Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148652325

Identifier: 148652325

GI number: 148652325

Start: 611553

End: 613565

Strand: Direct

Name: 148652325

Synonym: PsycPRwf_0513

Alternate gene names: NA

Gene position: 611553-613565 (Clockwise)

Preceding gene: 148652323

Following gene: 148652326

Centisome position: 20.53

GC content: 47.09

Gene sequence:

>2013_bases
ATGTTATCAGACAAATCGGCTGTAGGTTCTTGGGCTCAAAGCACACCCTTATTAAGCCTAAAAAATAGTGTCACTCATGT
GGCAGTGACCAGTATCTTGGTAAGCTTAAGCGCGTCCGCTTATGCCCAAGCTCAGCCGCAGCAGACTAAGCATAACAAGG
ACATCGCAAAGATGCCTATAACGCAGTCTGCTAAAATGACGGCAGAACAAGCCGGTAGCTTAGAGCAACAAAAGCAGATA
GATCAATTGATTGCCACAGCAAAGCAAAAAAATCTGGCCACCCATCCCAGCTGGCTGCGACTGCATTATTTTGAACCAAA
TGGCCATACAAAAAGTGGCTCAGCACGCTATAAAAGCAAAATCACTAACCCAGAATTTTTTCTAAGCCCTGCAGGTCACA
CTGATCCGCAGGCTGAGTTAGAGGCCTTTATCACTGCCACAATCACTCAAGGTATAAAGGGCAATGACAGTGTGGCCTGT
AGGTTTCCGGCGCGTACTCATTGGCTCAAGACTCGGCTTGGCCTTGAAAACATTCAGCCCGACTGTCCCGACTTTGATAA
TTGGCTTCAAGCATTAGACCCACAGCGCTTATCTGTAGTATTCGCTGAAGAATATCCCAACCGTCCGGTATCCGCTTTTG
GTCATACCTTGATGCTCATTGATTCTAAGGCCAGCTTGGCTGATCCCAAAGCCATTGATAAAGCGCATGCACTAAATGAT
ACCGTGGCCGGCAATCCTGATGATTCATTTCTCGTCTATGCAGCCAAATCTGCCGCTGGTGGTTATCCTAATGACATTAC
TATTGAGCCCTACCCACAAAAGCTTGCTGACTATCTAAAGACCGACAACCGTGACGTTTGGACCTATGAGCTTAAGCTAA
CAGATGCTGAAATTCAGCAAATTATGCGTCATGTTTATGAGACCAAAGACTTAGAACTGCCTTATTATTTTACTTTAGAT
AACTGCGCCTCAGAGATTCTACGCTATATTGATGTGGTACGCCCTGAAGGCAACTTATTAGATGAATTTAAGCTGGCAGT
GGTGCCCTCTGATGTGGTTCGATTGCTTAAAAAACAAGGCTTGATAACGGATCAAAGCTATTTTCCTGCAGACAAAACAT
TGGCACAGGCCAAACGCAATAACCCCCAAATAGAATTGCCCAAAAGCAGCATTGATGCGAATAATCGCCAGGTCCCCACT
CAATTAACCCCTGCTGATAATAACCCGCTAAATGGACATGAACTACAGCGCGTGATGATCGGTGCAGGTGCGCAAGATGA
CACAGGCTATCTGAGCTTGGCCTATCGCGGCGGATTTAATGACTTATTGGATCGGCCCAGTGGCTATCCAAAAAATTTTC
ATTTAGAAGCAGGTTCTATTGCGCTTAGAGTGTATCAAGACCAAGAGCCACACAAAGGCGATCATAACCGAGTGGAGTTA
CAAGAGTTGGCCATTTTGCGTGGCCGCTCATTTAACCCGATCAATACCGCCCGCAGCGGCGACTCTAAGTTGTCAAGCTG
GGGAGTTAACTTGCAAGCTACGCAAGTAAAAGATGGCTCTCAAGCCAAATTAGCGACTCATGACGATCCCGACGCCAGCC
ATCTGGTGGGCAGCTTTGCTTACGAGAAAGGGATATCTGCCGCCTTTGGGACACCAACAGCGGGCTCAGGTAAGCTACCG
CCGCAATTGTGCTATGCCTTTGGCTCCGGCTTAGCACAAGTGGGTAAAGGCTTAAGTCATGGCTACCGAGTGGGAGCAGG
CGTGAATTTGGGCTGCCGCTATCAGCTCAATAGCAAGGCTAGGGTGGTGGGGGAGCTACAAATGCCATATTGGTATCACG
GCGACTTAGATTCAGACAATCGTAGAAGTCATTATTGGCAGCCAATAGTTAGCTTAGGGGCACAGTATGATTTGGCGAAG
AACCAAGCGATTCGCCTGCAAGGCAGTTATCAGCTGCAAGATGATATTGAGGGCAGAGACGATATACAACTGGCGTATAT
CAAGCATTTTTAA

Upstream 100 bases:

>100_bases
GCTATCAATGGCTTTAAATCAGCGGCATGGTATCATAAACCCATTAGGCGGCAATCGATTAAGCTGCTTTATTATACTTA
AATTAATAATAGGGTGAATC

Downstream 100 bases:

>100_bases
CACTTAAATACTGAGCATAGCAGTATGGATGTCACTTTATGGAAGCGGCCTAATGATCAATCCTACCTCACCCTCGAGTG
CCATGCCGATATCGCATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI
DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC
RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND
TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD
NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT
QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL
QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP
PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK
NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF

Sequences:

>Translated_670_residues
MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI
DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC
RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND
TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD
NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT
QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL
QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP
PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK
NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF
>Mature_670_residues
MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI
DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC
RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND
TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD
NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT
QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL
QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP
PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK
NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74019; Mature: 74019

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPI
CCCCCCHHCCHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC
TQSAKMTAEQAGSLEQQKQIDQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSK
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHC
ITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVACRFPARTHWLKTRLGLENIQP
CCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCHHHCCC
DCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND
CCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHCCC
TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQ
CCCCCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEECHHHHHH
IMRHVYETKDLELPYYFTLDNCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQG
HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCC
LITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPTQLTPADNNPLNGHELQRVMI
CCCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHEE
GAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL
ECCCCCCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEHH
QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFA
HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHH
YEKGISAAFGTPTAGSGKLPPQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCEEECCCCCCEEEEEECCCE
RVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAKNQAIRLQGSYQLQDDIEGRD
EEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCCC
DIQLAYIKHF
CEEEEEEECC
>Mature Secondary Structure
MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPI
CCCCCCHHCCHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC
TQSAKMTAEQAGSLEQQKQIDQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSK
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHC
ITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVACRFPARTHWLKTRLGLENIQP
CCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCHHHCCC
DCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND
CCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHCCC
TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQ
CCCCCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEECHHHHHH
IMRHVYETKDLELPYYFTLDNCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQG
HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCC
LITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPTQLTPADNNPLNGHELQRVMI
CCCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHEE
GAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL
ECCCCCCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEHH
QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFA
HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHH
YEKGISAAFGTPTAGSGKLPPQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCEEECCCCCCEEEEEECCCE
RVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAKNQAIRLQGSYQLQDDIEGRD
EEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCCC
DIQLAYIKHF
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA