| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652325
Identifier: 148652325
GI number: 148652325
Start: 611553
End: 613565
Strand: Direct
Name: 148652325
Synonym: PsycPRwf_0513
Alternate gene names: NA
Gene position: 611553-613565 (Clockwise)
Preceding gene: 148652323
Following gene: 148652326
Centisome position: 20.53
GC content: 47.09
Gene sequence:
>2013_bases ATGTTATCAGACAAATCGGCTGTAGGTTCTTGGGCTCAAAGCACACCCTTATTAAGCCTAAAAAATAGTGTCACTCATGT GGCAGTGACCAGTATCTTGGTAAGCTTAAGCGCGTCCGCTTATGCCCAAGCTCAGCCGCAGCAGACTAAGCATAACAAGG ACATCGCAAAGATGCCTATAACGCAGTCTGCTAAAATGACGGCAGAACAAGCCGGTAGCTTAGAGCAACAAAAGCAGATA GATCAATTGATTGCCACAGCAAAGCAAAAAAATCTGGCCACCCATCCCAGCTGGCTGCGACTGCATTATTTTGAACCAAA TGGCCATACAAAAAGTGGCTCAGCACGCTATAAAAGCAAAATCACTAACCCAGAATTTTTTCTAAGCCCTGCAGGTCACA CTGATCCGCAGGCTGAGTTAGAGGCCTTTATCACTGCCACAATCACTCAAGGTATAAAGGGCAATGACAGTGTGGCCTGT AGGTTTCCGGCGCGTACTCATTGGCTCAAGACTCGGCTTGGCCTTGAAAACATTCAGCCCGACTGTCCCGACTTTGATAA TTGGCTTCAAGCATTAGACCCACAGCGCTTATCTGTAGTATTCGCTGAAGAATATCCCAACCGTCCGGTATCCGCTTTTG GTCATACCTTGATGCTCATTGATTCTAAGGCCAGCTTGGCTGATCCCAAAGCCATTGATAAAGCGCATGCACTAAATGAT ACCGTGGCCGGCAATCCTGATGATTCATTTCTCGTCTATGCAGCCAAATCTGCCGCTGGTGGTTATCCTAATGACATTAC TATTGAGCCCTACCCACAAAAGCTTGCTGACTATCTAAAGACCGACAACCGTGACGTTTGGACCTATGAGCTTAAGCTAA CAGATGCTGAAATTCAGCAAATTATGCGTCATGTTTATGAGACCAAAGACTTAGAACTGCCTTATTATTTTACTTTAGAT AACTGCGCCTCAGAGATTCTACGCTATATTGATGTGGTACGCCCTGAAGGCAACTTATTAGATGAATTTAAGCTGGCAGT GGTGCCCTCTGATGTGGTTCGATTGCTTAAAAAACAAGGCTTGATAACGGATCAAAGCTATTTTCCTGCAGACAAAACAT TGGCACAGGCCAAACGCAATAACCCCCAAATAGAATTGCCCAAAAGCAGCATTGATGCGAATAATCGCCAGGTCCCCACT CAATTAACCCCTGCTGATAATAACCCGCTAAATGGACATGAACTACAGCGCGTGATGATCGGTGCAGGTGCGCAAGATGA CACAGGCTATCTGAGCTTGGCCTATCGCGGCGGATTTAATGACTTATTGGATCGGCCCAGTGGCTATCCAAAAAATTTTC ATTTAGAAGCAGGTTCTATTGCGCTTAGAGTGTATCAAGACCAAGAGCCACACAAAGGCGATCATAACCGAGTGGAGTTA CAAGAGTTGGCCATTTTGCGTGGCCGCTCATTTAACCCGATCAATACCGCCCGCAGCGGCGACTCTAAGTTGTCAAGCTG GGGAGTTAACTTGCAAGCTACGCAAGTAAAAGATGGCTCTCAAGCCAAATTAGCGACTCATGACGATCCCGACGCCAGCC ATCTGGTGGGCAGCTTTGCTTACGAGAAAGGGATATCTGCCGCCTTTGGGACACCAACAGCGGGCTCAGGTAAGCTACCG CCGCAATTGTGCTATGCCTTTGGCTCCGGCTTAGCACAAGTGGGTAAAGGCTTAAGTCATGGCTACCGAGTGGGAGCAGG CGTGAATTTGGGCTGCCGCTATCAGCTCAATAGCAAGGCTAGGGTGGTGGGGGAGCTACAAATGCCATATTGGTATCACG GCGACTTAGATTCAGACAATCGTAGAAGTCATTATTGGCAGCCAATAGTTAGCTTAGGGGCACAGTATGATTTGGCGAAG AACCAAGCGATTCGCCTGCAAGGCAGTTATCAGCTGCAAGATGATATTGAGGGCAGAGACGATATACAACTGGCGTATAT CAAGCATTTTTAA
Upstream 100 bases:
>100_bases GCTATCAATGGCTTTAAATCAGCGGCATGGTATCATAAACCCATTAGGCGGCAATCGATTAAGCTGCTTTATTATACTTA AATTAATAATAGGGTGAATC
Downstream 100 bases:
>100_bases CACTTAAATACTGAGCATAGCAGTATGGATGTCACTTTATGGAAGCGGCCTAATGATCAATCCTACCTCACCCTCGAGTG CCATGCCGATATCGCATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF
Sequences:
>Translated_670_residues MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF >Mature_670_residues MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPITQSAKMTAEQAGSLEQQKQI DQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSKITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVAC RFPARTHWLKTRLGLENIQPDCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQIMRHVYETKDLELPYYFTLD NCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQGLITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPT QLTPADNNPLNGHELQRVMIGAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFAYEKGISAAFGTPTAGSGKLP PQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKARVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAK NQAIRLQGSYQLQDDIEGRDDIQLAYIKHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74019; Mature: 74019
