEC
NPSTTAYPFLTTAAINVLMHFANDEVKQAFVPRMLSGDFTGTMALTEPHAGSSLADIRTT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCC
ATPHDDGTYRIRGSKIYISGGDHELAENIVHLVLAKVPGGPAGVKGISLFAVPKYRLDAS
CCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCC
GKPAERNDVHLAGLIHKLGYRGTTSTALSFGDANDCVGYLIGEVHFGLRYMFKMMNEARI
CCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
AVGFGAAMIGYRGYQYSLAYAKDRLQGRVAPHLKPDDPAAAIIEHSDVKRMLLAQKAYSE
EEEHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GGMALCLYGSNLIDRINTCDDDTQKQALSELLDLLTPVLKAWPSEYGPKANDLGIQVLGG
CCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECC
AGYTREYQAEQFWRDNRLNPIHEGTNGIQALDLTFRKLWQNQGLGLQVLQQEITRDLIAI
CCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
STSQTAKLANKLQIYIEQLQPLLQHVGQTLSTPKAATLSANAQALMTVFATIVMSWIWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
QASKAEQLLALTEDGAKQNFYRGKIQAAKYFIDWELPLIQRDIELLTTDNAVCHSMQPEW
HHHHHHHHHHCCCCCCCCCHHHCEEEEEEEEEECCCHHHHHCHHHEECCCHHHHCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: butanoyl-CoA; acceptor

Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]