| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643514
Identifier: 148643514
GI number: 148643514
Start: 1477908
End: 1479623
Strand: Reverse
Name: 148643514
Synonym: Msm_1454
Alternate gene names: NA
Gene position: 1479623-1477908 (Counterclockwise)
Preceding gene: 148643519
Following gene: 148643511
Centisome position: 79.84
GC content: 29.49
Gene sequence:
>1716_bases ATGAATGAAACTACCATATTAGTGTGGATTAATATTGCGATAGTCGGTATAATTGCCATAATTATCGTAAAACTGTATTT TAGAAAAGATGAATTAGAAAAAGACGACTCTCCTTTATTGTCAAAGGACAGTTTAAACAAATTAAGTCAATCCAGTGAAA ATAATTTATCAAAAACCGCACCCAATAAATCTTTTGTTTCAACATACTTCTCTAAACAAGACCAGCCTAAAGGTACTTCC TTAAGAAAACAAGGCCAAATACCGGAAGATAACTTCAATAGTTATATTGTTCCTGAAACCAACGAACATCTATTTTCCGA TAAATCAGAAAATGAAGAAGATCCTGCGAAACATATAAATTTTAATTATGAAACCAAAGTTCAAAAGTTTCAAGAACCAA TAAACGAAACCCAGATGGATATTATGAGTAAAAATAACAAAAACACCAAAAAAGAAATAAATGAAAATAATATTTCATTG GAAGAAAAACCAAAACATGAATTAAAAGATTTATTCAGTATCGACGAATTGATTAAAGAATCAAAAAGAAAAGATAGTAA AAGGGAAAAAGAATCTAAAACCATTAAAAAAGAAAAAGAAGATACTACAGAAATTAAAGAAAGTATCAAACAAAGAAAAG CAGGCAAAAAAGAAGACGATCCTATAACTGAAATCAAAAGTGAGTCCATTACTGAAACACCTGCTGAAAGTAAAGAAACT AATCTTTATGATGTTATTAATGATGCATCTAAAGATAAGACTGAAGAAAAACCAAGTGCTGAAGATATAACTAATGCAAT CAAAGCTGATGAAAAAGAGGACAAAACACCAAAAGATGAAAGTGTTGCAGAAGTTTTAGGCAAAGGTAAAAAAGAAGAAA GTGCTGACGTTTCAAAAGAAGACAATGTTAAAGATCTTTTAACTGAAGATAAAGAAGACAAAACACCTGATGAAGGAAAT GTTGCAGACGTTTTAGCTAACAATGATGAAATAAAAACACCAAGTTTAAAATCTCCAACTAAAATCAATTCAAAAGAAAA CGAATTAAGTGTTCTTCCAGCTGTTGAAGAAGATTATGAATTTGGAGCTCCATTAGAAGAATCTGAATTATTTAAAGATG AAGAAGAAACAGAAGAAAATGAATTAGGTGATTTAGATTACAGAAAAGATTTGGCTAAAATAACAAACTCCATTAAAAAT TCCAAAATATTTAATGAAGTAAAAGAAAAACTTGCTCCGGAAACCCCAATAACTGAAGAAAAACACATTGCAGATGAAAT GTATTTAAGAAATGTTGGCGCATACAATGAAGAACCTGCATTTCCGGAATATGAACCTATTGTAAATGAAAGACATGAAG ACTATCCTAGTGACTATGATTATCAGGAACAAAGTCCGGAACAATTACTAAGACAGGAAAATACCCGTAAAGTATTTAAC ATGGCTAAAAATTCCGAAACAGAAAACACACTTAGAATGAATGAATCTTCAGGTGCAAGCGACATTAAAATAAAAGAAAA ACCGGAAAAAAATAATCTTAAAATAAAAATAAACAATGATGAAGTAATTCTTCGTAAAGGTGCTGAAATCATCTTTAAAC ATGACGGTGAATCATATTCAAGTAAAGTCTATGGAATCAGAGGTAATGACATATCTGTAAAATACAGAGGTAAAAAAATT ACCATCAATTCAAAAGACATTAAAAAAATATATTAA
Upstream 100 bases:
>100_bases AAAATATAAAACTATATAATTATAAATAACTGATATATAATTATAAATAACTGATATATAATTATAAGTTATAAAATTTT AATAAGGAAGTGGAGAAAAA
Downstream 100 bases:
>100_bases AATAAGAAAAAATTTTTCTTATTTTTTTATTCATTTAACCTGTAACTTTCTTTTTCTACTATATATTTTGCTTTTCCTAT TTTTAATGAACGAATCATAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MNETTILVWINIAIVGIIAIIIVKLYFRKDELEKDDSPLLSKDSLNKLSQSSENNLSKTAPNKSFVSTYFSKQDQPKGTS LRKQGQIPEDNFNSYIVPETNEHLFSDKSENEEDPAKHINFNYETKVQKFQEPINETQMDIMSKNNKNTKKEINENNISL EEKPKHELKDLFSIDELIKESKRKDSKREKESKTIKKEKEDTTEIKESIKQRKAGKKEDDPITEIKSESITETPAESKET NLYDVINDASKDKTEEKPSAEDITNAIKADEKEDKTPKDESVAEVLGKGKKEESADVSKEDNVKDLLTEDKEDKTPDEGN VADVLANNDEIKTPSLKSPTKINSKENELSVLPAVEEDYEFGAPLEESELFKDEEETEENELGDLDYRKDLAKITNSIKN SKIFNEVKEKLAPETPITEEKHIADEMYLRNVGAYNEEPAFPEYEPIVNERHEDYPSDYDYQEQSPEQLLRQENTRKVFN MAKNSETENTLRMNESSGASDIKIKEKPEKNNLKIKINNDEVILRKGAEIIFKHDGESYSSKVYGIRGNDISVKYRGKKI TINSKDIKKIY
Sequences:
>Translated_571_residues MNETTILVWINIAIVGIIAIIIVKLYFRKDELEKDDSPLLSKDSLNKLSQSSENNLSKTAPNKSFVSTYFSKQDQPKGTS LRKQGQIPEDNFNSYIVPETNEHLFSDKSENEEDPAKHINFNYETKVQKFQEPINETQMDIMSKNNKNTKKEINENNISL EEKPKHELKDLFSIDELIKESKRKDSKREKESKTIKKEKEDTTEIKESIKQRKAGKKEDDPITEIKSESITETPAESKET NLYDVINDASKDKTEEKPSAEDITNAIKADEKEDKTPKDESVAEVLGKGKKEESADVSKEDNVKDLLTEDKEDKTPDEGN VADVLANNDEIKTPSLKSPTKINSKENELSVLPAVEEDYEFGAPLEESELFKDEEETEENELGDLDYRKDLAKITNSIKN SKIFNEVKEKLAPETPITEEKHIADEMYLRNVGAYNEEPAFPEYEPIVNERHEDYPSDYDYQEQSPEQLLRQENTRKVFN MAKNSETENTLRMNESSGASDIKIKEKPEKNNLKIKINNDEVILRKGAEIIFKHDGESYSSKVYGIRGNDISVKYRGKKI TINSKDIKKIY >Mature_571_residues MNETTILVWINIAIVGIIAIIIVKLYFRKDELEKDDSPLLSKDSLNKLSQSSENNLSKTAPNKSFVSTYFSKQDQPKGTS LRKQGQIPEDNFNSYIVPETNEHLFSDKSENEEDPAKHINFNYETKVQKFQEPINETQMDIMSKNNKNTKKEINENNISL EEKPKHELKDLFSIDELIKESKRKDSKREKESKTIKKEKEDTTEIKESIKQRKAGKKEDDPITEIKSESITETPAESKET NLYDVINDASKDKTEEKPSAEDITNAIKADEKEDKTPKDESVAEVLGKGKKEESADVSKEDNVKDLLTEDKEDKTPDEGN VADVLANNDEIKTPSLKSPTKINSKENELSVLPAVEEDYEFGAPLEESELFKDEEETEENELGDLDYRKDLAKITNSIKN SKIFNEVKEKLAPETPITEEKHIADEMYLRNVGAYNEEPAFPEYEPIVNERHEDYPSDYDYQEQSPEQLLRQENTRKVFN MAKNSETENTLRMNESSGASDIKIKEKPEKNNLKIKINNDEVILRKGAEIIFKHDGESYSSKVYGIRGNDISVKYRGKKI TINSKDIKKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65518; Mature: 65518
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETTILVWINIAIVGIIAIIIVKLYFRKDELEKDDSPLLSKDSLNKLSQSSENNLSKTA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHCC PNKSFVSTYFSKQDQPKGTSLRKQGQIPEDNFNSYIVPETNEHLFSDKSENEEDPAKHIN CCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEECCCCCHHHHCCCCCCCCCHHHHCC FNYETKVQKFQEPINETQMDIMSKNNKNTKKEINENNISLEEKPKHELKDLFSIDELIKE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SKRKDSKREKESKTIKKEKEDTTEIKESIKQRKAGKKEDDPITEIKSESITETPAESKET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC NLYDVINDASKDKTEEKPSAEDITNAIKADEKEDKTPKDESVAEVLGKGKKEESADVSKE CHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC DNVKDLLTEDKEDKTPDEGNVADVLANNDEIKTPSLKSPTKINSKENELSVLPAVEEDYE CCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC FGAPLEESELFKDEEETEENELGDLDYRKDLAKITNSIKNSKIFNEVKEKLAPETPITEE CCCCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH KHIADEMYLRNVGAYNEEPAFPEYEPIVNERHEDYPSDYDYQEQSPEQLLRQENTRKVFN HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAKNSETENTLRMNESSGASDIKIKEKPEKNNLKIKINNDEVILRKGAEIIFKHDGESYS HHHCCCCCHHEEECCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCC SKVYGIRGNDISVKYRGKKITINSKDIKKIY CEEEEECCCEEEEEECCCEEEECCHHHHHCC >Mature Secondary Structure MNETTILVWINIAIVGIIAIIIVKLYFRKDELEKDDSPLLSKDSLNKLSQSSENNLSKTA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHCC PNKSFVSTYFSKQDQPKGTSLRKQGQIPEDNFNSYIVPETNEHLFSDKSENEEDPAKHIN CCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEECCCCCHHHHCCCCCCCCCHHHHCC FNYETKVQKFQEPINETQMDIMSKNNKNTKKEINENNISLEEKPKHELKDLFSIDELIKE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SKRKDSKREKESKTIKKEKEDTTEIKESIKQRKAGKKEDDPITEIKSESITETPAESKET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC NLYDVINDASKDKTEEKPSAEDITNAIKADEKEDKTPKDESVAEVLGKGKKEESADVSKE CHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC DNVKDLLTEDKEDKTPDEGNVADVLANNDEIKTPSLKSPTKINSKENELSVLPAVEEDYE CCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC FGAPLEESELFKDEEETEENELGDLDYRKDLAKITNSIKNSKIFNEVKEKLAPETPITEE CCCCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH KHIADEMYLRNVGAYNEEPAFPEYEPIVNERHEDYPSDYDYQEQSPEQLLRQENTRKVFN HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAKNSETENTLRMNESSGASDIKIKEKPEKNNLKIKINNDEVILRKGAEIIFKHDGESYS HHHCCCCCHHEEECCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCC SKVYGIRGNDISVKYRGKKITINSKDIKKIY CEEEEECCCEEEEEECCCEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA