| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is hit [H]
Identifier: 148652759
GI number: 148652759
Start: 1138667
End: 1139098
Strand: Direct
Name: hit [H]
Synonym: PsycPRwf_0952
Alternate gene names: 148652759
Gene position: 1138667-1139098 (Clockwise)
Preceding gene: 148652758
Following gene: 148652760
Centisome position: 38.22
GC content: 44.44
Gene sequence:
>432_bases ATGAGCATTAAGCATTACGAAGACGATAATATTTTTGCTAAGATTTTATCGGGTGATATCCCTTGTCACAAGGTATACGA AGATGACAAGACCTTAGCTTTTATGGATATCATGCCGCAAGCTAAAGGTCATGTGTTGGTTATTCCTAAACAAAAAGCGG TAGAGCTTTCGCAGCTTGAGCCTGAGTATGCCAGTGCGGTACTGATGACGGCCAAAAAGGTAATGGCAGCACAGCGTAAA GTATTTGATCGTGAAGGCATTATTCAAATGCAGTTAAATGGCGCTGAGGCAGGTCAAACCGTCTTCCATTATCATGTGCA TCTCATTCCCTCTAATATCCATGAGCTGGGTAAACATGCTGTGGTTCAAGCAGACATGGCAGAGCTTGCACAGCAGGCTG AGCAGCTAGCAGCAGCGATTGAGCACGCTTAA
Upstream 100 bases:
>100_bases TGCAACTTGTCAGCGGTTGGTGTTGAATAGTTGGATAAATACGACTGATGTTGAGGTAAACGTATGCCTCATATAAACCA CAACAAATAAGGACATAACA
Downstream 100 bases:
>100_bases CAGGCCGCTTTGGGCGCTGAGTGTCTAAACTTTAGGTTTTGAGTTAACGCTTGAGTTTTAGGTATTAGCCCTTACAATAA CGGCAGGATAAAACGGGCTT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSIKHYEDDNIFAKILSGDIPCHKVYEDDKTLAFMDIMPQAKGHVLVIPKQKAVELSQLEPEYASAVLMTAKKVMAAQRK VFDREGIIQMQLNGAEAGQTVFHYHVHLIPSNIHELGKHAVVQADMAELAQQAEQLAAAIEHA
Sequences:
>Translated_143_residues MSIKHYEDDNIFAKILSGDIPCHKVYEDDKTLAFMDIMPQAKGHVLVIPKQKAVELSQLEPEYASAVLMTAKKVMAAQRK VFDREGIIQMQLNGAEAGQTVFHYHVHLIPSNIHELGKHAVVQADMAELAQQAEQLAAAIEHA >Mature_142_residues SIKHYEDDNIFAKILSGDIPCHKVYEDDKTLAFMDIMPQAKGHVLVIPKQKAVELSQLEPEYASAVLMTAKKVMAAQRKV FDREGIIQMQLNGAEAGQTVFHYHVHLIPSNIHELGKHAVVQADMAELAQQAEQLAAAIEHA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=103, Percent_Identity=38.8349514563107, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17506713, Length=106, Percent_Identity=35.8490566037736, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320078, Length=134, Percent_Identity=32.8358208955224, Blast_Score=68, Evalue=4e-13, Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=38.0952380952381, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581222, Length=104, Percent_Identity=38.4615384615385, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15899; Mature: 15767
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKHYEDDNIFAKILSGDIPCHKVYEDDKTLAFMDIMPQAKGHVLVIPKQKAVELSQLE CCCCCCCCCHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHCC PEYASAVLMTAKKVMAAQRKVFDREGIIQMQLNGAEAGQTVFHYHVHLIPSNIHELGKHA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHH VVQADMAELAQQAEQLAAAIEHA HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIKHYEDDNIFAKILSGDIPCHKVYEDDKTLAFMDIMPQAKGHVLVIPKQKAVELSQLE CCCCCCCCHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHCC PEYASAVLMTAKKVMAAQRKVFDREGIIQMQLNGAEAGQTVFHYHVHLIPSNIHELGKHA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHH VVQADMAELAQQAEQLAAAIEHA HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]