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The map label for this gene is recO [H]

Identifier: 148652188

GI number: 148652188

Start: 451091

End: 451798

Strand: Direct

Name: recO [H]

Synonym: PsycPRwf_0376

Alternate gene names: 148652188

Gene position: 451091-451798 (Clockwise)

Preceding gene: 148652187

Following gene: 148652189

Centisome position: 15.14

GC content: 45.2

Gene sequence:

>708_bases
ATGCGTAATGAACCCCTACAAGCGTATAGCTTACATCAGCGGCCCTTTCAAGAAAAACGCAGCATTTATTATCTGTTGAC
AAAAGAGCATGGTGTTTTGCATGGGGTGGCCAAAAAGGGCATCCCGCAGTTTGTGCCTTTAACGCTCTTTGCTAGCGGAA
AAAAATCCTTAAAAACCCTGCAGCAAGTACACATTGCTGAGTCTGTGCCAAGTCTCATGGGTCAGCAGCAATATGCTGCT
TTGTATGTGAATGAGATTACCCTTAAGCTCTTGCCCGTTGAAGACAGTGTACCGATTATTTATGAGCAATATAGCCAGAC
CATGCGGCAATTACAGGGTGTACTCAGTAGAGATGACTTAAAGATGGTGCTGCGCGCCTACGAGCAGGTTTTATTTAATG
AGCTAGGCTTTGCCATTGATTTGGATCAAGACTGTGATCAATACCCCATTGAGGCTGAGCCGCTATACCGTTTTGCCCCA
GACAGGGGGTGGGTCAAGCAGCTTGAGTCTGATGAAAAATTAGACTGCGCTCATATCAAGGCATCATCTGCACTGCTAGG
GCGATCCATTATCGCCATGCGCTCAGGAATAACCACCCATACTGTCAATGATTGGTCACAAATCCATCGCCAATTAATTG
ACCATCTTTTTGACTATCAGCCGCTGCAAAGTCGTATACTTTGGCAGCAGTTTTTTCGTTATCAATAA

Upstream 100 bases:

>100_bases
CTTAGGGTACTAATACTGAGCCTGAGCCAAGTGGCGATCATTATCAAGACAGGTACGTTAAGGGTGTGCTTAGTTAGTCA
GTTTTTTGAGGATGACAGCC

Downstream 100 bases:

>100_bases
GTCACAGTTTCTCATATTGCCTGTACTTGCAAAAGGGTAAGTGTTAGGCAATAAAGGCATATTACAGCCACTTATTGCTT
TTTTTATAGGGTGATATCTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRNEPLQAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGIPQFVPLTLFASGKKSLKTLQQVHIAESVPSLMGQQQYAA
LYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVLSRDDLKMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAP
DRGWVKQLESDEKLDCAHIKASSALLGRSIIAMRSGITTHTVNDWSQIHRQLIDHLFDYQPLQSRILWQQFFRYQ

Sequences:

>Translated_235_residues
MRNEPLQAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGIPQFVPLTLFASGKKSLKTLQQVHIAESVPSLMGQQQYAA
LYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVLSRDDLKMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAP
DRGWVKQLESDEKLDCAHIKASSALLGRSIIAMRSGITTHTVNDWSQIHRQLIDHLFDYQPLQSRILWQQFFRYQ
>Mature_235_residues
MRNEPLQAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGIPQFVPLTLFASGKKSLKTLQQVHIAESVPSLMGQQQYAA
LYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVLSRDDLKMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAP
DRGWVKQLESDEKLDCAHIKASSALLGRSIIAMRSGITTHTVNDWSQIHRQLIDHLFDYQPLQSRILWQQFFRYQ

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=238, Percent_Identity=25.6302521008403, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27311; Mature: 27311

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNEPLQAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGIPQFVPLTLFASGKKSLKTL
CCCCCCHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
QQVHIAESVPSLMGQQQYAALYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVLSRDDL
HHHHHHHHHHHHHCCHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHH
KMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAPDRGWVKQLESDEKLDCAHIK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCHHHHH
ASSALLGRSIIAMRSGITTHTVNDWSQIHRQLIDHLFDYQPLQSRILWQQFFRYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNEPLQAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGIPQFVPLTLFASGKKSLKTL
CCCCCCHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
QQVHIAESVPSLMGQQQYAALYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVLSRDDL
HHHHHHHHHHHHHCCHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHH
KMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAPDRGWVKQLESDEKLDCAHIK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCHHHHH
ASSALLGRSIIAMRSGITTHTVNDWSQIHRQLIDHLFDYQPLQSRILWQQFFRYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA