| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is pyrE [H]
Identifier: 148652333
GI number: 148652333
Start: 623311
End: 623985
Strand: Direct
Name: pyrE [H]
Synonym: PsycPRwf_0521
Alternate gene names: 148652333
Gene position: 623311-623985 (Clockwise)
Preceding gene: 148652332
Following gene: 148652334
Centisome position: 20.92
GC content: 44.74
Gene sequence:
>675_bases ATGGCAGTTTCTCCTTCTATTTCTAATTTTTCTAGCAGTGCTTTTATTGAGCTTGCTTTGTCTAATGAAGTGTTAAAGTT TGGTGAATATGTGCTTAAATCAGGCCGTATTAGTCCTTATTTCTTTAATGCAGGTTTACTGTCCACAGGAGAGATGTTGT CATTATTGGCCAATGGTTATGCCGAAGCTTTAGCTCAGCAAGTAAAGGTGTCGGGTAGCGATGAGCTGGTTATCTTTGGC GCCGCTTATAAAGGCATTCCTTTTGTGGCAGCCACTGCACAAGCCCTATGGAATAATCATGGCATTAACGCACACTGGGG TTACAATCGTAAAGAGGCCAAAGATCATGGTGAAGGCGGCAACTTAGTGGGTGCAGATGTGAATGGCAAAGCGGTATGGG TGCTAGATGATGTCATCACTGCTGGCACAGCAATGCGAGAGGTTGTCGATATTTTGGATGCTGCCGGTGCCACAGTGGCC GGTATTCTTGTGGCGCTTGATCGCAAAGAGCGTGGCCAAAATGAGCAATCTGCGATTCAAGAGCTGGCAGAGAACTTAAA AGTTCCTGTACAAGCTTTGGTTAATATAGATGATATTATTGATTATGTGGCCAAAAAGGGTGAGGAAACGCAGTTGGCCA AAATGCGTCATTACCGTGAGCAGTACGGCGTATAA
Upstream 100 bases:
>100_bases ACAGGTTTTTGGCCTATCTTTTACCAAGCTTTAGCCTAAGTTTGGTTGGTGGCTTGATATAACGTCACTTTACTTTTTAT TTATTTAAATAGGACTTTTC
Downstream 100 bases:
>100_bases ATGGAGTGGGGCTTAAGTCAGCTAAACTTGTAAAAATGAAGCCTAGCCATCACCCTAACTATAATCATCTTATCTTTGTC AGTTGCTGACAGTCATAACG
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAVSPSISNFSSSAFIELALSNEVLKFGEYVLKSGRISPYFFNAGLLSTGEMLSLLANGYAEALAQQVKVSGSDELVIFG AAYKGIPFVAATAQALWNNHGINAHWGYNRKEAKDHGEGGNLVGADVNGKAVWVLDDVITAGTAMREVVDILDAAGATVA GILVALDRKERGQNEQSAIQELAENLKVPVQALVNIDDIIDYVAKKGEETQLAKMRHYREQYGV
Sequences:
>Translated_224_residues MAVSPSISNFSSSAFIELALSNEVLKFGEYVLKSGRISPYFFNAGLLSTGEMLSLLANGYAEALAQQVKVSGSDELVIFG AAYKGIPFVAATAQALWNNHGINAHWGYNRKEAKDHGEGGNLVGADVNGKAVWVLDDVITAGTAMREVVDILDAAGATVA GILVALDRKERGQNEQSAIQELAENLKVPVQALVNIDDIIDYVAKKGEETQLAKMRHYREQYGV >Mature_223_residues AVSPSISNFSSSAFIELALSNEVLKFGEYVLKSGRISPYFFNAGLLSTGEMLSLLANGYAEALAQQVKVSGSDELVIFGA AYKGIPFVAATAQALWNNHGINAHWGYNRKEAKDHGEGGNLVGADVNGKAVWVLDDVITAGTAMREVVDILDAAGATVAG ILVALDRKERGQNEQSAIQELAENLKVPVQALVNIDDIIDYVAKKGEETQLAKMRHYREQYGV
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=157, Percent_Identity=29.2993630573248, Blast_Score=68, Evalue=5e-12, Organism=Escherichia coli, GI1790073, Length=211, Percent_Identity=53.5545023696682, Blast_Score=220, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6323530, Length=216, Percent_Identity=42.1296296296296, Blast_Score=162, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323927, Length=219, Percent_Identity=39.2694063926941, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 24059; Mature: 23928
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSPSISNFSSSAFIELALSNEVLKFGEYVLKSGRISPYFFNAGLLSTGEMLSLLANGY CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH AEALAQQVKVSGSDELVIFGAAYKGIPFVAATAQALWNNHGINAHWGYNRKEAKDHGEGG HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC NLVGADVNGKAVWVLDDVITAGTAMREVVDILDAAGATVAGILVALDRKERGQNEQSAIQ CEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCHHHHHH ELAENLKVPVQALVNIDDIIDYVAKKGEETQLAKMRHYREQYGV HHHHHCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AVSPSISNFSSSAFIELALSNEVLKFGEYVLKSGRISPYFFNAGLLSTGEMLSLLANGY CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH AEALAQQVKVSGSDELVIFGAAYKGIPFVAATAQALWNNHGINAHWGYNRKEAKDHGEGG HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC NLVGADVNGKAVWVLDDVITAGTAMREVVDILDAAGATVAGILVALDRKERGQNEQSAIQ CEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCHHHHHH ELAENLKVPVQALVNIDDIIDYVAKKGEETQLAKMRHYREQYGV HHHHHCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA