Click here to switch to the map view.

The map label for this gene is recJ [H]

Identifier: 148652599

GI number: 148652599

Start: 942058

End: 943893

Strand: Direct

Name: recJ [H]

Synonym: PsycPRwf_0790

Alternate gene names: 148652599

Gene position: 942058-943893 (Clockwise)

Preceding gene: 148652597

Following gene: 148652610

Centisome position: 31.62

GC content: 50.0

Gene sequence:

>1836_bases
ATGCTAAAGTTAACCCCCAGATTTACCGGCACCTTGCCTGATGATTTACCTGCCTGTTTTACCCAGATGTATCAACAAGC
CCCGACCCTGACGCGCCTATTTTTGGCACGTGGCATTCAAAGTGACCAAGACTTAGACTATGGGTTATCTGCGCTACTGC
CCGCGCAAGGTCTGAGCGATGTCGATGAAGCGGTGACGCTGATGGATGAGGCCATTGAGGCTCAGCGGCGTATTTTGATT
GTTGGTGATTTTGATTGTGACGGAGCGACCAGTACGGCGCTGATGATGCGCATCCTGTCACAGATGGGTGCCGTAGTAGA
TTTTGTGGTGCCGGATCGTTTTAAATATGGCTATGGCCTGACGCCTGAGATAGTACAGCTGGGTATAGAGCAGTACCAGC
CGGATATGATTATTACTGTAGATAATGGCATCTCAAGCCATGAGGGGGTTGATAAGGCCATTGCCAATGGCATTAAGGTA
ATTATCACCGATCATCACCTCACCACTAAGAGCAAGCCTAATGCCCATGCTGTGGTGAATCCCAATCAGCTGGGCTGCTC
ATTTGAGAGTAAGGCCTTGGTGGGCGTAGGTGTGGCCTTTTATCTGCTCGGGCGTCTGGCCAAGTACCGCCGAGAAGCAG
GGCGATCAACGGCCCAAGTGAGCCGTTATTTAGACTTAGTGGCCTTGGGCACCATCGCCGATGTGGGCGTGCTTGATCAC
AACAACCGCATCTTGGTCAATCACGGCTTGGCTGCGATAAGAGCAGGGCGCTGCTCGCTGGGTATATTGGCGCTGCTTGA
GCTGGCGGGGCGTGATTACCAAAAGATGAGCGTACAAGACTTTGGCTTCGTCATTGGCCCCCGTATCAATGCGGCAGGGC
GCATGGACAATATGCGTATTGGTATTGAATGCTTGATGGCCGATGACATGAGTGACGCCAAGCGTTTGGCCTTTGAGCTT
GATAAGCTGAACAAGGAGCGCCGCTATGTTGAGGGCGAGATGCGTGAGCAGGCCGATGAGATTTTACGTCAGCTGCAGCC
AAACTCAGACCGCAGTCAGGCACAGACGACTGATGAGCAAAGTGATGATAGTGATGATAGTTTAAAGCAACAAGCAGAGT
CTTTTACTGATAAAGCACAGCCGCGCAGTTTGATTTTGTATCAAGACAACTGGCATCAAGGGGTTATTGGTATTGTGGCC
GGCCGCCTTAAAGAAAGCCATTATCGACCTGCCATTGTATTTGCTCCGGCAGATGATACTCAGCTTGACGGGCAAGATGC
GATTAAAGGCTCAGCACGCTCCATCCCAGGCATTCATATTCGTGATGCCATAGAGCGCATCGCAGAGAGCCATCCTGAGC
TGATTACCCACTTTGGTGGGCATGCCATGGCAGCGGGGCTTACGCTTAAAAGAAAGGATTTTAAGGCGTTTGCTGAGGCA
TTTGAGCTGCAAATGCAAAGTGTGGAGGCTTCGGTATTTGAGGAGCAGCAGTTCACCGATGGTCAACTGCTGGCAGAAGA
CTTTAGCTTACAGTTCGTTGAGGCGTTGACACAAAACCATATCTGGGGTCATGGTTTTGTGCCACCGCAGTTCGATGGTG
TGTTTGACGTGGTGCAGGCGCGAATTTTAAAAGACAAGCATTTAAAGCTATCGCTAAAATACCCTGGGGTGATGTATCCT
ATTGATGCCATCTGGTTTAACTATGACCCCAAAAAGTGGGATTACCGTGCCCAACAAGTACATGTATTGTTTGAGCTTAG
TATTAATGAGTGGCAGGGTAATCAAAATATTCAGCTGATGGTAAAGGACGTAGCGGTCACCCAAATTAGCCCCTAA

Upstream 100 bases:

>100_bases
GCTAAATTTTGTAAATATATGATTATTTTATTTTAATACCGTTTTTGAGTATTTGACCCCATATTAATATAAACCCAACT
AGAGTTGAATAAAGACCACC

Downstream 100 bases:

>100_bases
GCCGCTATGAATTAAATGACTATTTGACCAAGCGGATAGAAGGCAAATGCCAGTCAAAGCGCAGTGCCAACACGCGAATA
AAGAAAATAACGCCGAGGGT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MLKLTPRFTGTLPDDLPACFTQMYQQAPTLTRLFLARGIQSDQDLDYGLSALLPAQGLSDVDEAVTLMDEAIEAQRRILI
VGDFDCDGATSTALMMRILSQMGAVVDFVVPDRFKYGYGLTPEIVQLGIEQYQPDMIITVDNGISSHEGVDKAIANGIKV
IITDHHLTTKSKPNAHAVVNPNQLGCSFESKALVGVGVAFYLLGRLAKYRREAGRSTAQVSRYLDLVALGTIADVGVLDH
NNRILVNHGLAAIRAGRCSLGILALLELAGRDYQKMSVQDFGFVIGPRINAAGRMDNMRIGIECLMADDMSDAKRLAFEL
DKLNKERRYVEGEMREQADEILRQLQPNSDRSQAQTTDEQSDDSDDSLKQQAESFTDKAQPRSLILYQDNWHQGVIGIVA
GRLKESHYRPAIVFAPADDTQLDGQDAIKGSARSIPGIHIRDAIERIAESHPELITHFGGHAMAAGLTLKRKDFKAFAEA
FELQMQSVEASVFEEQQFTDGQLLAEDFSLQFVEALTQNHIWGHGFVPPQFDGVFDVVQARILKDKHLKLSLKYPGVMYP
IDAIWFNYDPKKWDYRAQQVHVLFELSINEWQGNQNIQLMVKDVAVTQISP

Sequences:

>Translated_611_residues
MLKLTPRFTGTLPDDLPACFTQMYQQAPTLTRLFLARGIQSDQDLDYGLSALLPAQGLSDVDEAVTLMDEAIEAQRRILI
VGDFDCDGATSTALMMRILSQMGAVVDFVVPDRFKYGYGLTPEIVQLGIEQYQPDMIITVDNGISSHEGVDKAIANGIKV
IITDHHLTTKSKPNAHAVVNPNQLGCSFESKALVGVGVAFYLLGRLAKYRREAGRSTAQVSRYLDLVALGTIADVGVLDH
NNRILVNHGLAAIRAGRCSLGILALLELAGRDYQKMSVQDFGFVIGPRINAAGRMDNMRIGIECLMADDMSDAKRLAFEL
DKLNKERRYVEGEMREQADEILRQLQPNSDRSQAQTTDEQSDDSDDSLKQQAESFTDKAQPRSLILYQDNWHQGVIGIVA
GRLKESHYRPAIVFAPADDTQLDGQDAIKGSARSIPGIHIRDAIERIAESHPELITHFGGHAMAAGLTLKRKDFKAFAEA
FELQMQSVEASVFEEQQFTDGQLLAEDFSLQFVEALTQNHIWGHGFVPPQFDGVFDVVQARILKDKHLKLSLKYPGVMYP
IDAIWFNYDPKKWDYRAQQVHVLFELSINEWQGNQNIQLMVKDVAVTQISP
>Mature_611_residues
MLKLTPRFTGTLPDDLPACFTQMYQQAPTLTRLFLARGIQSDQDLDYGLSALLPAQGLSDVDEAVTLMDEAIEAQRRILI
VGDFDCDGATSTALMMRILSQMGAVVDFVVPDRFKYGYGLTPEIVQLGIEQYQPDMIITVDNGISSHEGVDKAIANGIKV
IITDHHLTTKSKPNAHAVVNPNQLGCSFESKALVGVGVAFYLLGRLAKYRREAGRSTAQVSRYLDLVALGTIADVGVLDH
NNRILVNHGLAAIRAGRCSLGILALLELAGRDYQKMSVQDFGFVIGPRINAAGRMDNMRIGIECLMADDMSDAKRLAFEL
DKLNKERRYVEGEMREQADEILRQLQPNSDRSQAQTTDEQSDDSDDSLKQQAESFTDKAQPRSLILYQDNWHQGVIGIVA
GRLKESHYRPAIVFAPADDTQLDGQDAIKGSARSIPGIHIRDAIERIAESHPELITHFGGHAMAAGLTLKRKDFKAFAEA
FELQMQSVEASVFEEQQFTDGQLLAEDFSLQFVEALTQNHIWGHGFVPPQFDGVFDVVQARILKDKHLKLSLKYPGVMYP
IDAIWFNYDPKKWDYRAQQVHVLFELSINEWQGNQNIQLMVKDVAVTQISP

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=605, Percent_Identity=41.8181818181818, Blast_Score=456, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 68023; Mature: 68023

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLTPRFTGTLPDDLPACFTQMYQQAPTLTRLFLARGIQSDQDLDYGLSALLPAQGLSD
CCEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHCHHHHCCCCCCCH
VDEAVTLMDEAIEAQRRILIVGDFDCDGATSTALMMRILSQMGAVVDFVVPDRFKYGYGL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHEEEECCCCCCCCCCC
TPEIVQLGIEQYQPDMIITVDNGISSHEGVDKAIANGIKVIITDHHLTTKSKPNAHAVVN
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECCEEECCCCCCCEEEEC
PNQLGCSFESKALVGVGVAFYLLGRLAKYRREAGRSTAQVSRYLDLVALGTIADVGVLDH
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEC
NNRILVNHGLAAIRAGRCSLGILALLELAGRDYQKMSVQDFGFVIGPRINAAGRMDNMRI
CCEEEEECCHHHHCCCCCHHHHHHHHHHHCCCHHHCCHHHCCEEECCCCCCCCCCCCCEE
GIECLMADDMSDAKRLAFELDKLNKERRYVEGEMREQADEILRQLQPNSDRSQAQTTDEQ
EEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
SDDSDDSLKQQAESFTDKAQPRSLILYQDNWHQGVIGIVAGRLKESHYRPAIVFAPADDT
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
QLDGQDAIKGSARSIPGIHIRDAIERIAESHPELITHFGGHAMAAGLTLKRKDFKAFAEA
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHCCEEEHHHHHHHHHH
FELQMQSVEASVFEEQQFTDGQLLAEDFSLQFVEALTQNHIWGHGFVPPQFDGVFDVVQA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RILKDKHLKLSLKYPGVMYPIDAIWFNYDPKKWDYRAQQVHVLFELSINEWQGNQNIQLM
HHHCCCCEEEEEECCCEEEEHHHEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEE
VKDVAVTQISP
EEEEEEEECCC
>Mature Secondary Structure
MLKLTPRFTGTLPDDLPACFTQMYQQAPTLTRLFLARGIQSDQDLDYGLSALLPAQGLSD
CCEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHCHHHHCCCCCCCH
VDEAVTLMDEAIEAQRRILIVGDFDCDGATSTALMMRILSQMGAVVDFVVPDRFKYGYGL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHEEEECCCCCCCCCCC
TPEIVQLGIEQYQPDMIITVDNGISSHEGVDKAIANGIKVIITDHHLTTKSKPNAHAVVN
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECCEEECCCCCCCEEEEC
PNQLGCSFESKALVGVGVAFYLLGRLAKYRREAGRSTAQVSRYLDLVALGTIADVGVLDH
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEC
NNRILVNHGLAAIRAGRCSLGILALLELAGRDYQKMSVQDFGFVIGPRINAAGRMDNMRI
CCEEEEECCHHHHCCCCCHHHHHHHHHHHCCCHHHCCHHHCCEEECCCCCCCCCCCCCEE
GIECLMADDMSDAKRLAFELDKLNKERRYVEGEMREQADEILRQLQPNSDRSQAQTTDEQ
EEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
SDDSDDSLKQQAESFTDKAQPRSLILYQDNWHQGVIGIVAGRLKESHYRPAIVFAPADDT
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
QLDGQDAIKGSARSIPGIHIRDAIERIAESHPELITHFGGHAMAAGLTLKRKDFKAFAEA
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHCCEEEHHHHHHHHHH
FELQMQSVEASVFEEQQFTDGQLLAEDFSLQFVEALTQNHIWGHGFVPPQFDGVFDVVQA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RILKDKHLKLSLKYPGVMYPIDAIWFNYDPKKWDYRAQQVHVLFELSINEWQGNQNIQLM
HHHCCCCEEEEEECCCEEEEHHHEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEE
VKDVAVTQISP
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]