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPI CCCCCCHHCCHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC TQSAKMTAEQAGSLEQQKQIDQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSK CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHC ITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVACRFPARTHWLKTRLGLENIQP CCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCHHHCCC DCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND CCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHCCC TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQ CCCCCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEECHHHHHH IMRHVYETKDLELPYYFTLDNCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQG HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCC LITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPTQLTPADNNPLNGHELQRVMI CCCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHEE GAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL ECCCCCCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEHH QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFA HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHH YEKGISAAFGTPTAGSGKLPPQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKA HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCEEECCCCCCEEEEEECCCE RVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAKNQAIRLQGSYQLQDDIEGRD EEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCCC DIQLAYIKHF CEEEEEEECC >Mature Secondary Structure MLSDKSAVGSWAQSTPLLSLKNSVTHVAVTSILVSLSASAYAQAQPQQTKHNKDIAKMPI CCCCCCHHCCHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC TQSAKMTAEQAGSLEQQKQIDQLIATAKQKNLATHPSWLRLHYFEPNGHTKSGSARYKSK CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHC ITNPEFFLSPAGHTDPQAELEAFITATITQGIKGNDSVACRFPARTHWLKTRLGLENIQP CCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCHHHCCC DCPDFDNWLQALDPQRLSVVFAEEYPNRPVSAFGHTLMLIDSKASLADPKAIDKAHALND CCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHCCC TVAGNPDDSFLVYAAKSAAGGYPNDITIEPYPQKLADYLKTDNRDVWTYELKLTDAEIQQ CCCCCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEECHHHHHH IMRHVYETKDLELPYYFTLDNCASEILRYIDVVRPEGNLLDEFKLAVVPSDVVRLLKKQG HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCC LITDQSYFPADKTLAQAKRNNPQIELPKSSIDANNRQVPTQLTPADNNPLNGHELQRVMI CCCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHEE GAGAQDDTGYLSLAYRGGFNDLLDRPSGYPKNFHLEAGSIALRVYQDQEPHKGDHNRVEL ECCCCCCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEHH QELAILRGRSFNPINTARSGDSKLSSWGVNLQATQVKDGSQAKLATHDDPDASHLVGSFA HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHH YEKGISAAFGTPTAGSGKLPPQLCYAFGSGLAQVGKGLSHGYRVGAGVNLGCRYQLNSKA HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCEEECCCCCCEEEEEECCCE RVVGELQMPYWYHGDLDSDNRRSHYWQPIVSLGAQYDLAKNQAIRLQGSYQLQDDIEGRD EEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCCC DIQLAYIKHF CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA