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The map label for this gene is 148643644

Identifier: 148643644

GI number: 148643644

Start: 1629391

End: 1629795

Strand: Reverse

Name: 148643644

Synonym: Msm_1584

Alternate gene names: NA

Gene position: 1629795-1629391 (Counterclockwise)

Preceding gene: 148643652

Following gene: 148643640

Centisome position: 87.95

GC content: 29.88

Gene sequence:

>405_bases
ATGAAAGGAAGCTACTGTCTAATAATCAACATTAAAAAAGATACTGAAATTAAAATCGGCAAAAAATTAGGATTTATCAA
CTTTAAAAAAGGATGTTATGTTTATGTCGGTTCAGCTATGAACTGCCTTGAATCCAGAGTTAAAAGACACCTGTCAGACA
ATAAGAAAAAGCACTGGCATATTGATTACCTTTTATTAAATAAAAACAGCGAAATTGAAAAGGTTTATACAAAAGAGTCT
GATGAAAAACTGGAATGTGAAATAGCTAAAAAAATAATTGAAAATGAGGAATCAATAGCTGATTTCGGCTGCAGTGACTG
CAAATGCCACTCCCATTTAATTTATTTTAAAAACTCAAAATTGGCTAATTTAAAAGTTTCATCCGTTCTCAATAGCTTTG
ATTAA

Upstream 100 bases:

>100_bases
GTTTTTATTAATAAATAAAGTTAATTGAAATATATTTAAAAAAGCATTAAGAAAATAAAAAAAATATATAATAAACTATT
ATTACAAGGTGTAGAAAAAC

Downstream 100 bases:

>100_bases
TTTATGTGCCTCTCTTTCAACTTTTTTACGGTTAAATGCTTTAGCTATTCTTTTTATCGCATCTAAATTTTTAACATAAC
TGTCTAACCATGAAAATATG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKGSYCLIINIKKDTEIKIGKKLGFINFKKGCYVYVGSAMNCLESRVKRHLSDNKKKHWHIDYLLLNKNSEIEKVYTKES
DEKLECEIAKKIIENEESIADFGCSDCKCHSHLIYFKNSKLANLKVSSVLNSFD

Sequences:

>Translated_134_residues
MKGSYCLIINIKKDTEIKIGKKLGFINFKKGCYVYVGSAMNCLESRVKRHLSDNKKKHWHIDYLLLNKNSEIEKVYTKES
DEKLECEIAKKIIENEESIADFGCSDCKCHSHLIYFKNSKLANLKVSSVLNSFD
>Mature_134_residues
MKGSYCLIINIKKDTEIKIGKKLGFINFKKGCYVYVGSAMNCLESRVKRHLSDNKKKHWHIDYLLLNKNSEIEKVYTKES
DEKLECEIAKKIIENEESIADFGCSDCKCHSHLIYFKNSKLANLKVSSVLNSFD

Specific function: Unknown

COG id: COG1833

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR002837
- InterPro:   IPR004036
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR023170
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01986 DUF123; PF00633 HHH; PF00730 HhH-GPD [H]

EC number: NA

Molecular weight: Translated: 15473; Mature: 15473

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSYCLIINIKKDTEIKIGKKLGFINFKKGCYVYVGSAMNCLESRVKRHLSDNKKKHWH
CCCCEEEEEEECCCCEEEECCEECEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCEEE
IDYLLLNKNSEIEKVYTKESDEKLECEIAKKIIENEESIADFGCSDCKCHSHLIYFKNSK
EEEEEECCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEECCC
LANLKVSSVLNSFD
CCEEEHHHHHHCCC
>Mature Secondary Structure
MKGSYCLIINIKKDTEIKIGKKLGFINFKKGCYVYVGSAMNCLESRVKRHLSDNKKKHWH
CCCCEEEEEEECCCCEEEECCEECEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCEEE
IDYLLLNKNSEIEKVYTKESDEKLECEIAKKIIENEESIADFGCSDCKCHSHLIYFKNSK
EEEEEECCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEECCC
LANLKVSSVLNSFD
CCEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]