| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652182
Identifier: 148652182
GI number: 148652182
Start: 443472
End: 444017
Strand: Direct
Name: 148652182
Synonym: PsycPRwf_0370
Alternate gene names: NA
Gene position: 443472-444017 (Clockwise)
Preceding gene: 148652181
Following gene: 148652183
Centisome position: 14.89
GC content: 48.72
Gene sequence:
>546_bases ATGGCTGTTGGGATGTCAGTGCTGACAGGCTGTGCAACGTTATCAGAGCAAGAGTGCCGCACGGGTAATTGGCAGGCTAT CGGTTACGCCGATGGGGCAGCAGGGCGCTCTGCTGATTATTTGAACAATCACAACAAAGCTTGTGCCAAAGCAGGGGTGG CCACAGATTACGAGGCGTGGGCACAGGGCCGAAAAGAGGGTTTGACCCAATATTGTACGGCGACCAAGGCTTACCAAATT GGCCGTAGAGGTGCACAGATGAATGCAGTCTGCCCAGCCAATGTGACCGCCAACTTGGAGCGTATTAATGCCGACGGCCG CCACTATTACTCCTTAAATAAACAGCTGAGTATCGAGGAGGACAGACTGCATAACTATCAAAAAGAGTATGAAAAGCTGC GTGGTGGTGACAATCTTAATTTTGCTACTGAAAAACAAGCGCGTACTTATTTGGTAGAGCTGCCTAATAAGGCAAGTCAG GTCAATCAGCGTATCGAAAATATCAAGCAATCACTGGCGCAGTTACAGCTCAAATATGGTTATTGA
Upstream 100 bases:
>100_bases CATACAAGCCAACACAGCCGGCCGGCAAGGGCATACGCCTTTGTTGGCCGCTTTTATAAGGGAGTAAAATATTGTGAAAA AAGGATATCTACTGCTAAGC
Downstream 100 bases:
>100_bases GACGTATACAGATCAGCCTTTAGTGGACACAAAAAACTCAACAGTTAAAGCAGATTAATTATTTTGTTACATAACTTAAT CAAAATCATGAAGAGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAVGMSVLTGCATLSEQECRTGNWQAIGYADGAAGRSADYLNNHNKACAKAGVATDYEAWAQGRKEGLTQYCTATKAYQI GRRGAQMNAVCPANVTANLERINADGRHYYSLNKQLSIEEDRLHNYQKEYEKLRGGDNLNFATEKQARTYLVELPNKASQ VNQRIENIKQSLAQLQLKYGY
Sequences:
>Translated_181_residues MAVGMSVLTGCATLSEQECRTGNWQAIGYADGAAGRSADYLNNHNKACAKAGVATDYEAWAQGRKEGLTQYCTATKAYQI GRRGAQMNAVCPANVTANLERINADGRHYYSLNKQLSIEEDRLHNYQKEYEKLRGGDNLNFATEKQARTYLVELPNKASQ VNQRIENIKQSLAQLQLKYGY >Mature_180_residues AVGMSVLTGCATLSEQECRTGNWQAIGYADGAAGRSADYLNNHNKACAKAGVATDYEAWAQGRKEGLTQYCTATKAYQIG RRGAQMNAVCPANVTANLERINADGRHYYSLNKQLSIEEDRLHNYQKEYEKLRGGDNLNFATEKQARTYLVELPNKASQV NQRIENIKQSLAQLQLKYGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20137; Mature: 20005
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGMSVLTGCATLSEQECRTGNWQAIGYADGAAGRSADYLNNHNKACAKAGVATDYEAW CCCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHCCCCCCHHHH AQGRKEGLTQYCTATKAYQIGRRGAQMNAVCPANVTANLERINADGRHYYSLNKQLSIEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCH DRLHNYQKEYEKLRGGDNLNFATEKQARTYLVELPNKASQVNQRIENIKQSLAQLQLKYG HHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC Y C >Mature Secondary Structure AVGMSVLTGCATLSEQECRTGNWQAIGYADGAAGRSADYLNNHNKACAKAGVATDYEAW CCCHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHCCCCCCHHHH AQGRKEGLTQYCTATKAYQIGRRGAQMNAVCPANVTANLERINADGRHYYSLNKQLSIEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCH DRLHNYQKEYEKLRGGDNLNFATEKQARTYLVELPNKASQVNQRIENIKQSLAQLQLKYG HHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA