Click here to switch to the map view.

The map label for this gene is mvhB [H]

Identifier: 148643520

GI number: 148643520

Start: 1484584

End: 1485822

Strand: Reverse

Name: mvhB [H]

Synonym: Msm_1460

Alternate gene names: 148643520

Gene position: 1485822-1484584 (Counterclockwise)

Preceding gene: 148643521

Following gene: 148643519

Centisome position: 80.18

GC content: 35.03

Gene sequence:

>1239_bases
ATGATTATTTTTAATACTGACGATTGTATTAAATGTGAAGCCTGCGAAGGAATATGTCCTTCAAATGCTATAAAAGTACA
ACCTAATAACATAATTCACTGCGATACCTGTGGCGATTCCCCCAAATGTGCTGAAATATGTCCCAATGATGCATTAAAAG
TAGACTTTTTAACACTTGAAGAAGGTGGCGCCCAGCAAGCAAGATTAATTTTTAATGGCCTAAAATGTGATCAGTGCGGA
AAATGTGTAGAAACATGCCCTCAAAACACTATAACACTAACCAACAATCCTAAAATTCCTCTTGAAGGATTTTGTGTCAT
GTGTCAGCAATGTGTTGAAATATGTCCTTTGGATTATGTAGGAATTGAAGGCATTAAAGATCCAAATCATCGTGAACTCA
ATATTGAAGGACCGATTTATATTGAAAACTGTGTTGGGTGCGGAACCTGTATTGAAGAATGTCCTGTACAGGCAATCAGT
TTAAATGAACTTGGCGAACCAATAGAAATTAATTCTGAAATTTGCATTAAATGCGGTGTTTGTTCTCAAACCTGTCCATG
GAATGCAGTATTTATCTCTGAAAAAATTCCAACAAAAAGAACAAAAGAAATTACTGAGTTTAAACTAAATGAATCCTCAT
GTATAGGTTGTAAAACATGTGTTGAAATATGTCCCGGAGACTTTATTAAATTCAATACCAACAATCTAACAATAACTCTT
CCAAAAATGTGTGCAGCATGCGGTTTATGTGAAAAAATGTGTTCAGTAAATGCAATTTCATTAAATGTAAAACTCCATGA
CGCAACACCATGTACTGAAGAGGGAGTAGTTTGTGATGCAGAAAAATGTGACCATATCGGAGCATGTGCAATGAAATGTC
CTACACAAGCTATTCATGTGGTTACAAAAACAGGAATGTCCGTTCCGGAACAGATAAAAAGTGATGAAGACCCTTTATTT
AAAAGTTGTATACGCTGCGGAGCATGTGCATCATCTTGTCCGAATAATGCATTAACACTGGATACGGAATTTGAAATAAA
TAAAAATGGCACACTTATAAAAAGACCAAGAATACAATATAATCCATCAAAATGTGACCAATGTGGAGACTGTGTAAACA
GCTGCCCATATAATATGCTAAAAACAACAGATAATCCTAAACTTCCAATAGCAGGATTCTGTACATTATGTGGACAATGT
ATCGAAACATGTCCTGAAAAAGCTTTAAGTTACAAATAG

Upstream 100 bases:

>100_bases
TGCTTCAGAAGGTGAAAAATTCCAAAAAACAATGGAAGAATTTGAAAAAACAGTCAGCAAATTAGGTCCTTTGAATTTAG
AATAAAAAAGAGGTTTTGAA

Downstream 100 bases:

>100_bases
GTGTTAAACACCTATTCTTTTTTTATTTTAAACCTATTCAATTTTATTATATTACTCTTATTAAAAACATCTCTCCCAAT
TTATATAAATTTAATAATTC

Product: energy-converting hydrogenase B, subunit K, EhbK

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIIFNTDDCIKCEACEGICPSNAIKVQPNNIIHCDTCGDSPKCAEICPNDALKVDFLTLEEGGAQQARLIFNGLKCDQCG
KCVETCPQNTITLTNNPKIPLEGFCVMCQQCVEICPLDYVGIEGIKDPNHRELNIEGPIYIENCVGCGTCIEECPVQAIS
LNELGEPIEINSEICIKCGVCSQTCPWNAVFISEKIPTKRTKEITEFKLNESSCIGCKTCVEICPGDFIKFNTNNLTITL
PKMCAACGLCEKMCSVNAISLNVKLHDATPCTEEGVVCDAEKCDHIGACAMKCPTQAIHVVTKTGMSVPEQIKSDEDPLF
KSCIRCGACASSCPNNALTLDTEFEINKNGTLIKRPRIQYNPSKCDQCGDCVNSCPYNMLKTTDNPKLPIAGFCTLCGQC
IETCPEKALSYK

Sequences:

