Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is yfcK [C]

Identifier: 148643615

GI number: 148643615

Start: 1588914

End: 1590137

Strand: Reverse

Name: yfcK [C]

Synonym: Msm_1555

Alternate gene names: 148643615

Gene position: 1590137-1588914 (Counterclockwise)

Preceding gene: 148643625

Following gene: 148643613

Centisome position: 85.81

GC content: 32.35

Gene sequence:

>1224_bases
ATGAGTTATGAAAAAAATGCCAGAGTAATCAATGATGATATTTTTGATTTAGTCAACAGCTGTTTTGAAAAAGAAAGAAG
TAGTGGAAATATTAATTCAAGATGTAATTTTTTTGATGGAAACAAGGATTATTTTGTTTTAACTGATGACGGATCATATT
CCATTAATTCAAAGGAAATAAATCACAAAGTTGAAACACTTCATACATCTACAGGTGCAATAAGTGAATCATTTGAGAAA
TTTATCAAACCTATGAAATTCAACTACGATGAAGATCTAGCTATTTTAGATATCTGTGCAGGACTTGGATACAATTCATC
TGCTGCAATAGCCGATTTTATTAAAAATAGCTCAGATTCCAGTTTACAAATTGATATGGTTGAAATTTCAAAAGCTACTC
TTGCATGCGGTCTTTTAGTTCCCTCACCAATTCCGGAACATGACATTACCAAAAAAGCTATTGAAAATGAATTAATAAAA
CAGGATTATGCCGGCATTAGCTATGAAAAATGCAAAATTCCTGAAAATATTGACATCAATGTTTATATTGAAGATGCAAG
ACAAACTGTTCAAAATTTGGAAGACAACTATTATGATGCAATATTTTTAGACCCATTCAGTCAAAATATGGCTCCTGAAT
TATTTTCTCTGGATTTCTTCAGGGAGTTCAGACGTGTAATTAAAGACAGAGGTATCATAGCTACTTATACTTCTTCTGCA
CCAGTCAGGGCAGGTTTTATAGAAGCTGGATTTTATGTTGGTCAGGGACCTATTTTCGGAAGAAAACAGGGAGGAACCCT
AGCCAGTCCAAATCCAGAAGTTCTTGATAAATCCCTTCCAAAAAACGATGAAATCAGAATAGCTTTATCTGATGTAGGCA
TTCCATTTAGAGACCCTAATCTAAACAACAGCAGTGATTTTATTTTAGATAAACGGGCAGAAGTCAGACATGATGCAAGA
CACAACACCAAAATATCCTCTGCTGTCAAAACACCGATTTTTCTAACTAAAAATATGGAAGATGAAAAATTAAAAAGACG
TGTTGAGCGTAATTTAGCTAAAATGAACATTCCATCAACTACTTCCAAAGAAGCCTTTTATATTTTAGAATGTGAGGAAA
ATTATACTGAAAAACAAGACTTGAAAAACAATTCAAGAACTAGAATACTAGACATGACTGAAAAATTAGAAAAAGTAAAA
AATGGAGATTATAATGCCGAATAA

Upstream 100 bases:

>100_bases
TTTTTAAAGTATCATATTCTTGTAATGATTTATAAAACCGATTTTTACTTTTTCTAATAGATTTATATTAGTCAAAAATT
AATTATTTAAATAGATTAAA

Downstream 100 bases:

>100_bases
GGCATTTGTCCATTTTTTAATATGTATGCTTCATCCTTCGATGAACTGACAGTAGAAATAACTTTTATCAGATTTTTAGA
ACCGCCACCATGGTTTTTAC

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSYEKNARVINDDIFDLVNSCFEKERSSGNINSRCNFFDGNKDYFVLTDDGSYSINSKEINHKVETLHTSTGAISESFEK
FIKPMKFNYDEDLAILDICAGLGYNSSAAIADFIKNSSDSSLQIDMVEISKATLACGLLVPSPIPEHDITKKAIENELIK
QDYAGISYEKCKIPENIDINVYIEDARQTVQNLEDNYYDAIFLDPFSQNMAPELFSLDFFREFRRVIKDRGIIATYTSSA
PVRAGFIEAGFYVGQGPIFGRKQGGTLASPNPEVLDKSLPKNDEIRIALSDVGIPFRDPNLNNSSDFILDKRAEVRHDAR
HNTKISSAVKTPIFLTKNMEDEKLKRRVERNLAKMNIPSTTSKEAFYILECEENYTEKQDLKNNSRTRILDMTEKLEKVK
NGDYNAE

Sequences:

>Translated_407_residues
MSYEKNARVINDDIFDLVNSCFEKERSSGNINSRCNFFDGNKDYFVLTDDGSYSINSKEINHKVETLHTSTGAISESFEK
FIKPMKFNYDEDLAILDICAGLGYNSSAAIADFIKNSSDSSLQIDMVEISKATLACGLLVPSPIPEHDITKKAIENELIK
QDYAGISYEKCKIPENIDINVYIEDARQTVQNLEDNYYDAIFLDPFSQNMAPELFSLDFFREFRRVIKDRGIIATYTSSA
PVRAGFIEAGFYVGQGPIFGRKQGGTLASPNPEVLDKSLPKNDEIRIALSDVGIPFRDPNLNNSSDFILDKRAEVRHDAR
HNTKISSAVKTPIFLTKNMEDEKLKRRVERNLAKMNIPSTTSKEAFYILECEENYTEKQDLKNNSRTRILDMTEKLEKVK
NGDYNAE
>Mature_406_residues
SYEKNARVINDDIFDLVNSCFEKERSSGNINSRCNFFDGNKDYFVLTDDGSYSINSKEINHKVETLHTSTGAISESFEKF
IKPMKFNYDEDLAILDICAGLGYNSSAAIADFIKNSSDSSLQIDMVEISKATLACGLLVPSPIPEHDITKKAIENELIKQ
DYAGISYEKCKIPENIDINVYIEDARQTVQNLEDNYYDAIFLDPFSQNMAPELFSLDFFREFRRVIKDRGIIATYTSSAP
VRAGFIEAGFYVGQGPIFGRKQGGTLASPNPEVLDKSLPKNDEIRIALSDVGIPFRDPNLNNSSDFILDKRAEVRHDARH
NTKISSAVKTPIFLTKNMEDEKLKRRVERNLAKMNIPSTTSKEAFYILECEENYTEKQDLKNNSRTRILDMTEKLEKVKN
GDYNAE

Specific function: Unknown

COG id: COG4121

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008471 [H]

Pfam domain/function: PF05430 DUF752 [H]

EC number: NA

Molecular weight: Translated: 46137; Mature: 46006

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEKNARVINDDIFDLVNSCFEKERSSGNINSRCNFFDGNKDYFVLTDDGSYSINSKEI
CCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCEEECHHHH
NHKVETLHTSTGAISESFEKFIKPMKFNYDEDLAILDICAGLGYNSSAAIADFIKNSSDS
HHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCC
SLQIDMVEISKATLACGLLVPSPIPEHDITKKAIENELIKQDYAGISYEKCKIPENIDIN
CEEEEEEEHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
VYIEDARQTVQNLEDNYYDAIFLDPFSQNMAPELFSLDFFREFRRVIKDRGIIATYTSSA
EEEHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC
PVRAGFIEAGFYVGQGPIFGRKQGGTLASPNPEVLDKSLPKNDEIRIALSDVGIPFRDPN
CCEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCC
LNNSSDFILDKRAEVRHDARHNTKISSAVKTPIFLTKNMEDEKLKRRVERNLAKMNIPST
CCCCCCEEEECHHHHHHHHHCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCC
TSKEAFYILECEENYTEKQDLKNNSRTRILDMTEKLEKVKNGDYNAE
CCCCEEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SYEKNARVINDDIFDLVNSCFEKERSSGNINSRCNFFDGNKDYFVLTDDGSYSINSKEI
CCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCEEECHHHH
NHKVETLHTSTGAISESFEKFIKPMKFNYDEDLAILDICAGLGYNSSAAIADFIKNSSDS
HHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCC
SLQIDMVEISKATLACGLLVPSPIPEHDITKKAIENELIKQDYAGISYEKCKIPENIDIN
CEEEEEEEHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
VYIEDARQTVQNLEDNYYDAIFLDPFSQNMAPELFSLDFFREFRRVIKDRGIIATYTSSA
EEEHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC
PVRAGFIEAGFYVGQGPIFGRKQGGTLASPNPEVLDKSLPKNDEIRIALSDVGIPFRDPN
CCEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCC
LNNSSDFILDKRAEVRHDARHNTKISSAVKTPIFLTKNMEDEKLKRRVERNLAKMNIPST
CCCCCCEEEECHHHHHHHHHCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCC
TSKEAFYILECEENYTEKQDLKNNSRTRILDMTEKLEKVKNGDYNAE
CCCCEEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]