| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is murC
Identifier: 148652337
GI number: 148652337
Start: 627401
End: 628831
Strand: Direct
Name: murC
Synonym: PsycPRwf_0525
Alternate gene names: 148652337
Gene position: 627401-628831 (Clockwise)
Preceding gene: 148652336
Following gene: 148652338
Centisome position: 21.06
GC content: 47.38
Gene sequence:
>1431_bases ATGTCAAAATCAGCCCTGCCAAAAAGATTAATCGAAATTCCAGAAATGCGCCGCATTAAAAGCATTCACTTTATCGGCGT GGGTGGTGCAGGGATGTGCGGGATTGCTGAGGTAATGAAAAACCAAGGCTATGGTGTTAGTGGCTCAGACATTAAAGAAA GTCCGGTAACCAAGCGCTTACAAAGCTTGGGAATTGAAGTATTTATCGGTCATGACTCAAAAAATATTGCCAATGCCGAC GTGGTCGTGGTCTCTTCTGCCATTGATCGCGAGAATCCTGAGATTCAGGCTGCTCTAAAAGCACAATTACCCGTGGTACG CCGTGCTGATATGCTGGGTGAATTAATGCGTTATCGTCATGGCATCGCCGTGGCCGGTGCCCATGGTAAGACGACAACCA CGAGCTTGCTGACCATGATGATGACAGAGGCCGGGTTTGATCCTACCTATGTTATCGGTGGTAAACTTAATGCTTCAGGA AAAAATGCTTCGCTGGGTGAAAGCCGCTATTTAATTGCAGAAGCTGATGAGTCAGATGCTTCATTTTTGACCCTGCATCC TATGGCTGCTATTGTGACCAATATTGACCAAGATCATATGGATACTTACGGTAATAGCTTTGATAAATTAAAAGCCGCTT ACATCCAGTTTTTACAAAATATGCCGTTTTATGGTCTGGCTGTGGTCTGCGGTGATGATAAAGAGCTGTTCGATATGATT GATGATATTGGTCGCCCAGTATTAACTTTCGGCTTAGAGCCGCACAACAATGTGCAGGCCACCAATGTACGTGTTGATGG CACTAAAACTCACTTCACCGTGCTGCGTAAAGACCGTGAGCCATTGGAATTAACGTTAAACATTCCAGGGCAACACAACG TACTTAACGCCTTAGCTGCCATTACTATGGCCACCGATGAGGGGGTGAATGATGATGCTATTAAACGGGCGTTGGCAAAG TTTGCTGGGGTAGGTCGCCGCTTTGAGCAGCAAGCTTGCGTGGCCAAAGATGACGGTGATGTTTTATTAATTGATGACTA TGGTCATCATCCAGTAGAGGTGGCAGCGACTATTAAAGCGGCGCGCGCCAGTTATCCTGAGCGCCGTTTGGTGATGTTAT TCCAGCCGCACCGTTACAGCCGTACTCGTGATTGTTATGATGACTTTGTGGCGGTATTATCACAAGTGGATGTGCTGCTA TTGCTGGATGTGTATAGTGCCGGTGAAGCGCCAATTGTGGGCGCTGATACCAAGTCATTGGCTCGTAGTATCCGCTTGCG CGGTGAAGTTGAGCCGGTTGTGGTGGATAAAGATGAGCTGGCCCCTGTGATGCAGCGGGTGCTACAAGCGGGTGATATGC TCATTACACAAGGCGCAGGCAACGTAGGTCAGCTAAGCCAACAATTAGCGGCCAATAACCTGTATCTTTAA
Upstream 100 bases:
>100_bases TATTACCGTAAAACCTATTTTAAACGGTATTTAGCTCATTACTAGGTAGCTGTTATTTCTACCAAATATTTATTGTCATT TTTTATTGAAAGAGAACCCT
Downstream 100 bases:
>100_bases GCCAACACTAATCCTTGAAGATTATGATTAGTGTTTGAAGTAATTTTTATCTATACTATTTACGTTGTGACTAAGCTGAC TGGTCTTATTGGCCTTGCTG
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSKSALPKRLIEIPEMRRIKSIHFIGVGGAGMCGIAEVMKNQGYGVSGSDIKESPVTKRLQSLGIEVFIGHDSKNIANAD VVVVSSAIDRENPEIQAALKAQLPVVRRADMLGELMRYRHGIAVAGAHGKTTTTSLLTMMMTEAGFDPTYVIGGKLNASG KNASLGESRYLIAEADESDASFLTLHPMAAIVTNIDQDHMDTYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELFDMI DDIGRPVLTFGLEPHNNVQATNVRVDGTKTHFTVLRKDREPLELTLNIPGQHNVLNALAAITMATDEGVNDDAIKRALAK FAGVGRRFEQQACVAKDDGDVLLIDDYGHHPVEVAATIKAARASYPERRLVMLFQPHRYSRTRDCYDDFVAVLSQVDVLL LLDVYSAGEAPIVGADTKSLARSIRLRGEVEPVVVDKDELAPVMQRVLQAGDMLITQGAGNVGQLSQQLAANNLYL
Sequences:
>Translated_476_residues MSKSALPKRLIEIPEMRRIKSIHFIGVGGAGMCGIAEVMKNQGYGVSGSDIKESPVTKRLQSLGIEVFIGHDSKNIANAD VVVVSSAIDRENPEIQAALKAQLPVVRRADMLGELMRYRHGIAVAGAHGKTTTTSLLTMMMTEAGFDPTYVIGGKLNASG KNASLGESRYLIAEADESDASFLTLHPMAAIVTNIDQDHMDTYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELFDMI DDIGRPVLTFGLEPHNNVQATNVRVDGTKTHFTVLRKDREPLELTLNIPGQHNVLNALAAITMATDEGVNDDAIKRALAK FAGVGRRFEQQACVAKDDGDVLLIDDYGHHPVEVAATIKAARASYPERRLVMLFQPHRYSRTRDCYDDFVAVLSQVDVLL LLDVYSAGEAPIVGADTKSLARSIRLRGEVEPVVVDKDELAPVMQRVLQAGDMLITQGAGNVGQLSQQLAANNLYL >Mature_475_residues SKSALPKRLIEIPEMRRIKSIHFIGVGGAGMCGIAEVMKNQGYGVSGSDIKESPVTKRLQSLGIEVFIGHDSKNIANADV VVVSSAIDRENPEIQAALKAQLPVVRRADMLGELMRYRHGIAVAGAHGKTTTTSLLTMMMTEAGFDPTYVIGGKLNASGK NASLGESRYLIAEADESDASFLTLHPMAAIVTNIDQDHMDTYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELFDMID DIGRPVLTFGLEPHNNVQATNVRVDGTKTHFTVLRKDREPLELTLNIPGQHNVLNALAAITMATDEGVNDDAIKRALAKF AGVGRRFEQQACVAKDDGDVLLIDDYGHHPVEVAATIKAARASYPERRLVMLFQPHRYSRTRDCYDDFVAVLSQVDVLLL LDVYSAGEAPIVGADTKSLARSIRLRGEVEPVVVDKDELAPVMQRVLQAGDMLITQGAGNVGQLSQQLAANNLYL
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=476, Percent_Identity=54.4117647058823, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1790680, Length=468, Percent_Identity=28.2051282051282, Blast_Score=164, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_PSYWF (A5WCT9)
Other databases:
- EMBL: CP000713 - RefSeq: YP_001279430.1 - ProteinModelPortal: A5WCT9 - SMR: A5WCT9 - STRING: A5WCT9 - GeneID: 5205496 - GenomeReviews: CP000713_GR - KEGG: prw:PsycPRwf_0525 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - BioCyc: PSP56811:PSYCPRWF_0525-MONOMER - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 51793; Mature: 51662
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSALPKRLIEIPEMRRIKSIHFIGVGGAGMCGIAEVMKNQGYGVSGSDIKESPVTKRL CCCCHHHHHHHCCCHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QSLGIEVFIGHDSKNIANADVVVVSSAIDRENPEIQAALKAQLPVVRRADMLGELMRYRH HHCCEEEEEECCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC GIAVAGAHGKTTTTSLLTMMMTEAGFDPTYVIGGKLNASGKNASLGESRYLIAEADESDA CEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCEEEEEECCCCCC SFLTLHPMAAIVTNIDQDHMDTYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELFDMI CEEEECHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH DDIGRPVLTFGLEPHNNVQATNVRVDGTKTHFTVLRKDREPLELTLNIPGQHNVLNALAA HHCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHH ITMATDEGVNDDAIKRALAKFAGVGRRFEQQACVAKDDGDVLLIDDYGHHPVEVAATIKA HHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH ARASYPERRLVMLFQPHRYSRTRDCYDDFVAVLSQVDVLLLLDVYSAGEAPIVGADTKSL HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCCCEECCCHHHH ARSIRLRGEVEPVVVDKDELAPVMQRVLQAGDMLITQGAGNVGQLSQQLAANNLYL HHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SKSALPKRLIEIPEMRRIKSIHFIGVGGAGMCGIAEVMKNQGYGVSGSDIKESPVTKRL CCCHHHHHHHCCCHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QSLGIEVFIGHDSKNIANADVVVVSSAIDRENPEIQAALKAQLPVVRRADMLGELMRYRH HHCCEEEEEECCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC GIAVAGAHGKTTTTSLLTMMMTEAGFDPTYVIGGKLNASGKNASLGESRYLIAEADESDA CEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCEEEEEECCCCCC SFLTLHPMAAIVTNIDQDHMDTYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELFDMI CEEEECHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH DDIGRPVLTFGLEPHNNVQATNVRVDGTKTHFTVLRKDREPLELTLNIPGQHNVLNALAA HHCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHH ITMATDEGVNDDAIKRALAKFAGVGRRFEQQACVAKDDGDVLLIDDYGHHPVEVAATIKA HHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH ARASYPERRLVMLFQPHRYSRTRDCYDDFVAVLSQVDVLLLLDVYSAGEAPIVGADTKSL HHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCCCEECCCHHHH ARSIRLRGEVEPVVVDKDELAPVMQRVLQAGDMLITQGAGNVGQLSQQLAANNLYL HHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA