| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652437
Identifier: 148652437
GI number: 148652437
Start: 753819
End: 755060
Strand: Direct
Name: 148652437
Synonym: PsycPRwf_0625
Alternate gene names: NA
Gene position: 753819-755060 (Clockwise)
Preceding gene: 148652436
Following gene: 148652438
Centisome position: 25.3
GC content: 50.24
Gene sequence:
>1242_bases ATGACTGCTAATACCTTTAATACCGAGACTGCACGCTCGCCGCTCGTTTGTGATGCACAGGCACAGCCAGATCAAAAGGA GTCAGTGACTCGTATTGCCATTATTGGTGCTGGGTTGACAGGGCTGATGAGTGCGCAGCTGTTAGAGCAAGCATTTTTGC GGCAGGGCCGGGCTGTGGCCATCGAACTATTCGAAAAATCTGCCGGGGTCGGGCGTCTGGCGACTCGTTACAAAAAGCCG CCGAGCGGGGGAGATAGGCTGTGGCAGTTCGACTTTGGGGCACAGTTTTTTACCGCAAAATCAGAGGCATTTCAGCAGTA TTTGCAGCCTTGGATTAATCGTAAGACCATTGAGCCTTGGCAGGCTAAGGTGGCTCAGGTAGCTATAGTAGATGAGGGGT TGCCGCACAATCCAGTTAGTCATATTGAGCCTGCTAAAGTTTGGGCAGATAGCCAGCCGCGCTATATTGCCACTCCAAAG ATGACCCATTTTGGCCGTGAGTTGGCCAAAGCTCTGACCCACACGGCTATCAAGTACAAGACTCGAGTTGCGCCTTTATC TAGTCAATCCATCATACAGACTGCACCAACCGCTACACATTCTGCACATACAGACACACTCGCTGGTGACTATAAAACGC TATTGTGCGATGAGCAGGGTACCGTCTTAGGCAGCTATGATTGGGTTATCTGTACTGCGCCGCAAGCGCAAGCGGTTGAG CTATTTGCGGATACAGACTTTGCCCATTTGCAGGCCATTCAATTGCCTCAGATGCTGGCATGCTATAGCCTAATGCTCGG CTGGAATCAGGGGCAAGTATTACCGCAAGTACTACAAGATAAAGACTCAGACATACTGCAAGTGAATGATAAACACGCTG TGATAGAGACTGTCTTTGCTGAGCACCATAAGCCCGGCCGAGAGCAGCTGCTGCCAAGTATAACCCTTCATGCCTCAAAT AATTGGGCACAGGCCAATGTCGATCAAGATATTGAGCAAGTTAAAGCGCTCATGTATCAAGCTGCACGGCAGATACTAAG CTGGGATGAGGACAGTGCTCCGGAGTATGTGGACTGTCATCGTTGGCGCTATGCCGCTACGCAGCCGCCGTGTGTCAGTG ACTATATCGCCTATGTAGATACAAAAAAACAGTGGATTGTCACTGGAGACTGGTGCGATGAGGGGCGTATCGAAAGCTGC TTTAAAGCGGCCAGTGCGGTGGTTAAGCTTATTACACATTAA
Upstream 100 bases:
>100_bases AGCTTAGTAGATTTGCCACAATGAACCGCGCTAAGACAGCGCAGGGCTCCGCTTATCTTTTTATCTATCACCCTCTTTTT ATTCTTATAATGGCTTATCT
Downstream 100 bases:
>100_bases TTTTTTATATTAATTGGGCTTGCTAAAGCTTTTATCACCAGTCGCCGTAAAACCACCCACTTCAGGGGGTGGATATAAGG CGACACACACTGTCGTGATC
Product: NAD/FAD-dependent oxidoreductase-like protein
Products: NA
Alternate protein names: Transmembrane Protein; NAD/FAD-Dependent Oxidoreductase; NAD/FAD-Dependent Oxidoreductase-Like Protein; Deoxyribodipyrimidine Photolyase; NAD/FAD-Dependent Oxidoreductase-Like; Amine Oxidase Flavin-Containing
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTANTFNTETARSPLVCDAQAQPDQKESVTRIAIIGAGLTGLMSAQLLEQAFLRQGRAVAIELFEKSAGVGRLATRYKKP PSGGDRLWQFDFGAQFFTAKSEAFQQYLQPWINRKTIEPWQAKVAQVAIVDEGLPHNPVSHIEPAKVWADSQPRYIATPK MTHFGRELAKALTHTAIKYKTRVAPLSSQSIIQTAPTATHSAHTDTLAGDYKTLLCDEQGTVLGSYDWVICTAPQAQAVE LFADTDFAHLQAIQLPQMLACYSLMLGWNQGQVLPQVLQDKDSDILQVNDKHAVIETVFAEHHKPGREQLLPSITLHASN NWAQANVDQDIEQVKALMYQAARQILSWDEDSAPEYVDCHRWRYAATQPPCVSDYIAYVDTKKQWIVTGDWCDEGRIESC FKAASAVVKLITH
Sequences:
>Translated_413_residues MTANTFNTETARSPLVCDAQAQPDQKESVTRIAIIGAGLTGLMSAQLLEQAFLRQGRAVAIELFEKSAGVGRLATRYKKP PSGGDRLWQFDFGAQFFTAKSEAFQQYLQPWINRKTIEPWQAKVAQVAIVDEGLPHNPVSHIEPAKVWADSQPRYIATPK MTHFGRELAKALTHTAIKYKTRVAPLSSQSIIQTAPTATHSAHTDTLAGDYKTLLCDEQGTVLGSYDWVICTAPQAQAVE LFADTDFAHLQAIQLPQMLACYSLMLGWNQGQVLPQVLQDKDSDILQVNDKHAVIETVFAEHHKPGREQLLPSITLHASN NWAQANVDQDIEQVKALMYQAARQILSWDEDSAPEYVDCHRWRYAATQPPCVSDYIAYVDTKKQWIVTGDWCDEGRIESC FKAASAVVKLITH >Mature_412_residues TANTFNTETARSPLVCDAQAQPDQKESVTRIAIIGAGLTGLMSAQLLEQAFLRQGRAVAIELFEKSAGVGRLATRYKKPP SGGDRLWQFDFGAQFFTAKSEAFQQYLQPWINRKTIEPWQAKVAQVAIVDEGLPHNPVSHIEPAKVWADSQPRYIATPKM THFGRELAKALTHTAIKYKTRVAPLSSQSIIQTAPTATHSAHTDTLAGDYKTLLCDEQGTVLGSYDWVICTAPQAQAVEL FADTDFAHLQAIQLPQMLACYSLMLGWNQGQVLPQVLQDKDSDILQVNDKHAVIETVFAEHHKPGREQLLPSITLHASNN WAQANVDQDIEQVKALMYQAARQILSWDEDSAPEYVDCHRWRYAATQPPCVSDYIAYVDTKKQWIVTGDWCDEGRIESCF KAASAVVKLITH
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46005; Mature: 45874
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANTFNTETARSPLVCDAQAQPDQKESVTRIAIIGAGLTGLMSAQLLEQAFLRQGRAVA CCCCCCCCCCCCCCEEECCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE IELFEKSAGVGRLATRYKKPPSGGDRLWQFDFGAQFFTAKSEAFQQYLQPWINRKTIEPW EEEHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHH QAKVAQVAIVDEGLPHNPVSHIEPAKVWADSQPRYIATPKMTHFGRELAKALTHTAIKYK HHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH TRVAPLSSQSIIQTAPTATHSAHTDTLAGDYKTLLCDEQGTVLGSYDWVICTAPQAQAVE HEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEECCCCCEEE LFADTDFAHLQAIQLPQMLACYSLMLGWNQGQVLPQVLQDKDSDILQVNDKHAVIETVFA EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHH EHHKPGREQLLPSITLHASNNWAQANVDQDIEQVKALMYQAARQILSWDEDSAPEYVDCH HHCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH RWRYAATQPPCVSDYIAYVDTKKQWIVTGDWCDEGRIESCFKAASAVVKLITH CEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TANTFNTETARSPLVCDAQAQPDQKESVTRIAIIGAGLTGLMSAQLLEQAFLRQGRAVA CCCCCCCCCCCCCEEECCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE IELFEKSAGVGRLATRYKKPPSGGDRLWQFDFGAQFFTAKSEAFQQYLQPWINRKTIEPW EEEHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHH QAKVAQVAIVDEGLPHNPVSHIEPAKVWADSQPRYIATPKMTHFGRELAKALTHTAIKYK HHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH TRVAPLSSQSIIQTAPTATHSAHTDTLAGDYKTLLCDEQGTVLGSYDWVICTAPQAQAVE HEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEECCCCCEEE LFADTDFAHLQAIQLPQMLACYSLMLGWNQGQVLPQVLQDKDSDILQVNDKHAVIETVFA EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHH EHHKPGREQLLPSITLHASNNWAQANVDQDIEQVKALMYQAARQILSWDEDSAPEYVDCH HHCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH RWRYAATQPPCVSDYIAYVDTKKQWIVTGDWCDEGRIESCFKAASAVVKLITH CEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA