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The map label for this gene is pilQ [H]

Identifier: 148652211

GI number: 148652211

Start: 485000

End: 486928

Strand: Direct

Name: pilQ [H]

Synonym: PsycPRwf_0399

Alternate gene names: 148652211

Gene position: 485000-486928 (Clockwise)

Preceding gene: 148652210

Following gene: 148652212

Centisome position: 16.28

GC content: 46.14

Gene sequence:

>1929_bases
ATGATGTTTTTTAGGCCTGAGGTTTATCAGCTACGGCTCAAATTTAGGGCAATGCAAGCGCTCACACTGGCGGTGACTAC
CAGTCTTAGCAGCCAAGTACCAGCGGCAACTTCTGCACTCATCAATGTGCAAGAGCAGCCAGATACTGTCACTGCTAAAG
CGTTCAACTCTTTTGCCGCGCCTTATCAGATTGACTATCAGCGCCTGTCTGAAAATCAAGAGATGCTGCAGATTGCATTA
GATAATCCGGACACCCAGATTGAGATTAAGCGCCAAGGCAATACATTACTAGTGCGCTTAAAAGGGGTGACAGCCTCATC
AGTACACGGGTCAATGCCTGTACTTGGCCAGAAGCTCACTGGGTTATTACAACGTATTGAGGCCGAGCAGCGCGGTAAAG
ACACTTGGCTTATCTTCACGGTATCCAAAGATTTTGAGTATCAAAGCTATCAATTAGATAATCTCATTAAAATCCAGATT
CAGCCGGTCAGAGCAATTCAACAAAATACTGTCACCCCAAAAATATATAGCGGCAAACCCATTTCGGTGGACTTCCAACA
GGTTGAGGTGCGCAGCGTGCTGCATCTGTTATCTCAATTTACCGATACCAATATTGTCGCCACTGATCAAGTAACAGGCA
GCTTAATGCTCAATTTGGTCAATGTGCCTTGGGATCAGGCGTTAGATATTATCCTTACCAGTCAGCAGCTGGGCAAACAA
ACCCAAGGTAATGTAATTTTGGTTGCGCCACTGGCACAGATGGCCAAACAGCGGGCCCAGCAGTTAGCCATTGAGCAGCA
GTCTCAAGCACTGATGCCACTGCGCAGTGAGTATATTCGGCTTAATTATGCCAAGGCAGAAGACCTACAAGCCTTGATTA
TTAAAGCCAGTGGCAGCCCTACACCTACCCCTGTGGCCATGCAACATCTACCGGCTTCAACGGCCGTCGCCAATGCACCC
TCAGCGTTACCTGCTGTAGTAACACGCTTGAACTTGCCTGTCAGTAGCCGCTTGCTATCGAGCCGAGGGGTGATTGCAGT
AGATGCGCGTACCAATACTTTAATTATCAAAGATACCGCTGATAGCCTGTCCAATATTCACGCTTTGATTAAGCAGATAG
ATATCCCAGTGCGTCAGGTAATGATTGAGGTCAGAATGGTTAGTGCCACCGACAACTTTAGCAAAGAGATGGGGGTTAAA
TGGGGGTTGTTATCAAAAGGAGTGGCGCACAATGATGATCTGTTAGTGGGCGCAAGTGATCAAACTTTGGCTGATTTAAA
AAGCTTTAGTGCTCCAAATACTGCTTATAAAGGCCGTAATAAAAGTCGAGCGGGATACGCTATTACTCGCCCAGACAATC
TTAATGTCGACTTAGGGATTAGCAATCCGGCCGGACGTATTGCATTTGGTCTACTTAGCATGTCAGATTTGATGATTGAT
TTGGAATTATCGGCGATGCAGGCTGAAGGCCGTGGCGAAGTTATCTCTACCCCTAAGATACTGACTTTGGACAAACAAAC
GGCCACTGTATCTTCTGGAACCAAAATCCCTTATCAAAGTGAGTCAGAAGGCGGTGGTACCACCACTCAGTTTGAGGAGG
CCTTATTGAGCCTACAGGTCACGCCTAGTATCACGCCAGAAGACAAAATATCATTACAATTAAATATCGAAAATGGCCGG
CCCAATCCTGTCGGCAATGGGGTGATATTGATAGATACAGACCGATTAATCACCAGAGTAACTGTCGGTGATGGTCAAAC
TCTGGTACTGGGCGGTATTTATCGCAATCAGATTTTTAATAATACCCAAAAGGTGCCTTTTTTTGGTGACTTGCCTTATA
TAGGCCGCTTATTTAAACAAGACTTGCGCCGTAATGACCAACAAGAGCTGCTTATCTTTGTCACCCCTAAGCTGATGCAG
CTGCCCTAA

Upstream 100 bases:

>100_bases
AAGCGCAGAGTCAGTCTAATCGCCCCCTTTTAGCTAGATACAAAAGCACAATCTTGCTTTGAGCGTCACTTTTTATTATG
CCCTTTATTAGGAACAGCAC

Downstream 100 bases:

>100_bases
TATCAATGTAGTATCGATTTAGTATCGACCGGCCGCCATAAACATAAAGGAACATAAAGGAGCTGAATAAAACTGGCTGT
GTTAAAGCAGTAAGGCTTTT

Product: type IV pilus secretin PilQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MMFFRPEVYQLRLKFRAMQALTLAVTTSLSSQVPAATSALINVQEQPDTVTAKAFNSFAAPYQIDYQRLSENQEMLQIAL
DNPDTQIEIKRQGNTLLVRLKGVTASSVHGSMPVLGQKLTGLLQRIEAEQRGKDTWLIFTVSKDFEYQSYQLDNLIKIQI
QPVRAIQQNTVTPKIYSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQ
TQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSPTPTPVAMQHLPASTAVANAP
SALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVK
WGLLSKGVAHNDDLLVGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMID
LELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGGTTTQFEEALLSLQVTPSITPEDKISLQLNIENGR
PNPVGNGVILIDTDRLITRVTVGDGQTLVLGGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQ
LP

Sequences:

>Translated_642_residues
MMFFRPEVYQLRLKFRAMQALTLAVTTSLSSQVPAATSALINVQEQPDTVTAKAFNSFAAPYQIDYQRLSENQEMLQIAL
DNPDTQIEIKRQGNTLLVRLKGVTASSVHGSMPVLGQKLTGLLQRIEAEQRGKDTWLIFTVSKDFEYQSYQLDNLIKIQI
QPVRAIQQNTVTPKIYSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQ
TQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSPTPTPVAMQHLPASTAVANAP
SALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVK
WGLLSKGVAHNDDLLVGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMID
LELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGGTTTQFEEALLSLQVTPSITPEDKISLQLNIENGR
PNPVGNGVILIDTDRLITRVTVGDGQTLVLGGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQ
LP
>Mature_642_residues
MMFFRPEVYQLRLKFRAMQALTLAVTTSLSSQVPAATSALINVQEQPDTVTAKAFNSFAAPYQIDYQRLSENQEMLQIAL
DNPDTQIEIKRQGNTLLVRLKGVTASSVHGSMPVLGQKLTGLLQRIEAEQRGKDTWLIFTVSKDFEYQSYQLDNLIKIQI
QPVRAIQQNTVTPKIYSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQ
TQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSPTPTPVAMQHLPASTAVANAP
SALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVK
WGLLSKGVAHNDDLLVGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMID
LELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGGTTTQFEEALLSLQVTPSITPEDKISLQLNIENGR
PNPVGNGVILIDTDRLITRVTVGDGQTLVLGGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQ
LP

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=474, Percent_Identity=29.1139240506329, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI87082242, Length=311, Percent_Identity=24.1157556270096, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 70440; Mature: 70440

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFFRPEVYQLRLKFRAMQALTLAVTTSLSSQVPAATSALINVQEQPDTVTAKAFNSFAA
CCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHEEEECCCCCEEEHHHHHCCCC
PYQIDYQRLSENQEMLQIALDNPDTQIEIKRQGNTLLVRLKGVTASSVHGSMPVLGQKLT
CEEEEHHHHCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCEECCCCCCCCHHHHHHH
GLLQRIEAEQRGKDTWLIFTVSKDFEYQSYQLDNLIKIQIQPVRAIQQNTVTPKIYSGKP
HHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCEEEEEEEEHHHHHHCCCCCEEECCCC
ISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQ
CEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHEEEEECHHHCCC
TQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSP
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCC
TPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTA
CCCCHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCEEEEEECH
DSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAHNDDLLVGASD
HHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCHHHHCCEECHHCCCCCCCCCEEEECCC
QTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMID
CHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEEEE
LELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGGTTTQFEEALLSLQV
EEEEEECCCCCCCEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEE
TPSITPEDKISLQLNIENGRPNPVGNGVILIDTDRLITRVTVGDGQTLVLGGIYRNQIFN
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEECHHHHHHHC
NTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQLP
CCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHCCC
>Mature Secondary Structure
MMFFRPEVYQLRLKFRAMQALTLAVTTSLSSQVPAATSALINVQEQPDTVTAKAFNSFAA
CCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHEEEECCCCCEEEHHHHHCCCC
PYQIDYQRLSENQEMLQIALDNPDTQIEIKRQGNTLLVRLKGVTASSVHGSMPVLGQKLT
CEEEEHHHHCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCEECCCCCCCCHHHHHHH
GLLQRIEAEQRGKDTWLIFTVSKDFEYQSYQLDNLIKIQIQPVRAIQQNTVTPKIYSGKP
HHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCEEEEEEEEHHHHHHCCCCCEEECCCC
ISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQ
CEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHEEEEECHHHCCC
TQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSP
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCC
TPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTA
CCCCHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCEEEEEECH
DSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAHNDDLLVGASD
HHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCHHHHCCEECHHCCCCCCCCCEEEECCC
QTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMID
CHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEEEE
LELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGGTTTQFEEALLSLQV
EEEEEECCCCCCCEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEE
TPSITPEDKISLQLNIENGRPNPVGNGVILIDTDRLITRVTVGDGQTLVLGGIYRNQIFN
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEECHHHHHHHC
NTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQLP
CCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]