>Translated_412_residues
MIIFNTDDCIKCEACEGICPSNAIKVQPNNIIHCDTCGDSPKCAEICPNDALKVDFLTLEEGGAQQARLIFNGLKCDQCG
KCVETCPQNTITLTNNPKIPLEGFCVMCQQCVEICPLDYVGIEGIKDPNHRELNIEGPIYIENCVGCGTCIEECPVQAIS
LNELGEPIEINSEICIKCGVCSQTCPWNAVFISEKIPTKRTKEITEFKLNESSCIGCKTCVEICPGDFIKFNTNNLTITL
PKMCAACGLCEKMCSVNAISLNVKLHDATPCTEEGVVCDAEKCDHIGACAMKCPTQAIHVVTKTGMSVPEQIKSDEDPLF
KSCIRCGACASSCPNNALTLDTEFEINKNGTLIKRPRIQYNPSKCDQCGDCVNSCPYNMLKTTDNPKLPIAGFCTLCGQC
IETCPEKALSYK
>Mature_412_residues
MIIFNTDDCIKCEACEGICPSNAIKVQPNNIIHCDTCGDSPKCAEICPNDALKVDFLTLEEGGAQQARLIFNGLKCDQCG
KCVETCPQNTITLTNNPKIPLEGFCVMCQQCVEICPLDYVGIEGIKDPNHRELNIEGPIYIENCVGCGTCIEECPVQAIS
LNELGEPIEINSEICIKCGVCSQTCPWNAVFISEKIPTKRTKEITEFKLNESSCIGCKTCVEICPGDFIKFNTNNLTITL
PKMCAACGLCEKMCSVNAISLNVKLHDATPCTEEGVVCDAEKCDHIGACAMKCPTQAIHVVTKTGMSVPEQIKSDEDPLF
KSCIRCGACASSCPNNALTLDTEFEINKNGTLIKRPRIQYNPSKCDQCGDCVNSCPYNMLKTTDNPKLPIAGFCTLCGQC
IETCPEKALSYK

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 12 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001080
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 44808; Mature: 44808

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
13.6 %Cys+Met (Translated Protein)
11.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
13.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIFNTDDCIKCEACEGICPSNAIKVQPNNIIHCDTCGDSPKCAEICPNDALKVDFLTLE
CEEECCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEC
EGGAQQARLIFNGLKCDQCGKCVETCPQNTITLTNNPKIPLEGFCVMCQQCVEICPLDYV
CCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
GIEGIKDPNHRELNIEGPIYIENCVGCGTCIEECPVQAISLNELGEPIEINSEICIKCGV
CCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHCCCEEEEHHHCCCCEEECCCEEEEECC
CSQTCPWNAVFISEKIPTKRTKEITEFKLNESSCIGCKTCVEICPGDFIKFNTNNLTITL
CCCCCCCCEEEEECCCCCCHHHHHHHEECCCCCCCCHHHHHHHCCCCEEEEECCCEEEEH
PKMCAACGLCEKMCSVNAISLNVKLHDATPCTEEGVVCDAEKCDHIGACAMKCPTQAIHV
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEECHHHCCCCCHHHHHCCHHHEEH
VTKTGMSVPEQIKSDEDPLFKSCIRCGACASSCPNNALTLDTEFEINKNGTLIKRPRIQY
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCCCCC
NPSKCDQCGDCVNSCPYNMLKTTDNPKLPIAGFCTLCGQCIETCPEKALSYK
CCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIFNTDDCIKCEACEGICPSNAIKVQPNNIIHCDTCGDSPKCAEICPNDALKVDFLTLE
CEEECCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEC
EGGAQQARLIFNGLKCDQCGKCVETCPQNTITLTNNPKIPLEGFCVMCQQCVEICPLDYV
CCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
GIEGIKDPNHRELNIEGPIYIENCVGCGTCIEECPVQAISLNELGEPIEINSEICIKCGV
CCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHCCCEEEEHHHCCCCEEECCCEEEEECC
CSQTCPWNAVFISEKIPTKRTKEITEFKLNESSCIGCKTCVEICPGDFIKFNTNNLTITL
CCCCCCCCEEEEECCCCCCHHHHHHHEECCCCCCCCHHHHHHHCCCCEEEEECCCEEEEH
PKMCAACGLCEKMCSVNAISLNVKLHDATPCTEEGVVCDAEKCDHIGACAMKCPTQAIHV
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEECHHHCCCCCHHHHHCCHHHEEH
VTKTGMSVPEQIKSDEDPLFKSCIRCGACASSCPNNALTLDTEFEINKNGTLIKRPRIQY
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCCCCC
NPSKCDQCGDCVNSCPYNMLKTTDNPKLPIAGFCTLCGQCIETCPEKALSYK
CCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2654933; 9371463 [H]